BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0813100 Os01g0813100|Os01g0813100
(345 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56850.1 | chr3:21046554-21047894 REVERSE LENGTH=298 225 3e-59
AT2G41070.1 | chr2:17131249-17132208 FORWARD LENGTH=263 199 2e-51
AT1G49720.2 | chr1:18400826-18402362 FORWARD LENGTH=404 137 1e-32
AT3G44460.1 | chr3:16080115-16081722 REVERSE LENGTH=332 114 5e-26
AT4G35900.1 | chr4:17004746-17005952 FORWARD LENGTH=286 86 2e-17
AT3G19290.3 | chr3:6687956-6689784 FORWARD LENGTH=433 86 3e-17
AT1G45249.3 | chr1:17165420-17167415 REVERSE LENGTH=428 83 2e-16
AT2G36270.1 | chr2:15204980-15206571 REVERSE LENGTH=443 78 7e-15
AT2G17770.2 | chr2:7723103-7723951 FORWARD LENGTH=196 77 1e-14
AT4G34000.1 | chr4:16296008-16297971 FORWARD LENGTH=455 74 9e-14
AT5G42910.1 | chr5:17203908-17205211 FORWARD LENGTH=371 73 3e-13
AT1G03970.1 | chr1:1018237-1019049 FORWARD LENGTH=271 66 2e-11
AT5G44080.1 | chr5:17738787-17739734 REVERSE LENGTH=316 66 3e-11
AT4G37730.1 | chr4:17723800-17724717 FORWARD LENGTH=306 51 1e-06
AT1G13600.1 | chr1:4650787-4651377 REVERSE LENGTH=197 49 5e-06
AT2G46270.1 | chr2:19000859-19002901 FORWARD LENGTH=383 48 6e-06
>AT3G56850.1 | chr3:21046554-21047894 REVERSE LENGTH=298
Length = 297
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 155/325 (47%), Positives = 196/325 (60%), Gaps = 62/325 (19%)
Query: 33 YSLTLDEVQSQLG---EPLHSMNLDELLRSVF------PDGLAIADGAGATTSSQQHQPG 83
YSLTLDEVQ+ LG + L SMNLDELL+SV P +A+ GA A
Sbjct: 23 YSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNGGAAAQ--------- 73
Query: 84 SGLLRQGSITMPPELSKKTVDEVWKGIQAAPKRNAETXXXXXXXXXXXERQPTLGEVTLE 143
GL RQGS+T+P +LSKKTVDEVWK IQ +N + ++QPTLGE+TLE
Sbjct: 74 EGLSRQGSLTLPRDLSKKTVDEVWKDIQQ--NKNGGSAHERR------DKQPTLGEMTLE 125
Query: 144 DFLVKAGVVTQGSLKELSDVGNVDPVGRGVTATGTVDLAPGSHWIEQYKQQIASTDAHHH 203
D L+KAGVVT+ ++ + G V G A ++ WI QY Q
Sbjct: 126 DLLLKAGVVTE-TIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWI-QYHQ---------- 173
Query: 204 GQQGVQGAYFPNRLVPQPLNVGPGAILEPSYSDGQ---TSSGMIGGMSDSQTPGRKRGMS 260
P+ +PQP P + SD Q + S ++GG+SD+QTPGRKR S
Sbjct: 174 ---------LPS--MPQPQAFMPYPV-----SDMQAMVSQSSLMGGLSDTQTPGRKRVAS 217
Query: 261 GDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQKESDYLE 320
G+V +K +ERRQKRMIKNRESAARSRARKQAYT+ELE KVSRLEEEN RL++QK E
Sbjct: 218 GEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQK-----E 272
Query: 321 LDELICAVPVPEPKYQLRRTSSADF 345
+++++ +VP P+PK QLRRTSSA F
Sbjct: 273 VEKILPSVPPPDPKRQLRRTSSAPF 297
>AT2G41070.1 | chr2:17131249-17132208 FORWARD LENGTH=263
Length = 262
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 177/317 (55%), Gaps = 81/317 (25%)
Query: 33 YSLTLDEVQSQLG---EPLHSMNLDELLRSVFPDGLAIADGAGATTSSQQHQPGSGLLRQ 89
YSL L EVQ+ LG +PL SMNLDELL++V P GL+RQ
Sbjct: 23 YSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPPA------------------EEGLVRQ 64
Query: 90 GSITMPPELSKKTVDEVWKGIQAAPKRNAETXXXXXXXXXXXERQPTLGEVTLEDFLVKA 149
GS+T+P +LSKKTVDEVW+ IQ N + +QPTLGE+TLED L++A
Sbjct: 65 GSLTLPRDLSKKTVDEVWRDIQQDKNGNGTS-------TTTTHKQPTLGEITLEDLLLRA 117
Query: 150 GVVTQGSLKELSDVGNVDPVGRGVTATGTVDLAPGSHWIEQYKQQIASTDAHHHGQQGVQ 209
GVVT+ V V++A W+E +HH Q Q
Sbjct: 118 GVVTETV----------------VPQENVVNIASNGQWVE-----------YHHQPQQQQ 150
Query: 210 GAYFPNRLVPQPLNVGPGAILEPSYSDGQTSSGMIGGMSDS-QTPGRKRGMSGDVADKLM 268
G + P+ + M+GG+SD+ Q PGRKR ++G++ +K +
Sbjct: 151 G------FMTYPVCEMQDMV-------------MMGGLSDTPQAPGRKR-VAGEIVEKTV 190
Query: 269 ERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQKESDYLELDELICAV 328
ERRQKRMIKNRESAARSRARKQAYT+ELE KVSRLEEEN +L+R K E+++++ +
Sbjct: 191 ERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLRRLK-----EVEKILPSE 245
Query: 329 PVPEPKYQLRRTSSADF 345
P P+PK++LRRT+SA
Sbjct: 246 PPPDPKWKLRRTNSASL 262
>AT1G49720.2 | chr1:18400826-18402362 FORWARD LENGTH=404
Length = 403
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 166/340 (48%), Gaps = 70/340 (20%)
Query: 33 YSLTLDEVQSQLGEP---LHSMNLDELLRSVFPDGLAIADGAGATTSSQQHQPG------ 83
YSLT DE+QS LGEP SMN+DELL++++ A A TT+S PG
Sbjct: 30 YSLTFDELQSTLGEPGKDFGSMNMDELLKNIWT---AEDTQAFMTTTSSVAAPGPSGFVP 86
Query: 84 --SGLLRQGSITMPPELSKKTVDEVWKGIQAAPKRNAETXXXXXXXXXXXERQPTLGEVT 141
+GL RQGS+T+P LS+KTVDEVWK + + N T ERQ TLGE+T
Sbjct: 87 GGNGLQRQGSLTLPRTLSQKTVDEVWKYLNSKEGSNGNT------GTDALERQQTLGEMT 140
Query: 142 LEDFLVKAGVVTQGSLKELSD---------------VGNVDPVGRGVTATGT-----VDL 181
LEDFL++AGVV + + ++ + G P ++ G ++
Sbjct: 141 LEDFLLRAGVVKEDNTQQNENSSSGFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQ 200
Query: 182 APGSHWIEQYKQQIASTDAHHHGQQGVQGAYFPNRLVPQ--------PLNVGPGAILEPS 233
APG + + H Q P + P+ P+N+ + E S
Sbjct: 201 APGLGL--KVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNRGLFETS 258
Query: 234 YSDGQTSSGM--IGGMSDSQTPGRK----------------RGMSGDVA-DKLMERRQKR 274
+DG +S M GG + +PG RG + +K++ERRQKR
Sbjct: 259 -ADGPANSNMGGAGGTVTATSPGTSSAENNTWSSPVPYVFGRGRRSNTGLEKVVERRQKR 317
Query: 275 MIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQK 314
MIKNRESAARSRARKQAYT ELE ++ L+ N L++++
Sbjct: 318 MIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQ 357
>AT3G44460.1 | chr3:16080115-16081722 REVERSE LENGTH=332
Length = 331
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 148/291 (50%), Gaps = 56/291 (19%)
Query: 34 SLTLDEVQSQLGEPLHSMNLDELLRSVFPDGLAIADGAGATTSSQQHQPGSGLLRQGSIT 93
SLTLDE+Q + G+ +MN+DE L +++ + D G + +P L RQGS++
Sbjct: 43 SLTLDEIQMKSGKSFGAMNMDEFLANLWTT-VEENDNEGGGAHNDGEKPAV-LPRQGSLS 100
Query: 94 MPPELSKKTVDEVWKGIQAAPKRNAETXXXXXXXXXXXERQPTLGEVTLEDFLVKAGVVT 153
+P L KKTVDEVW IQ +++ + RQ TLGE+TLEDFLVKAGVV
Sbjct: 101 LPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFLVKAGVV- 159
Query: 154 QGSLKEL-----SDVGNVDPVGRGVTATGTVDLAPGSHWIEQYKQQIASTDAHHHGQQGV 208
Q LK SD G G G + + +++G
Sbjct: 160 QEPLKTTMRMSSSDFGYNPEFGVG----------------------LHCQNQNNYGDN-- 195
Query: 209 QGAYFPNRLVPQPLNVGPGAILEPSYSD-GQTSSGMIG-GMSDSQTPG------RKRGMS 260
+ Y NR P YS G++SS M G G S+ G +KR +
Sbjct: 196 RSVYSENR---------------PFYSVLGESSSCMTGNGRSNQYLTGLDAFRIKKRIID 240
Query: 261 GDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLK 311
G + LMERRQ+RMIKNRESAARSRAR+QAYT ELE +++ L EEN +LK
Sbjct: 241 GP-PEILMERRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLK 290
>AT4G35900.1 | chr4:17004746-17005952 FORWARD LENGTH=286
Length = 285
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 10/93 (10%)
Query: 254 GRKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQ 313
G+KRG D + RR KRMIKNRESAARSRARKQAYTNELE +V+ L+ EN RLKRQ
Sbjct: 202 GKKRGQ--DSNEGSGNRRHKRMIKNRESAARSRARKQAYTNELELEVAHLQAENARLKRQ 259
Query: 314 KESDYLELDELICAVPVPEPKYQ-LRRTSSADF 345
+ D+L A + +PK L+R+S+A F
Sbjct: 260 Q-------DQLKMAAAIQQPKKNTLQRSSTAPF 285
>AT3G19290.3 | chr3:6687956-6689784 FORWARD LENGTH=433
Length = 432
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 33 YSLTLDEVQSQLGEP---LHSMNLDELLRSVF----PDGLAIADGAGATTSSQQHQPGS- 84
YSLT DE+Q+ LG P SMN+DELL+S++ +A+ AT +Q
Sbjct: 41 YSLTFDELQNTLGGPGKDFGSMNMDELLKSIWTAEEAQAMAMTSAPAATAVAQPGAGIPP 100
Query: 85 ---GLLRQGSITMPPELSKKTVDEVWKGIQAAPKRNAETXXXXXXXXXXXERQPTLGEVT 141
L RQGS+T+P +S+KTVDEVWK + + RQ TLGE+T
Sbjct: 101 PGGNLQRQGSLTLPRTISQKTVDEVWKCLITKDGNMEGSSGGGGESNVPPGRQQTLGEMT 160
Query: 142 LEDFLVKAGVV 152
LE+FL +AGVV
Sbjct: 161 LEEFLFRAGVV 171
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 265 DKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQKESDYLELDE 323
+K++ERRQ+RMIKNRESAARSRARKQAYT ELE ++ +L++ N L++ K+++ +E+ +
Sbjct: 348 EKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQK-KQAEMVEMQK 405
>AT1G45249.3 | chr1:17165420-17167415 REVERSE LENGTH=428
Length = 427
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 33 YSLTLDEVQSQLGEPLHSMNLDELLRSVFPDGLAIADGAGATTSSQQHQPGSGLLRQGSI 92
YSLT DE QS +G+ SMN+DELL++++ A +G Q G L RQGS+
Sbjct: 28 YSLTFDEFQSSVGKDFGSMNMDELLKNIWSAEETQAMASGVVPVLGGGQEGLQLQRQGSL 87
Query: 93 TMPPELSKKTVDEVWKGIQAAPKRNAE----TXXXXXXXXXXXERQPTLGEVTLEDFLVK 148
T+P LS+KTVD+VWK + + +RQ TLGEVTLE+FLV+
Sbjct: 88 TLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQAQSQSQSQRQQTLGEVTLEEFLVR 147
Query: 149 AGVV 152
AGVV
Sbjct: 148 AGVV 151
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 34/162 (20%)
Query: 208 VQGAYFPNRLVPQPLNVGPGAILEPSYSDGQTSSGMIGGMSDSQTP------GRKRGMSG 261
VQGA + +P L VG + + P S+G G G S S +P G RG
Sbjct: 276 VQGA---SAAIPGALGVGAVSPVTPLSSEG---IGKSNGDSSSLSPSPYMFNGGVRGRKS 329
Query: 262 DVADKLMERRQKRMIKNRESAARSRARKQ-----------AYTNELENKVSRLEEENVRL 310
+K++ERRQ+RMIKNRESAARSRARKQ AYT ELE +V++L+EEN L
Sbjct: 330 GTVEKVVERRQRRMIKNRESAARSRARKQIFTADQTIYWNAYTVELEAEVAKLKEENDEL 389
Query: 311 KRQ-------KESDYLELDELICAVPVPEPKYQLRRTSSADF 345
+R+ +++ E+ L+ PK +LRRT S +
Sbjct: 390 QRKQARIMEMQKNQETEMRNLLQG----GPKKKLRRTESGPW 427
>AT2G36270.1 | chr2:15204980-15206571 REVERSE LENGTH=443
Length = 442
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 8/74 (10%)
Query: 254 GRKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLK-- 311
GRKR + G V +K++ERRQ+RMIKNRESAARSRARKQAYT ELE ++++L+EEN +LK
Sbjct: 342 GRKRVVDGPV-EKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKHA 400
Query: 312 -----RQKESDYLE 320
R+++ Y E
Sbjct: 401 LAELERKRKQQYFE 414
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 84 SGLLRQGSITMPPELSKKTVDEVWKGIQ-----------AAPKRNAETXXXXXXXXXXXE 132
S L RQGS+T+P L +KTVDEVW I ++
Sbjct: 138 SSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAA 197
Query: 133 RQPTLGEVTLEDFLVKAGVV 152
RQPT GE+TLEDFLVKAGVV
Sbjct: 198 RQPTFGEMTLEDFLVKAGVV 217
>AT2G17770.2 | chr2:7723103-7723951 FORWARD LENGTH=196
Length = 195
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 8/92 (8%)
Query: 254 GRKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQ 313
G+KRG D D +RR KRMIKNRESAARSRARKQAYTNELE +++ L+ EN RLK Q
Sbjct: 112 GKKRGQDSD--DTRGDRRYKRMIKNRESAARSRARKQAYTNELELEIAHLQTENARLKIQ 169
Query: 314 KESDYLELDELICAVPVPEPKYQLRRTSSADF 345
+E +L I + K L+R+S+A F
Sbjct: 170 QE----QLK--IAEATQNQVKKTLQRSSTAPF 195
>AT4G34000.1 | chr4:16296008-16297971 FORWARD LENGTH=455
Length = 454
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 254 GRKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQ 313
GR R +G V +K++ERRQKRMIKNRESAARSRARKQAYT ELE ++++L+E N L++
Sbjct: 359 GRVR-KTGAVLEKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQK- 416
Query: 314 KESDYLELDELICAVPVPEP------KYQLRRT 340
K+ + +E + P+ +P + LRRT
Sbjct: 417 KQVEIMEKQKNQLLEPLRQPWGMGCKRQCLRRT 449
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 36/154 (23%)
Query: 33 YSLTLDEVQSQ----LGEPLHSMNLDELLRSVFP------------DGLAIADGAGATT- 75
+SLT DE Q+ +G+ SMN+DELL++++ I++G T
Sbjct: 34 FSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNISNGNSGNTV 93
Query: 76 -----------------SSQQHQPGSGLLRQGSITMPPELSKKTVDEVWKGIQAAPKRNA 118
S G L RQGS+T+P +S+K VD+VWK + + +
Sbjct: 94 INGGGNNIGGLAVGVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWK--ELMKEDDI 151
Query: 119 ETXXXXXXXXXXXERQPTLGEVTLEDFLVKAGVV 152
+RQ TLGE+TLE+FLV+AGVV
Sbjct: 152 GNGVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVV 185
>AT5G42910.1 | chr5:17203908-17205211 FORWARD LENGTH=371
Length = 370
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 19/118 (16%)
Query: 33 YSLTLDEVQSQLGEPLHSMNLDELLRSVFPDGLAIADGAGATTSSQQHQPGSGLLRQGSI 92
YS T+D+ Q+ LG SMN+DEL++ + +S+++ Q GS RQGS
Sbjct: 27 YSWTVDQFQTSLGLDCGSMNMDELVKHI--------------SSAEETQEGSQ--RQGST 70
Query: 93 TMPPELSKKTVDEVWKGIQAAPKRNAETXXXXXXXXXXXERQPTLGEVTLEDFLVKAG 150
T+PP LSK+ V EVWK I N + Q TLGE+TLE+F ++AG
Sbjct: 71 TLPPTLSKQNVGEVWKSITEEKHTN---NNGGVTNITHLQGQQTLGEITLEEFFIRAG 125
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 30/140 (21%)
Query: 213 FPNRLVPQPLNVGPGAILEPS--YSDGQTSSGMIGGMSDSQTPGRKRGMSGDVADKLMER 270
FP Q +N G ++L PS S+G TS+ GG +S+ K + +++
Sbjct: 248 FPTLNGKQKIN-GESSLLSPSPYISNGSTSTR--GGKINSEITAEK---------QFVDK 295
Query: 271 RQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRL--------KRQKESDYLELD 322
+ +R IKNRESAARSRARKQA T E+E ++ L+++ L KRQ E + L
Sbjct: 296 KLRRKIKNRESAARSRARKQAQTMEVEVELENLKKDYEELLKQHVELRKRQMEPGMISLH 355
Query: 323 ELICAVPVPEPKYQLRRTSS 342
E P+ +LRRT S
Sbjct: 356 E--------RPERKLRRTKS 367
>AT1G03970.1 | chr1:1018237-1019049 FORWARD LENGTH=271
Length = 270
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 234 YSDGQTSSGMIGGMSDSQTPGRKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQAYT 293
+S Q G +GG T G++ + + DK +RQKRMIKNRESAARSR RKQAY
Sbjct: 156 HSSFQMVEGSMGG---GVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQ 212
Query: 294 NELENKVSRLEEENVRLKRQKESD----YLELDELICAVPVPE----PKYQLRRTSSADF 345
ELE ++LEEEN +L ++ E Y +L E++ +PV E P L R+ S ++
Sbjct: 213 VELETLAAKLEEENEQLLKEIEESTKERYKKLMEVL--IPVDEKPRPPSRPLSRSHSLEW 270
>AT5G44080.1 | chr5:17738787-17739734 REVERSE LENGTH=316
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 265 DKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQKESD----YLE 320
DK +RQ+RMIKNRESAARSR RKQAY ELE ++LEEEN L ++ E Y +
Sbjct: 228 DKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEENELLSKEIEDKRKERYQK 287
Query: 321 LDELICAVPVPEPKYQ----LRRTSSADF 345
L E + V V +PK Q LRR S ++
Sbjct: 288 LMEFVIPV-VEKPKQQPPRFLRRIRSLEW 315
>AT4G37730.1 | chr4:17723800-17724717 FORWARD LENGTH=306
Length = 305
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 231 EPSYSDGQTSSGMIGGMSDSQTPGRKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQ 290
EP D + + + S RK+ + ++ D ER++KRM NRESA RSR RKQ
Sbjct: 161 EPDSDDTKQLTAITNFGSGENNHNRKKMIQPEMTD---ERKRKRMESNRESAKRSRMRKQ 217
Query: 291 AYTNELENKVSRLEEENVRL 310
++ + L +V+RL+ EN L
Sbjct: 218 SHIDNLREQVNRLDLENREL 237
>AT1G13600.1 | chr1:4650787-4651377 REVERSE LENGTH=197
Length = 196
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 269 ERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENV----RLKRQKESDYLELDE 323
ER+Q+RMI NRESA RSR RKQ + +EL ++V RL +N +L R ES L L E
Sbjct: 85 ERKQRRMISNRESARRSRMRKQRHLDELWSQVIRLRTDNHCLMDKLNRVSESHELALKE 143
>AT2G46270.1 | chr2:19000859-19002901 FORWARD LENGTH=383
Length = 382
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
Query: 270 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQ-----KESDYLE---- 320
+R++R NRESA RSR RKQA T EL KV L EN+ L+ + ++SD L
Sbjct: 261 KRERRKQSNRESARRSRLRKQAETEELARKVEALTAENMALRSELNQLNEKSDKLRGANA 320
Query: 321 --LDELICAVP 329
LD+L C+ P
Sbjct: 321 TLLDKLKCSEP 331
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.310 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,590,044
Number of extensions: 268338
Number of successful extensions: 1058
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 1031
Number of HSP's successfully gapped: 32
Length of query: 345
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 246
Effective length of database: 8,392,385
Effective search space: 2064526710
Effective search space used: 2064526710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 112 (47.8 bits)