BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0811100 Os01g0811100|AK103541
(249 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27020.1 | chr2:11528515-11530858 REVERSE LENGTH=250 453 e-128
AT3G14290.1 | chr3:4764364-4766381 FORWARD LENGTH=238 134 3e-32
AT1G53850.1 | chr1:20104131-20105792 REVERSE LENGTH=238 134 4e-32
AT1G16470.1 | chr1:5623122-5625439 FORWARD LENGTH=236 130 6e-31
AT1G79210.1 | chr1:29796286-29798240 REVERSE LENGTH=236 129 1e-30
AT3G22110.1 | chr3:7792819-7793571 REVERSE LENGTH=251 127 4e-30
AT1G47250.1 | chr1:17319220-17320900 FORWARD LENGTH=278 126 1e-29
AT5G42790.1 | chr5:17159270-17160975 REVERSE LENGTH=279 126 1e-29
AT5G35590.1 | chr5:13765417-13767768 REVERSE LENGTH=247 113 8e-26
AT5G66140.1 | chr5:26437445-26438677 REVERSE LENGTH=251 112 1e-25
AT3G51260.1 | chr3:19031086-19032746 FORWARD LENGTH=251 112 2e-25
AT2G05840.1 | chr2:2234226-2236053 FORWARD LENGTH=247 110 6e-25
AT4G15165.1 | chr4:8649460-8650212 FORWARD LENGTH=209 89 2e-18
AT5G40580.1 | chr5:16248511-16250451 REVERSE LENGTH=275 50 1e-06
AT3G27430.2 | chr3:10152910-10155052 FORWARD LENGTH=274 50 2e-06
>AT2G27020.1 | chr2:11528515-11530858 REVERSE LENGTH=250
Length = 249
Score = 453 bits (1166), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/249 (84%), Positives = 235/249 (94%)
Query: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
MSSIGTGYDLSVTTFSPDGRVFQ+EYA KAVDNSGTVVGIKCKDGIV+GVEKL+ SKMML
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMML 60
Query: 61 EGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYV 120
GSNRRIHSVH H+G+AVAGLAADGRQIV+RAKSEA SYE VYG+ + VKEL++RVASYV
Sbjct: 61 PGSNRRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYV 120
Query: 121 HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLK 180
HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSG+SY+YFGAA+GKG+QAAKTEIEKL
Sbjct: 121 HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLN 180
Query: 181 LSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNRQHQKVPADLLEQAKVAAQ 240
LSE+TC+EG++EVAKIIY +HDEAKDKAFELE+SWIC+ES R+HQKVP DLLE+AK AA+
Sbjct: 181 LSEMTCKEGVIEVAKIIYKLHDEAKDKAFELEMSWICEESKREHQKVPDDLLEEAKTAAK 240
Query: 241 AALEEMDAD 249
ALEEMDAD
Sbjct: 241 TALEEMDAD 249
>AT3G14290.1 | chr3:4764364-4766381 FORWARD LENGTH=238
Length = 237
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 15/207 (7%)
Query: 6 TGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNR 65
T YD V TFSP+GR+FQVEYA +A+ T +G+K K+G+VL VEK +TS ++ S
Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVE 65
Query: 66 RIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTL 125
+I + H G A++GL AD R +V A+ E ++ YGEP++V+ ++ LC L
Sbjct: 66 KIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVE------STTQALCDL 119
Query: 126 YWWL---------RPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEI 176
RPFG +++ G+D +GP LY +PSG ++ A+G G + A + +
Sbjct: 120 ALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSL 179
Query: 177 EKLKLSELTCREGIVEVAKIIYGVHDE 203
++ ++T +E I+ V +E
Sbjct: 180 QEQFNKDITLQEAETIAVSILKQVMEE 206
>AT1G53850.1 | chr1:20104131-20105792 REVERSE LENGTH=238
Length = 237
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 15/207 (7%)
Query: 6 TGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNR 65
T YD V TFSP+GR+FQVEYA +A+ T +G+K K+G+VL VEK +TS ++ S
Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVE 65
Query: 66 RIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTL 125
+I + H G A++GL AD R +V A+ E ++ YGEP++V+ ++ LC L
Sbjct: 66 KIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVE------STTQALCDL 119
Query: 126 YWWL---------RPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEI 176
RPFG +++ G+D +GP LY +PSG ++ A+G G + A + +
Sbjct: 120 ALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSL 179
Query: 177 EKLKLSELTCREGIVEVAKIIYGVHDE 203
++ +L+ +E I+ V +E
Sbjct: 180 QEQFNKDLSLQEAETIAVSILKQVMEE 206
>AT1G16470.1 | chr1:5623122-5625439 FORWARD LENGTH=236
Length = 235
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 108/183 (59%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
Y S+TTFSP G++ Q+E+A AV + T +GIK +G+V+ EK + S ++ E S ++I
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKI 65
Query: 68 HSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW 127
+ + G+ +G+ D R +V +++ +A Y ++Y EPI V +L A+ + T
Sbjct: 66 QHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSG 125
Query: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCR 187
+RPFG +++ GYD GPQLY ++PSG + + +A+GK AKT +EK ++
Sbjct: 126 GVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELD 185
Query: 188 EGI 190
+ I
Sbjct: 186 DAI 188
>AT1G79210.1 | chr1:29796286-29798240 REVERSE LENGTH=236
Length = 235
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 107/183 (58%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
Y S+TTFSP G++ Q+E+A AV + T +GIK +G+V+ EK + S ++ E S ++I
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKI 65
Query: 68 HSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW 127
+ + G +G+ D R +V +++ +A Y ++Y EPI V +L A+ + T
Sbjct: 66 QHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSG 125
Query: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCR 187
+RPFG +++ GYD GPQLY ++PSG + + +A+GK AKT +EK ++
Sbjct: 126 GVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELD 185
Query: 188 EGI 190
+ I
Sbjct: 186 DAI 188
>AT3G22110.1 | chr3:7792819-7793571 REVERSE LENGTH=251
Length = 250
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMM-LEGSNRR 66
YD T FSP+GR++QVEYA +A+ N+G+ +GI KDG+VL EK VTSK++ S +
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEK 64
Query: 67 IHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLY 126
++ + H AVAG+ +D +++ A+ +A Y +Y EP+ V++L + T +
Sbjct: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQF 124
Query: 127 WWLRPFGCGVILGGYDR-DGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELT 185
LRPFG + G+D+ G QLYM +PSG + AA+G QAA++ I K +
Sbjct: 125 GGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQS-ILKQDYKDDA 183
Query: 186 CREGIVEVA-KIIYGVHDEAKDKAFELELSWI 216
RE VE+A K++ D + +LEL+ +
Sbjct: 184 TREEAVELALKVLTKTMDSTSLTSEKLELAEV 215
>AT1G47250.1 | chr1:17319220-17320900 FORWARD LENGTH=278
Length = 277
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
YD VTT+SP GR+FQVEYA +AV +G++ + +VL S+ L R+I
Sbjct: 6 YDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSE--LSSHQRKI 63
Query: 68 HSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW 127
V H G+A+AGL ADGR + +SE+ ++ Y P+ V L +A +CT
Sbjct: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRS 123
Query: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
W RP+G G+++GG D G LY PSG ++Y A+G QAAKT +E+
Sbjct: 124 WKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER 174
>AT5G42790.1 | chr5:17159270-17160975 REVERSE LENGTH=279
Length = 278
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
YD VTT+SP GR+FQVEYA +AV +G++ + +VL S+ L R+I
Sbjct: 6 YDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSE--LSSHQRKI 63
Query: 68 HSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW 127
V H G+A+AGL ADGR + +SE+ ++ Y P+ V L +A +CT
Sbjct: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRS 123
Query: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
W RP+G G+++GG D G LY PSG ++Y A+G QAAKT +E+
Sbjct: 124 WKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER 174
>AT5G35590.1 | chr5:13765417-13767768 REVERSE LENGTH=247
Length = 246
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 100/176 (56%), Gaps = 2/176 (1%)
Query: 5 GTGYDLSVTTFSPDGRVFQVEYATKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMMLEGS 63
G GYD +T FSP+GR+FQVEYA KAV +G T +G++ KD + + +K V K++ + S
Sbjct: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSS 65
Query: 64 NRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLC 123
+ + + GL G+ AD R +V +A+++AA + YG + V LA +A +
Sbjct: 66 VTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVY 125
Query: 124 TLYWWLRPFG-CGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
T + ++RP G +++G + +GP LY +P+G Y + + G Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEK 181
>AT5G66140.1 | chr5:26437445-26438677 REVERSE LENGTH=251
Length = 250
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
YD ++T FSPDG +FQVEYA +AV VG++ D +VL VEK T K+ S R+I
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKI 63
Query: 68 HSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW 127
S+ H LA AGL AD R ++++A+ E S+ +P++V+ + +A T
Sbjct: 64 VSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSG 123
Query: 128 WLRPFGCGVILGGYDRDG--PQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
+RPFG ++ G+D P LY +PSG + A G+ + + +EK
Sbjct: 124 GVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEK 176
>AT3G51260.1 | chr3:19031086-19032746 FORWARD LENGTH=251
Length = 250
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
YD ++T FSPDG +FQVEYA +AV VG++ D +VL VEK T K+ S R+I
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKI 63
Query: 68 HSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW 127
S+ H LA AGL AD R ++++A+ E S+ +P++V+ + +A T
Sbjct: 64 VSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSG 123
Query: 128 WLRPFGCGVILGGYD--RDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
+RPFG ++ G+D P LY +PSG + A G+ + + +EK
Sbjct: 124 GVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEK 176
>AT2G05840.1 | chr2:2234226-2236053 FORWARD LENGTH=247
Length = 246
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Query: 5 GTGYDLSVTTFSPDGRVFQVEYATKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMMLEGS 63
G GYD +T FSP+GR+FQVEYA KAV +G T +G++ KD + + +K V K++ + S
Sbjct: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSS 65
Query: 64 NRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLC 123
+ V + GL G+ AD R +V +A++EAA + YG + LA +A +
Sbjct: 66 VSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVY 125
Query: 124 TLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
T + ++RP G ++ G D + GP LY +P+G Y + + G Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEK 181
>AT4G15165.1 | chr4:8649460-8650212 FORWARD LENGTH=209
Length = 208
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 44/209 (21%)
Query: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RR 66
YD T FSP+GR++QVEYA +A+ N+G+ +GI KDG+VL EK VTSK++ S+ +
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSSSMEK 64
Query: 67 IHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLY 126
++ + H AVAG+ +D +++ A+ +A +++ +G
Sbjct: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRWDRNHG---------------------- 102
Query: 127 WWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTC 186
F QLYM +PSG + AA+G QAA++ I K +
Sbjct: 103 -----F--------------QLYMSDPSGNYGGWQAAAVGANNQAAQS-ILKQDYKDDAT 142
Query: 187 REGIVEVA-KIIYGVHDEAKDKAFELELS 214
RE +V++A K++ D A +LEL+
Sbjct: 143 REEVVQLAIKVLSKTMDSTSLTAEKLELA 171
>AT5G40580.1 | chr5:16248511-16250451 REVERSE LENGTH=275
Length = 274
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 36 TVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHWHSGLAVAGLAADGRQIVSRAKS 94
T+VG+ KDG++LG + T ++ N +IH + + AG AAD + S
Sbjct: 41 TIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS 100
Query: 95 EAASYEKVYGEPISVKELADRVASYVHLCT--LYWWLRPFGCGVILGGYDRDGPQLYMIE 152
+ + G RV + + L L+ + ++LGG D GP L+ I
Sbjct: 101 QLRLHRYQTGR-------DSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
Query: 153 PSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKII 197
P G + A +G G AA + E LT EGI VA+ I
Sbjct: 154 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAI 198
>AT3G27430.2 | chr3:10152910-10155052 FORWARD LENGTH=274
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 36 TVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHWHSGLAVAGLAADGRQIVSRAKS 94
T+VG+ KDG++LG + T ++ N +IH + + AG AAD + S
Sbjct: 41 TIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS 100
Query: 95 EAASYEKVYGEPISVKELADRVASYVHLCT--LYWWLRPFGCGVILGGYDRDGPQLYMIE 152
+ + G RV + + L L+ + ++LGG D GP L+ I
Sbjct: 101 QLRLHRYQTGR-------DSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
Query: 153 PSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKII 197
P G + A +G G AA + E LT EGI VA+ I
Sbjct: 154 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESI 198
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,274,806
Number of extensions: 220534
Number of successful extensions: 575
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 561
Number of HSP's successfully gapped: 15
Length of query: 249
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 153
Effective length of database: 8,474,633
Effective search space: 1296618849
Effective search space used: 1296618849
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)