BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0814900 Os01g0814900|AK071859
         (279 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17770.1  | chr5:5864543-5866495 REVERSE LENGTH=282            428   e-120
AT5G20080.1  | chr5:6782708-6786360 FORWARD LENGTH=329            216   2e-56
AT1G37130.1  | chr1:14158617-14161652 FORWARD LENGTH=918          175   2e-44
AT1G77760.1  | chr1:29236005-29239367 REVERSE LENGTH=918          175   3e-44

>AT5G17770.1 | chr5:5864543-5866495 REVERSE LENGTH=282
          Length = 281

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 197/252 (78%), Positives = 227/252 (90%)

Query: 28  FLLLRSRKPKGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCRGQ 87
           + L  S+K + CLDPENFK+FKLV++ Q+SHNVA+F F LPT TSVLGLPIGQHISCRG+
Sbjct: 30  YFLTSSKKRRVCLDPENFKEFKLVKRHQLSHNVAKFVFELPTSTSVLGLPIGQHISCRGK 89

Query: 88  DATGEEVIKPYTPTTLDSDLGHFELVIKMYPQGRMSHHFREMKVGDYMSVKGPKGRFRYQ 147
           D  GE+VIKPYTPTTLDSD+G FELVIKMYPQGRMSHHFREM+VGD+++VKGPKGRF+YQ
Sbjct: 90  DGQGEDVIKPYTPTTLDSDVGRFELVIKMYPQGRMSHHFREMRVGDHLAVKGPKGRFKYQ 149

Query: 148 VGQVRAFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANVTHDDILLKEELDNMAKT 207
            GQ RAFGMLAGGSGITPMFQVARAILENP D TKVHL+YANVT+DDILLKEEL+ +   
Sbjct: 150 PGQFRAFGMLAGGSGITPMFQVARAILENPTDKTKVHLIYANVTYDDILLKEELEGLTTN 209

Query: 208 YPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQILRCGPPPMNKAMAAHLD 267
           YP++FKI+YVLNQPPEVW+GGVGFVS++MI+ H PAPA DIQILRCGPPPMNKAMAA+L+
Sbjct: 210 YPEQFKIFYVLNQPPEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAANLE 269

Query: 268 ELGYTKEMQFQF 279
            LGY+ EMQFQF
Sbjct: 270 ALGYSPEMQFQF 281



>AT5G20080.1 | chr5:6782708-6786360 FORWARD LENGTH=329
          Length = 328

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 165/262 (62%), Gaps = 20/262 (7%)

Query: 36  PKGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCR---GQDATGE 92
           PK  L+P+ + +FKL +  ++SHN   F+F+   P++ LGL +   +  R   G +A G+
Sbjct: 69  PKTALNPDKWLEFKLQDTARVSHNTQLFRFSF-DPSAELGLHVASCLLTRAPLGYNAEGK 127

Query: 93  E--VIKPYTPTTLDSDLGHFELVIKMYPQGRMSHHFREMKVGDYMSVKGPKGRFRYQVGQ 150
              VI+PYTP +     G+F+L+IK+YP G+MS HF  +K GD + VKGP  +F+Y    
Sbjct: 128 TKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNM 187

Query: 151 VRAFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANVTHDDILLKEELDNMAKTYPD 210
            +  GM+AGGSGITPM QV  AI++NP D T++ L+YANV+ DDILLK++LD +   +P+
Sbjct: 188 KKHIGMIAGGSGITPMLQVIDAIVKNPEDNTQISLLYANVSPDDILLKQKLDVLQANHPN 247

Query: 211 RFKIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQILRCGPPPMNKAMAAH----- 265
             KI+Y ++ P + W GGVG++S+DM    LP P +D  IL CGPP M + ++       
Sbjct: 248 -LKIFYTVDNPTKNWKGGVGYISKDMALKGLPLPTDDTLILVCGPPGMMEHISGGKAPDW 306

Query: 266 --------LDELGYTKEMQFQF 279
                   L ELGYT+EM F+F
Sbjct: 307 SQGEVKGILKELGYTEEMVFKF 328



>AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918
          Length = 917

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 155/260 (59%), Gaps = 24/260 (9%)

Query: 40  LDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHISCRGQDATGEEVIKPYT 99
           ++P      +LVEK  ISH+V +F+FALP    VLGLP+G+HI         +  ++ YT
Sbjct: 657 VNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCAT-INDKLCLRAYT 715

Query: 100 PTTLDSDLGHFELVIKMY-----PQ----GRMSHHFREMKVGDYMSVKGPKGRFRYQVGQ 150
           P++    +G+FELV+K+Y     P+    G MS +   + +G  + +KGP G   Y +G+
Sbjct: 716 PSSTVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEY-LGK 774

Query: 151 -----------VRAFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANVTHDDILLKE 199
                           MLAGG+GITP++Q+ +AIL++P D T+++++YAN T +DILL+E
Sbjct: 775 GSFTVHGKPKFADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDILLRE 834

Query: 200 ELDNMAKTYPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQI-LRCGPPPM 258
           ELD  A+ YPDR K++YV+    E W    GF+S+ +++ H+P   +   + + CGPPPM
Sbjct: 835 ELDGWAEQYPDRLKVWYVVESAKEGWAYSTGFISEAIMREHIPDGLDGSALAMACGPPPM 894

Query: 259 NK-AMAAHLDELGYTKEMQF 277
            + A+  +L+++ Y  +  F
Sbjct: 895 IQFAVQPNLEKMQYNIKEDF 914



>AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918
          Length = 917

 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 156/264 (59%), Gaps = 24/264 (9%)

Query: 31  LRSRKPKGCLDPENFKKFKLVEKKQISHNVARFKFALPTPTSVLGLPIGQHI-SCRGQDA 89
           L  +K    ++P      +L+EK  ISH+V +F+FALP+    LGLP+G+H+  C   + 
Sbjct: 648 LTPQKNIALVNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVC--ANI 705

Query: 90  TGEEVIKPYTPTTLDSDLGHFELVIKMYPQ---------GRMSHHFREMKVGDYMSVKGP 140
             +  ++ YTPT+    +GH +LV+K+Y +         G MS H   + +G  + +KGP
Sbjct: 706 NDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGP 765

Query: 141 KGRFRYQ-------VGQ---VRAFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANV 190
            G   Y+        G+    +   MLAGG+GITP++Q+ ++IL +P D T++++VYAN 
Sbjct: 766 LGHIEYKGKGNFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSILSDPEDETEMYVVYANR 825

Query: 191 THDDILLKEELDNMAKTYPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQI 250
           T DDIL++EEL+  A  + +R KI+YV+    E W+   GF+++ +++ H+P   E   +
Sbjct: 826 TEDDILVREELEGWASKHKERLKIWYVVEIAKEGWSYSTGFITEAVLREHIPEGLEGESL 885

Query: 251 -LRCGPPPMNK-AMAAHLDELGYT 272
            L CGPPPM + A+  +L+++GY 
Sbjct: 886 ALACGPPPMIQFALQPNLEKMGYN 909



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.139    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,185,281
Number of extensions: 266046
Number of successful extensions: 559
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 548
Number of HSP's successfully gapped: 4
Length of query: 279
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 182
Effective length of database: 8,447,217
Effective search space: 1537393494
Effective search space used: 1537393494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)