BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0810100 Os01g0810100|AK071916
         (533 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37510.1  | chr4:17626259-17628854 REVERSE LENGTH=538          773   0.0  
AT2G48121.2  | chr2:19682096-19682329 FORWARD LENGTH=78           143   2e-34

>AT4G37510.1 | chr4:17626259-17628854 REVERSE LENGTH=538
          Length = 537

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/476 (77%), Positives = 407/476 (85%), Gaps = 6/476 (1%)

Query: 58  RLLRELAERKKAVSPKKKHPPRRFILKPPLDDERLTQRFXXXXXXXXXXXXXXXXXXXXX 117
           RLL+ELA+RK A  PKKK PP+RFIL+PPLDD++L +RF                     
Sbjct: 68  RLLKELAQRKTATGPKKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSS 127

Query: 118 XXXXXDRTWMDEYLLEAKQALGYPLAPSETLGDGDDDGCPARHFDVLLYLAFQHLDTSCE 177
                D+TW+DEYLLE KQALGY L PSE+LGD +    PA+HFD LLYLAFQH   SC+
Sbjct: 128 KLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDN----PAKHFDTLLYLAFQH--PSCD 181

Query: 178 RTRTRHVRSGHSRLWFLGQYVLELAFCEFFLQRYPRESPGPMRERVFALIGKRAIPKWIK 237
           R R RHV++GHSRLWFLGQYVLELA  EFFLQRYPRESPGPMRERVFALIGKR +PKWIK
Sbjct: 182 RARARHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIK 241

Query: 238 AASLHNLVFPYDDLDKMIRKDREPPAKAVFWALFGAIYLCFGMPEVYRVLFEAFGMDPED 297
           AASL NL+FPYDD+DK+IRK+REPP K+VFWALFGAIYLCFGMPEVYRVLFE FGMDP+ 
Sbjct: 242 AASLQNLIFPYDDMDKLIRKEREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA 301

Query: 298 ESCQPKLRRQLEDVDYVSVEFEKRQLTWQDVAAYRPPPDALFAHPRLFRACVPPGMHRFR 357
           + CQP+ RRQLEDVDYVSVEFE ++L WQD+A Y+PP DALFAHPRLFRACVPPGMHRFR
Sbjct: 302 DECQPRSRRQLEDVDYVSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFR 361

Query: 358 GNIWDFDNRPKVMNTLGYPLPMNDRIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCL 417
           GNIWDFD++PKVM TLGYPL MNDRI EITEARNIELGLGLQLCFLHPSKHKFEHPRFC 
Sbjct: 362 GNIWDFDSKPKVMQTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCF 421

Query: 418 ERLEYVGQKIQDLVMAERLLMKHLDAPGRWLAEKHRRLLMNKYCGRYLRDKHLHHYIIYG 477
           ERLEYVGQKIQD+ MAERLLMKHLDAPG+WL EKHRRLLMNK+CGRYLR+K LH++IIY 
Sbjct: 422 ERLEYVGQKIQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYS 481

Query: 478 ESVQDRFEHNRRLRNPSTTAVQQAIHGLAYCVYGKPDVRRLMFEVFDFEQVQPKAV 533
           E V DR+EHNRRLRNP+TTAVQQAIHGLAY +YGKPDVRRLMFEVFDFEQ+QPKAV
Sbjct: 482 EEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537



>AT2G48121.2 | chr2:19682096-19682329 FORWARD LENGTH=78
          Length = 77

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 64/77 (83%), Positives = 72/77 (93%)

Query: 457 MNKYCGRYLRDKHLHHYIIYGESVQDRFEHNRRLRNPSTTAVQQAIHGLAYCVYGKPDVR 516
           MNK+CGRYLR+K LH++IIY E V DR+EHNRRLRNP+TTAVQQAIHGLAY +YGKPDVR
Sbjct: 1   MNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVR 60

Query: 517 RLMFEVFDFEQVQPKAV 533
           RLMFEVFDFEQ+QPKAV
Sbjct: 61  RLMFEVFDFEQIQPKAV 77



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.142    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,239,168
Number of extensions: 475109
Number of successful extensions: 1142
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1135
Number of HSP's successfully gapped: 2
Length of query: 533
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 430
Effective length of database: 8,282,721
Effective search space: 3561570030
Effective search space used: 3561570030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)