BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0817000 Os01g0817000|AK072492
(305 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09575.1 | chr1:3101851-3102832 REVERSE LENGTH=293 225 2e-59
AT1G57610.1 | chr1:21337449-21338412 REVERSE LENGTH=294 224 3e-59
AT2G23790.1 | chr2:10125692-10127455 REVERSE LENGTH=337 135 4e-32
AT4G36820.1 | chr4:17346889-17347994 FORWARD LENGTH=339 133 1e-31
AT5G66650.1 | chr5:26603204-26604257 REVERSE LENGTH=322 125 4e-29
AT5G42610.1 | chr5:17062507-17063934 FORWARD LENGTH=294 114 7e-26
>AT1G09575.1 | chr1:3101851-3102832 REVERSE LENGTH=293
Length = 292
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 152/242 (62%), Gaps = 7/242 (2%)
Query: 37 RRWVTPRELQRCWYASLPXXXXXVPGKDGEAEVTAEEARRLMRLANVEALKRKL---GDG 93
R W+ L+ C P + E+T EA++LMRL NVE +K+KL D
Sbjct: 22 RTWLGHGGLRSCVTVKTPSEDEEEK----KKEITIAEAKKLMRLVNVEDMKKKLVGVADR 77
Query: 94 EVIPYAELLXXXXXXXXXXXXXXXXXXXXXXXXXXVVLLFRDKVYLQPDKIVDLVRKAMP 153
+V+ Y+ LL VVL+FRDKVYL PDK+VDL+R+AMP
Sbjct: 78 DVVSYSTLLEASQGMGIARSPDEAHVFARVLDDAGVVLIFRDKVYLHPDKVVDLIRRAMP 137
Query: 154 LALTPEDDPRKEELKKLQTQLEDINKLAHKQVRRILWSGLGFLITQVGLFFRLTFWEFSW 213
L PE+D KEE KL+ E+I+ LAH+QVR+ILW GL + Q+GLFFRLTFWEFSW
Sbjct: 138 LDQNPEEDQIKEEFNKLRIMKEEIDVLAHRQVRKILWCGLATSMVQIGLFFRLTFWEFSW 197
Query: 214 DVMEPIXXXXXXXGLVVGYAYFLITSRDPTYRDFMERLFESRQKKLIQRQNFNLDRYLEL 273
DVMEPI G++VGYAYFL+TSRDPTY+DFM+RLF SRQ+KL++ F+ +R+ EL
Sbjct: 198 DVMEPITFFATATGIIVGYAYFLMTSRDPTYQDFMKRLFLSRQRKLLKSHKFDCERFKEL 257
Query: 274 QR 275
+R
Sbjct: 258 ER 259
>AT1G57610.1 | chr1:21337449-21338412 REVERSE LENGTH=294
Length = 293
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 150/219 (68%), Gaps = 3/219 (1%)
Query: 63 KDGEAEVTAEEARRLMRLANVEALKRKL---GDGEVIPYAELLXXXXXXXXXXXXXXXXX 119
+D + ++T EA++LMRL NVE +K+KL GD E++ Y L+
Sbjct: 40 EDEKKDMTVLEAKKLMRLVNVEDMKKKLIGMGDKEMVTYTTLIEASQGLGIARSLDEAHA 99
Query: 120 XXXXXXXXXVVLLFRDKVYLQPDKIVDLVRKAMPLALTPEDDPRKEELKKLQTQLEDINK 179
V+L+FRDKVYL P K+VDL+RKA+PL L P+D+ +EE K+++ E+I+
Sbjct: 100 FARVLDDAGVILIFRDKVYLHPHKVVDLIRKAVPLGLNPDDELIREEFDKMRSMKEEIDV 159
Query: 180 LAHKQVRRILWSGLGFLITQVGLFFRLTFWEFSWDVMEPIXXXXXXXGLVVGYAYFLITS 239
LAH+QVR+ILW GLG+ + Q+G+F RLTFWEFSWDVMEPI G++VGYAYFL+TS
Sbjct: 160 LAHQQVRKILWGGLGYSVVQIGIFVRLTFWEFSWDVMEPITFFTTATGIIVGYAYFLMTS 219
Query: 240 RDPTYRDFMERLFESRQKKLIQRQNFNLDRYLELQRRCK 278
RDPTY+DFM+RLF SRQ+KL++ F+ +R+ EL+ + K
Sbjct: 220 RDPTYQDFMKRLFLSRQRKLLKSHKFDAERFKELENKWK 258
>AT2G23790.1 | chr2:10125692-10127455 REVERSE LENGTH=337
Length = 336
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 6/219 (2%)
Query: 66 EAEVTAEEARRLMRLANVEALKRKLGDG--EVIPYAELLXXXXXXXXXXXXXXXXXXXXX 123
E +T + ++L+R A +E +K KL + +PY E +
Sbjct: 107 ETSLTVADTKKLLRAAQIEIVKSKLRETGRSWMPYKEFVSVCGEASSDPDLGSKIAKMLD 166
Query: 124 XXXXXVVLLFRDKVYLQPDKIVDLVRKAMPL-ALTPEDDPRKEELKKLQTQLEDINKLAH 182
+VL D V ++PD++ + +PL + +DPR+ E K+L+ + I+ AH
Sbjct: 167 DSANVIVL--GDSVCIRPDQVTKSIEGLLPLPKIHNPNDPRRIEFKELEAEKAVIDVKAH 224
Query: 183 KQVRRILWSGLGFLITQVGLFFRLTFWEFSWDVMEPIXXXXXXXGLVVGYAYFLITSRDP 242
VR+ LW+GLG+LI Q F RLTFWE SWDVMEPI + GYA+FL TS++P
Sbjct: 225 TLVRKELWAGLGYLILQTAGFMRLTFWELSWDVMEPICFYVTSVYFMAGYAFFLRTSKEP 284
Query: 243 TYRDFMERLFESRQKKLIQRQNFNLDRYLELQRR-CKGP 280
++ F + FE++Q+KL+ F+L+RY EL++ C P
Sbjct: 285 SFEGFYQSRFEAKQRKLMNEYEFDLERYNELKKLFCSKP 323
>AT4G36820.1 | chr4:17346889-17347994 FORWARD LENGTH=339
Length = 338
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 130/229 (56%), Gaps = 9/229 (3%)
Query: 69 VTAEEARRLMRLANVEALKRKLGD-GEV-IPYAELLXXXXXXXXXXXXXXXXXXXXXXXX 126
+T ++ ++L+R A +E +K KL + G++ I Y++ L
Sbjct: 112 LTVQDVKKLLRAAEIEVIKTKLMETGKIWIRYSDFLGVCSDSSLDPSQGALIAKMLDDSG 171
Query: 127 XXVVLLFRDKVYLQPDKIVDLVRKAMPLA-LTPEDDPRKEELKKLQTQLEDINKLAHKQV 185
+V+ + V L+P ++ + +PL+ + +DPR++EL +L+ I++ AH V
Sbjct: 172 NVIVM--GNSVCLRPHQLTKSIEGLLPLSQIHNPNDPRRKELNELEAIKTVIDQKAHSLV 229
Query: 186 RRILWSGLGFLITQVGLFFRLTFWEFSWDVMEPIXXXXXXXGLVVGYAYFLITSRDPTYR 245
RR LW+GLG+LI Q F RLTFW+ +WDVMEPI + GY +FL TSR+P+++
Sbjct: 230 RRELWAGLGYLIIQTAGFMRLTFWDLTWDVMEPICFYVSSVYFMAGYTFFLKTSREPSFQ 289
Query: 246 DFMERLFESRQKKLIQRQNFNLDRYLELQR----RCKGPLEKMCGTNQT 290
F + FE++Q+KL+Q ++F++ RY EL++ + G + K+ G+ Q
Sbjct: 290 GFYQSRFEAKQRKLMQSEDFDVGRYDELKKLFNPKPSGAVPKILGSLQN 338
>AT5G66650.1 | chr5:26603204-26604257 REVERSE LENGTH=322
Length = 321
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 4/217 (1%)
Query: 69 VTAEEARRLMRLANVEALKRKLGD--GEVIPYAELLXXXXXXXXXXXXXXXXXXXXXXXX 126
VT E+ ++LMR A +E +K KL + +PY+E +
Sbjct: 103 VTVEDVKKLMRAAEMELVKSKLREIGKNWVPYSEFVRVCGEYSSDPEQGNRVANMLDEAG 162
Query: 127 XXVVLLFRDKVYLQPDKIVDLVRKAMPLALTPEDDPRKEELKKLQTQLEDINKLAHKQVR 186
+VL V L+P+++ + +P D ++E ++L+ DI+K A VR
Sbjct: 163 NVIVL--GKLVCLKPEELTSAMAGLIPTLEPSLDAETRQEFEQLEIIKSDIDKRADDLVR 220
Query: 187 RILWSGLGFLITQVGLFFRLTFWEFSWDVMEPIXXXXXXXGLVVGYAYFLITSRDPTYRD 246
+ LW+GLG ++ Q FFRLTFWE SWDVMEPI + GYA+FL TS++P++
Sbjct: 221 KELWAGLGLIMAQTVGFFRLTFWELSWDVMEPICFYVTSTYFMAGYAFFLRTSKEPSFEG 280
Query: 247 FMERLFESRQKKLIQRQNFNLDRYLELQRRCKGPLEK 283
F + FE++QK+LI+ +F++DR+ +LQ+ + L K
Sbjct: 281 FYKSRFETKQKRLIKMLDFDIDRFTKLQKMHRPNLTK 317
>AT5G42610.1 | chr5:17062507-17063934 FORWARD LENGTH=294
Length = 293
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 69 VTAEEARRLMRLANVEALKRKLGD--GEVIPYAELLXXXXXXXXXXXXXXXXXXXXXXXX 126
++ E ++L+RL +E +K +L + + Y E +
Sbjct: 74 LSVSETKKLLRLYQMEKVKERLREIPKSSVSYWEFIQICCESCGNDEQGSQMAKSLDHSG 133
Query: 127 XXVVLLFRDKVYLQPDKIVDLVRKAMPLALTPEDDPRKEELKKLQTQLEDINKLAHKQVR 186
VVL D V+L P +I + + +DPRKEEL +L T + I+ A + V+
Sbjct: 134 CVVVL--GDIVFLHPHQIAKSMEAMIKQTSVLPNDPRKEELVQLATTKKSIDIEARRIVQ 191
Query: 187 RILWSGLGFLITQVGLFFRLTFWEFSWDVMEPIXXXXXXXGLVVGYAYFLITSRDPTYRD 246
L+ GLGFL Q F RLTFWE SWDVMEPI ++GY +FL TS +P++
Sbjct: 192 AELYCGLGFLAVQTIGFMRLTFWELSWDVMEPICFFVTTIHFILGYIFFLRTSTEPSFEG 251
Query: 247 FMERLFESRQKKLIQRQNFNLDRYLELQ 274
+ F+++QKKL++R F+ RY EL
Sbjct: 252 LFRQRFKTKQKKLMERHGFDFLRYNELN 279
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.140 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,293,046
Number of extensions: 182378
Number of successful extensions: 688
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 685
Number of HSP's successfully gapped: 6
Length of query: 305
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 207
Effective length of database: 8,419,801
Effective search space: 1742898807
Effective search space used: 1742898807
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 111 (47.4 bits)