BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0815700 Os01g0815700|AK073519
(950 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17790.1 | chr5:5869810-5872671 REVERSE LENGTH=759 382 e-106
AT1G55040.1 | chr1:20534895-20538901 FORWARD LENGTH=850 131 1e-30
AT1G70650.1 | chr1:26638158-26640126 FORWARD LENGTH=467 106 7e-23
AT1G48570.1 | chr1:17955455-17957661 REVERSE LENGTH=456 104 2e-22
>AT5G17790.1 | chr5:5869810-5872671 REVERSE LENGTH=759
Length = 758
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 322/566 (56%), Gaps = 68/566 (12%)
Query: 77 FPEWSRLVDRLSAAGYGARAPSPAD-ELDLDPECGLSSDAEAAVSSFLAFAXXXXXXXXX 135
PEW+ L+ LS AGY + + S + E + P G + + LA A
Sbjct: 92 LPEWTELLQSLSKAGYFSDSGSISGLESEFFP--GFPDELLRPALACLALARERPELLEM 149
Query: 136 XXXKDVEVLVANAAPALFKDGEAS----ELRLRQYLAGEGSDVTQSERAETIDIVRYLLS 191
+DVEVLV N P LFK G S L LR L G G + E+A T+D++R +LS
Sbjct: 150 LSRRDVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGK-LMDMEKASTVDLMRLILS 208
Query: 192 YAY---GSPVSYLKDKELTDSAVRNILAEFVSFSGFPQTSSYAESTARQ----NTLGSRP 244
Y S S +KE+ +S+VR++L++ S P S+ ++ Q + G R
Sbjct: 209 YVVDVASSEESKQHNKEIMESSVRSLLSQIAKMSLRPPESNVHDTMQNQYSDRDGQGVRS 268
Query: 245 PGQNIEMKRGDWICTRCSFMNFARNARCLECNEHRPKKMLTGGEWECPQCVYYNYGRNMS 304
N+EMKRGDWIC+RCS MNFARN +C +C+E RPK+ LTG EWECPQC +YNYGRN++
Sbjct: 269 FQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQCDFYNYGRNVA 328
Query: 305 CLRCSCKRPGTIPPNPAGAGLDGVAQFLNTSIVGKSEIERKLAENDQKAERWLNKVSQXX 364
CLRC CKRP N A N+ E+ER+L EN++KA+RWL+KV+Q
Sbjct: 329 CLRCDCKRPRDSSLNSA-----------NSDYSSDPELERRLVENEKKAQRWLSKVAQ-- 375
Query: 365 XXXXXXXXXXXEDFPEIMPIRKGVNKFVVSTRKTPLERRLANAQYSSNNSPQDGSSD--- 421
EDFPEIMP+RKGVN++VVSTRK PLERRLAN + N DG+S
Sbjct: 376 GGSDANSVDTDEDFPEIMPLRKGVNRYVVSTRKPPLERRLANTE---NRVATDGNSKRSD 432
Query: 422 -----SKISKTLDRILGRSTSTSVQNNQSGDGDVNTSSNKTTSNLG-GIDPVPFVPLSAD 475
SK +++L+ ILG S+S + +++ D N SS + S+ G D VPFVPL +D
Sbjct: 433 DNALGSKTTRSLNEILGSSSSLTSRSD-----DKNVSSRRFESSQGINTDFVPFVPLPSD 487
Query: 476 QFA-KPQ-------------NSFGDGQSDTQISTEADS-MAKSQMDSMERRDDKRSFDTT 520
FA KP+ + F G + ++D+ + + D +E+ D K +
Sbjct: 488 MFAKKPKEETQIGLIDNIQVDGFSGGNQNVYQEDKSDANHSGKETDRLEKEDHKS--EEP 545
Query: 521 EEWSKKVAELSNVKDFPSAISDQDFPEIMPMRKGENRFVISKKKDRSLTSPQYKRRSVLE 580
W K+V EL NV D SAI + PE MPMRKGENRFV+S+KKDRSLTSP YKR
Sbjct: 546 ARWFKRVTELHNVSDLESAIPQEISPEKMPMRKGENRFVVSRKKDRSLTSPAYKR----- 600
Query: 581 HADNSNFIPFVPFPPDYFAKKNKPVE 606
++S+F+PFVPFPPDYFAK+ +P E
Sbjct: 601 -PEDSDFVPFVPFPPDYFAKEKQPKE 625
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 79/89 (88%)
Query: 857 GKSLEGSAVKDPDPLDMSEEAKAERWFRRAAQIKDISELANIPDEDFPEIMPMRKGVNRF 916
GKSLEGS VK+ D LDMSEEAKAERWF+R A+IK+ISEL+ IPDEDFP IMPMRKGVNRF
Sbjct: 664 GKSLEGSLVKESDLLDMSEEAKAERWFKRVAEIKNISELSEIPDEDFPSIMPMRKGVNRF 723
Query: 917 VVSKRKTPLERRLTSPQYRRNLPIVSSEP 945
VVSKRKTPLERRLTS +++RN I +S+P
Sbjct: 724 VVSKRKTPLERRLTSQRHQRNPHITNSDP 752
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 113/271 (41%), Gaps = 85/271 (31%)
Query: 345 KLAENDQKAE---RWLNKVSQXXXXXXXXXXXXXEDFPEIMPIRKGVNKFVVSTRKTPLE 401
+L + D K+E RW +V++ E PE MP+RKG N+FVVS +K +
Sbjct: 534 RLEKEDHKSEEPARWFKRVTELHNVSDLESAIPQEISPEKMPMRKGENRFVVSRKK---D 590
Query: 402 RRLANAQYSSNNSPQDGSSDSKISKTLDRILGRSTSTSVQNNQSGDGDVNTSSNKTTSNL 461
R L + Y P+D
Sbjct: 591 RSLTSPAY---KRPEDS------------------------------------------- 604
Query: 462 GGIDPVPFVPLSADQFAK---PQNSFG--------DGQSDTQISTEADSMAKSQMDSMER 510
D VPFVP D FAK P+ S + Q S+ KS +++
Sbjct: 605 ---DFVPFVPFPPDYFAKEKQPKESIDTLPAPATENVSQVVQQEPREPSINKSDTVAVKI 661
Query: 511 RDDKRS----------FDTTEE-----WSKKVAELSNVKDFPSAISDQDFPEIMPMRKGE 555
R+ K D +EE W K+VAE+ N+ + S I D+DFP IMPMRKG
Sbjct: 662 RNGKSLEGSLVKESDLLDMSEEAKAERWFKRVAEIKNISEL-SEIPDEDFPSIMPMRKGV 720
Query: 556 NRFVISKKK---DRSLTSPQYKRRSVLEHAD 583
NRFV+SK+K +R LTS +++R + ++D
Sbjct: 721 NRFVVSKRKTPLERRLTSQRHQRNPHITNSD 751
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 876 EAKAERWFRRAAQIKDISELANIPDEDFPEIMPMRKGVNRFVVSKRKTPLERRLTSPQYR 935
E KA+RW + AQ + + DEDFPEIMP+RKGVNR+VVS RK PLERRL + + R
Sbjct: 363 EKKAQRWLSKVAQGGSDANSVDT-DEDFPEIMPLRKGVNRYVVSTRKPPLERRLANTENR 421
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 332 LNTSIVGKSEIERKLAENDQKAERWLNKVSQXXXXXXXXXXXXXEDFPEIMPIRKGVNKF 391
L S+V +S++ ++E + KAERW +V++ EDFP IMP+RKGVN+F
Sbjct: 667 LEGSLVKESDL-LDMSE-EAKAERWFKRVAEIKNISELSEIPD-EDFPSIMPMRKGVNRF 723
Query: 392 VVSTRKTPLERRLANAQYSSN 412
VVS RKTPLERRL + ++ N
Sbjct: 724 VVSKRKTPLERRLTSQRHQRN 744
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 10/101 (9%)
Query: 840 QTAGYSSYGESANRGYTGKSLEGSAVKDPDPLDMSEEAKAE---RWFRRAAQIKDISELA 896
Q G+S G + N KS + K+ D L+ E+ K+E RWF+R ++ ++S+L
Sbjct: 506 QVDGFS--GGNQNVYQEDKSDANHSGKETDRLE-KEDHKSEEPARWFKRVTELHNVSDLE 562
Query: 897 N-IPDEDFPEIMPMRKGVNRFVVSKRKTPLERRLTSPQYRR 936
+ IP E PE MPMRKG NRFVVS++K +R LTSP Y+R
Sbjct: 563 SAIPQEISPEKMPMRKGENRFVVSRKK---DRSLTSPAYKR 600
>AT1G55040.1 | chr1:20534895-20538901 FORWARD LENGTH=850
Length = 849
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 49/287 (17%)
Query: 76 PFPEWSRLVDRLSAAGY-----GARAPSPADELDLD-PECGLSSDAEAAVSSFLAFAXXX 129
P+PEW L++RL Y + L +D GL D V+ F F
Sbjct: 148 PWPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGEDENVGVALFQDFRAVQ 207
Query: 130 XXXXXXXXXK----------DVEVLVANAAPALFKDGEASELRLRQYLAGEGSDVTQS-- 177
+ D+++LV + PA + S LR+ + + DV S
Sbjct: 208 NACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSSCS 267
Query: 178 ---------------ERAETIDIVRYLLSYAYGSPVS------YLKDKELTDSAVRNILA 216
+ A TID++R L +Y + P++ L K+ S VR +L
Sbjct: 268 LRNSCEKAFLLTNKEDEARTIDLMRILFTYGF-DPLNGTVANKSLLKKKSVKSVVRKLLH 326
Query: 217 EFVSFSGFPQTSSYAESTARQN---------TLGSRPPGQNIEMKRGDWICTRCSFMNFA 267
E V S P + ++ T R ++EMK+GDW+C +C FMNFA
Sbjct: 327 EIVKLSAVPIDPNLTPPVIKRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPKCDFMNFA 386
Query: 268 RNARCLECNEHRPKKMLTGGEWECPQCVYYNYGRNMSCLRCSCKRPG 314
+N CL+C+ RPK+ L GEWECP+C + NY RNM+C C CKRP
Sbjct: 387 KNTICLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCDCKRPA 433
>AT1G70650.1 | chr1:26638158-26640126 FORWARD LENGTH=467
Length = 466
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 136/314 (43%), Gaps = 54/314 (17%)
Query: 76 PFPEWSRLVDRLSAAGYGARAPSPADELDLDPECGLSSDAEAAVSSFLAFAXXXXXXXXX 135
P+PEW L+ L+ GY + P S ++ ++ L FA
Sbjct: 45 PWPEWLDLMGMLAKKGYFEESLIPLMS---------SKESNHIRTACLNFARHRFTLVRN 95
Query: 136 XXXKDVEVLVANAAPALFKDGEASELRLRQYLAGEGSDVTQS-----------------E 178
KD++V+ P+ + S RLR Y+ + +V S E
Sbjct: 96 LSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDE 155
Query: 179 RAETIDIVRYLLSYAYGSPVSYLKDK----ELTDSAVRNILAEFVSFSGFPQTSSYAEST 234
A TID++R LL+Y S ++++ +L + +VR +L E V++S S+ E+
Sbjct: 156 GARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDFESAETETA 215
Query: 235 ARQNTLGSRPPGQNIE----MKR-GDWICTRCSFMNFARNARCLECN---EHRPKKM--- 283
+ +P Q+I+ KR GDW CT C F+NFA+N RCL C+ E R K++
Sbjct: 216 GDE----LQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEE 271
Query: 284 ------LTGGEWECPQCVYYNYGRNMSCLRCSCKRPGTIPPNPAGAGLDGV--AQFLNTS 335
L G+W C C + N+ +N CLRC +P NP + F S
Sbjct: 272 QKDHLPLKKGDWICQTCNFLNFSKNTRCLRCK-DKPTLRQINPGEWECESCNYINFRRNS 330
Query: 336 IVGKSEIERKLAEN 349
I K + +R+ A N
Sbjct: 331 ICLKCDHKRQKAAN 344
>AT1G48570.1 | chr1:17955455-17957661 REVERSE LENGTH=456
Length = 455
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 122/313 (38%), Gaps = 84/313 (26%)
Query: 76 PFPEWSRLVDRLSAAGYGARAPSPADELDLDPECGLSSDAEAAVSSFLAFAXXXXXXXXX 135
P+PEW VDRL GY + ++ + E L DA L+FA
Sbjct: 61 PWPEWITFVDRLKTKGYFTKD---TEDDTVYQEMILVKDA------CLSFARDRYDVLRS 111
Query: 136 XXXKDVEVLVANAAPALFKDGEASELRLRQYLAGEGSDVTQS------------------ 177
DV+ LV P LF+ S R+R ++ DV S
Sbjct: 112 LSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSCDRAYVILKDTE 171
Query: 178 ERAETIDIVRYLLSYAYGSPVSYLKD----KELTDSAVRNILAEFVSFSGFPQTSSYAES 233
A T+D++R LL A S V + KEL + R +L E V FS P + +
Sbjct: 172 ADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEFSEKPLIPALPKP 231
Query: 234 TARQNTLGSRP----------------------PGQNIEMKR------------------ 253
++++++L S+ P Q + K
Sbjct: 232 SSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFKSRNDEPSHRVAFKSRNDES 291
Query: 254 ---------GDWICTRCSFMNFARNARCLECNE---HRP-KKMLTGGEWECPQCVYYNYG 300
DW C +C F+NFARN RC ECNE RP ++ G+W CP+C + N+
Sbjct: 292 SQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRPVAAVVKEGDWLCPECSFLNFT 351
Query: 301 RNMSCLRCSCKRP 313
RN SCL+C K P
Sbjct: 352 RNQSCLKCKAKGP 364
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 228 SSYAESTARQNTLGSRPPGQN-------IEMKRGDWICTRCSFMNFARNARCLECNEHRP 280
S+ T Q+ L + G +EMK+GDW CT C +MNFA N +C EC E R
Sbjct: 345 CSFLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCRECREQRH 404
Query: 281 KKMLTGGEWECPQCVYYNYGRNMSCLRCSCKRPG 314
K + G+WECP C + N+ RN +C +C CKRP
Sbjct: 405 KTLAEPGDWECPSCDFVNFRRNDACKKCECKRPS 438
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 216 AEFVSFSGFPQTSSYAESTARQNTLGSRPPGQNIEMKRGDWICTRCSFMNFARNARCLEC 275
+FV+F+ E N + R P + +K GDW+C CSF+NF RN CL+C
Sbjct: 308 CDFVNFAR-------NERCRECNEVADRRPVAAV-VKEGDWLCPECSFLNFTRNQSCLKC 359
Query: 276 NEHRPKKM-------LTGGEWECPQCVYYNYGRNMSCLRCSCKRPGTI--PPNPAGAGLD 326
PKK + G+W C C Y N+ N C C +R T+ P + D
Sbjct: 360 KAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCRECREQRHKTLAEPGDWECPSCD 419
Query: 327 GVAQFLNTSIVGKSEIER-KLAENDQKAERW 356
V F K E +R A NDQ+ W
Sbjct: 420 FV-NFRRNDACKKCECKRPSQANNDQEDHTW 449
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,504,071
Number of extensions: 771050
Number of successful extensions: 2117
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2102
Number of HSP's successfully gapped: 13
Length of query: 950
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 842
Effective length of database: 8,145,641
Effective search space: 6858629722
Effective search space used: 6858629722
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 116 (49.3 bits)