BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0806400 Os01g0806400|Os01g0806400
(272 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06990.1 | chr5:2169699-2170484 FORWARD LENGTH=262 245 2e-65
AT2G21990.1 | chr2:9359573-9360331 REVERSE LENGTH=253 203 9e-53
AT4G39610.1 | chr4:18393808-18394602 REVERSE LENGTH=265 199 9e-52
AT2G41660.1 | chr2:17367945-17368838 FORWARD LENGTH=298 171 5e-43
AT5G42680.1 | chr5:17114640-17115356 FORWARD LENGTH=239 169 2e-42
AT5G23100.1 | chr5:7753557-7754390 FORWARD LENGTH=278 147 5e-36
AT2G37880.1 | chr2:15860705-15861448 FORWARD LENGTH=248 146 1e-35
AT3G25640.1 | chr3:9333775-9334578 FORWARD LENGTH=268 145 2e-35
AT1G21050.1 | chr1:7366859-7367596 FORWARD LENGTH=246 143 1e-34
AT5G65340.1 | chr5:26113684-26114445 REVERSE LENGTH=254 125 2e-29
AT1G76610.1 | chr1:28751049-28751729 FORWARD LENGTH=227 115 3e-26
AT2G22460.1 | chr2:9533354-9534091 REVERSE LENGTH=246 107 6e-24
>AT5G06990.1 | chr5:2169699-2170484 FORWARD LENGTH=262
Length = 261
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/249 (51%), Positives = 161/249 (64%), Gaps = 18/249 (7%)
Query: 28 SPHTPRPAITLTAPPSKKKXXXXXXXXXXXXXXXXXXXFRSLPILAPACRFHGAIRAPGG 87
S T RP ITL P + K FRSLPI++P C+F GG
Sbjct: 27 STATVRPEITLEQPSGRNKTTGSKSTKLFRRVRSV---FRSLPIMSPMCKF-----PVGG 78
Query: 88 ASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEH 147
R H+ HV G +R TGTLFGYRK RV LAVQE P S+PILLLELA+ TG+ +Q++G
Sbjct: 79 GGRLHENHVHGGTRVTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGKLLQDLGVGL 138
Query: 148 LRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTV 207
+R+ALECEKKP +T+++DEP+W Y NG+K GY ++R+PTE DL VMQ+L V
Sbjct: 139 VRIALECEKKPS------EKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLHAV 192
Query: 208 SVGAGVLPTD----VMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGP 263
S+GAGVLP G Q GDL YMRA F+RV+GSRDSE++YM+NPDGN+GP
Sbjct: 193 SMGAGVLPVSSGAITEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNSGP 252
Query: 264 ELSIFFIRI 272
ELSIFF+R+
Sbjct: 253 ELSIFFVRV 261
>AT2G21990.1 | chr2:9359573-9360331 REVERSE LENGTH=253
Length = 252
Score = 203 bits (516), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 148/210 (70%), Gaps = 19/210 (9%)
Query: 66 FRSLPILAPA-CRFHGAIRAPGGASRAHDGHVSGAS--RTTGTLFGYRKARVTLAVQETP 122
FRS PI+ PA C+ PGG+ D H SG+S R TGTLFGYRK RV+L++QE+P
Sbjct: 59 FRSFPIITPAACKIP---VLPGGS--LPDQHRSGSSGSRVTGTLFGYRKGRVSLSIQESP 113
Query: 123 GSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNG 182
+P L++ELAMQT +E+ +R+ALE EK+ + +++DEPLWT + NG
Sbjct: 114 RCLPSLVVELAMQTMVLQKELSGGMVRIALETEKR-----GDKEKIKIMDEPLWTMFSNG 168
Query: 183 RKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDR 242
+K GY ++R+ TE DL VM+LLR VS+GAGVLP G+ E D+ ++AYMRA F+R
Sbjct: 169 KKTGYGVKRDATEEDLNVMELLRPVSMGAGVLP-----GNTEFEGPDS-EMAYMRAYFER 222
Query: 243 VVGSRDSESFYMLNPDGNNGPELSIFFIRI 272
VVGS+DSE+FYML+P+GNNGPELSIFF+R+
Sbjct: 223 VVGSKDSETFYMLSPEGNNGPELSIFFVRV 252
>AT4G39610.1 | chr4:18393808-18394602 REVERSE LENGTH=265
Length = 264
Score = 199 bits (507), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 142/216 (65%), Gaps = 23/216 (10%)
Query: 66 FRSLPIL---APACRF---HGAIRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQ 119
FRS PI + AC+ H + P D H SR TGTLFGYRK RV+L++Q
Sbjct: 63 FRSFPIFTTPSVACKIPVIHPGLGLP-------DPH-HNTSRITGTLFGYRKGRVSLSIQ 114
Query: 120 ETPGSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKPPGAGAGIG---RTRLLDEPLW 176
E P +P L++ELAMQT +E+ +R+ALE EK+P +T +L+EPLW
Sbjct: 115 ENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRADNNNSKTEKKTDILEEPLW 174
Query: 177 TAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYM 236
T Y G K GY ++RE TE DL VM+LLR VS+GAGVLP G++ +E D G++AYM
Sbjct: 175 TMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLP-----GNSESEGPD-GEMAYM 228
Query: 237 RARFDRVVGSRDSESFYMLNPDGNNGPELSIFFIRI 272
RA F+RV+GS+DSE+FYML+P+GNNGPELS FF+R+
Sbjct: 229 RAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVRV 264
>AT2G41660.1 | chr2:17367945-17368838 FORWARD LENGTH=298
Length = 297
Score = 171 bits (432), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 120/186 (64%), Gaps = 16/186 (8%)
Query: 94 GHVSGASRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEHLRVALE 153
G S R TGTL+G+++ VT +VQ S P+LLL+LAM T ++EM + +R+ALE
Sbjct: 121 GSSSLGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALE 180
Query: 154 CEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRR--EPTEGDLTVMQLLRTVSVGA 211
CEK+ T+L EP WT Y NGRK GYA+ R T+ D V+ + V+VGA
Sbjct: 181 CEKRHRSG------TKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGA 234
Query: 212 GVLPT-----DVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELS 266
GV+PT DV G +G E+ G+L YMR +F+RVVGSRDSE+FYM+NPD N GPELS
Sbjct: 235 GVIPTPKTIDDVSGVGSGTEL---GELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELS 291
Query: 267 IFFIRI 272
IF +RI
Sbjct: 292 IFLLRI 297
>AT5G42680.1 | chr5:17114640-17115356 FORWARD LENGTH=239
Length = 238
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 131/208 (62%), Gaps = 20/208 (9%)
Query: 66 FRSLPILAPACRFHGAIRAPGGASRAHDGHVSGASRTTGTLFGYRKARVTLAVQETPGSV 125
F+ +P+L+ C+ + SR H + TTGT+FG+RK RV LA+QE P +
Sbjct: 47 FKLIPMLSSGCKMVNLL------SRGHRRPLLKDYATTGTIFGFRKGRVFLAIQEDPHCL 100
Query: 126 PILLLELAMQTGRFMQEMGAEHLRVALECEKKPPGAGAGIGRTRLLDEPLWTAYVNGRKI 185
PI ++EL M T +EM +E +R+ALE E K R ++L+E +W Y NGRKI
Sbjct: 101 PIFIIELPMLTSALQKEMASETVRIALESETKT-------SRKKVLEEYVWGIYCNGRKI 153
Query: 186 GYAMRREP-TEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVV 244
GY++RR+ +E ++ V+ LR VS+GAGVLP + + G++ YMRARFDRV+
Sbjct: 154 GYSIRRKNMSEEEMYVIDALRGVSMGAGVLPC-----KNQYDQETEGEMTYMRARFDRVI 208
Query: 245 GSRDSESFYMLNPDGN-NGPELSIFFIR 271
GS+DSE+ YM+NP+G+ G ELSI+F+R
Sbjct: 209 GSKDSEALYMINPEGSGQGTELSIYFLR 236
>AT5G23100.1 | chr5:7753557-7754390 FORWARD LENGTH=278
Length = 277
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 119/207 (57%), Gaps = 27/207 (13%)
Query: 89 SRAHDGHVSGA--SRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAE 146
SRA G+ + SR GTLFG R+ V ++Q+ P S P L+ELA ++EM +
Sbjct: 75 SRARPGNQNSGLGSRVVGTLFGSRRGHVHFSIQKDPNSPPAFLIELATPISGLVKEMASG 134
Query: 147 HLRVALECEKKPPGA-----------GAG----------IGRTRLLDEPLWTAYVNGRKI 185
+R+ALEC+K G G + R RL++EP+W Y NG+K
Sbjct: 135 LVRIALECDKGKEEEEGEEKNGTLRHGGGDKTKTTTTAAVSR-RLVEEPMWRTYCNGKKC 193
Query: 186 GYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGGDAGAEVQDAGDLAYMRARFDRVVG 245
G+A RRE E + V++ L VS+GAGVLP + G GD+ YMRA+F+R+VG
Sbjct: 194 GFATRRECGEKEKKVLKALEMVSMGAGVLPET---EEIGGGGGGGGDIMYMRAKFERIVG 250
Query: 246 SRDSESFYMLNPDGNNGPELSIFFIRI 272
SRDSE+FYM+NPD N PELSI+ +RI
Sbjct: 251 SRDSEAFYMMNPDSNGAPELSIYLLRI 277
>AT2G37880.1 | chr2:15860705-15861448 FORWARD LENGTH=248
Length = 247
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 108/169 (63%), Gaps = 8/169 (4%)
Query: 104 GTLFGYRKARVTLAVQETPGSV-PILLLELAMQTGRFMQEMGAEHLRVALECEKKPPGAG 162
GT+FG RK V VQ SV PILLLEL++ T + + EMG+ +RVALEC +P
Sbjct: 83 GTIFGRRKGHVWFCVQHDRLSVKPILLLELSIATSQLVHEMGSGLVRVALECPTRPE--- 139
Query: 163 AGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGGD 222
+ L P+WT + NGRK+G+A+RR E +++ L +++VGAGVLP+ G
Sbjct: 140 --LKSCLLRSVPVWTMFCNGRKLGFAVRRSANEETRMMLKRLESMTVGAGVLPSG--SGL 195
Query: 223 AGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELSIFFIR 271
G++ D ++ YMRA ++ VVGS DSESF+++NPD N+ ELSIF +R
Sbjct: 196 GGSDESDTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLR 244
>AT3G25640.1 | chr3:9333775-9334578 FORWARD LENGTH=268
Length = 267
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 9/176 (5%)
Query: 101 RTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKPPG 160
R GTLFG R+ V AVQ+ P +P +L++L T ++EM + +R+ALE
Sbjct: 97 RVVGTLFGNRRGHVYFAVQDDPTRLPAVLIQLPTPTSVLVREMASGLVRIALET-----A 151
Query: 161 AGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMG 220
A + +LL+E W Y NG+K GYA R+E E + V++ + +++GAGVLP
Sbjct: 152 AYKTDSKKKLLEESTWRTYCNGKKCGYAARKECGEAEWKVLKAVGPITMGAGVLPATTTT 211
Query: 221 GDA---GAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPD-GNNGPELSIFFIRI 272
D GA + G+L YMRARF+RVVGSRDSE+FYM+NPD + GPELS++F+R+
Sbjct: 212 VDEEGNGAVGSEKGELMYMRARFERVVGSRDSEAFYMMNPDVSSGGPELSVYFLRV 267
>AT1G21050.1 | chr1:7366859-7367596 FORWARD LENGTH=246
Length = 245
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 112/170 (65%), Gaps = 16/170 (9%)
Query: 104 GTLFGYRKARVTLAVQETP-GSVPILLLELAMQTGRFMQEMGAE-HLRVALECEKKPPGA 161
GT FG+R+ RV+ +Q+ GS P+LLLELA+ T +EM E LR+ALEC+++
Sbjct: 89 GTFFGHRRGRVSFCLQDAAVGSSPLLLLELAVPTAALAKEMDEEGVLRIALECDRRRSSN 148
Query: 162 GAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGG 221
+ + D P+W+ + NGRK+G+A+RR+ TE D ++++++VSVGAGV+P+
Sbjct: 149 SRS---SSIFDVPVWSMFCNGRKMGFAVRRKVTENDAVFLRMMQSVSVGAGVVPS----- 200
Query: 222 DAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELSIFFIR 271
++ + Y+RARF+RV GS DSESF+M+NP G+ G ELSIF +R
Sbjct: 201 ------EEEDQMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLR 244
>AT5G65340.1 | chr5:26113684-26114445 REVERSE LENGTH=254
Length = 253
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 9/172 (5%)
Query: 103 TGTLFGYRKARVTLAVQETPGSV---PILLLELAMQTGRFMQEMGAEHLRVALECEKKPP 159
TGT+FG+R+ +V +Q T I+LLEL + T +EM LR+ALE
Sbjct: 84 TGTIFGFRRGKVNFCIQATNSKTLNPIIVLLELTVPTEVLAREMQGGVLRIALESNNNDG 143
Query: 160 GAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVM 219
+ LL PLW Y NGRK+G+A++REP++ +L +++L V+ GAGV V
Sbjct: 144 YDSHEDSSSSLLTTPLWNMYCNGRKVGFAIKREPSKSELAALKVLTPVAEGAGV----VN 199
Query: 220 GGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELSIFFIR 271
G + E D + Y+RA F RV GS DSESF++++P G G ELSIFF R
Sbjct: 200 GEEINREKSD--HMMYLRASFKRVFGSFDSESFHLVDPRGIIGQELSIFFSR 249
>AT1G76610.1 | chr1:28751049-28751729 FORWARD LENGTH=227
Length = 226
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 102/171 (59%), Gaps = 24/171 (14%)
Query: 103 TGTLFGYRKARVTLAVQETP--GSVPILLLELAMQTGRFMQEMGAEHLRVALECEKKPPG 160
TGT +G+R+ V+ +Q+ S P+LLLELA+ T +EM LR+AL +
Sbjct: 77 TGTFYGHRRGHVSFCLQDDTRPSSPPLLLLELAVPTAALAREMEEGFLRIALRSKSNR-- 134
Query: 161 AGAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMG 220
R+ + + P+W+ Y NGRK G+A+RRE TE D+ ++L+++VSVGAGV+P
Sbjct: 135 ------RSSIFNVPVWSMYCNGRKFGFAVRRETTENDVGFLRLMQSVSVGAGVIPN---- 184
Query: 221 GDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELSIFFIR 271
G+ Y+RA+F+RV GS DSESF+M+N G G ELSIF R
Sbjct: 185 ----------GETLYLRAKFERVTGSSDSESFHMVNQGGGYGQELSIFLSR 225
>AT2G22460.1 | chr2:9533354-9534091 REVERSE LENGTH=246
Length = 245
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 14/169 (8%)
Query: 103 TGTLFGYRKARVTLAVQETPGSVPI-LLLELAMQTGRFMQEMGAEHLRVALECEKKPPGA 161
TGT+FGYRK ++ +Q S + LLLELA+ T +EM LR+ LE +
Sbjct: 86 TGTIFGYRKGKINFCIQTPRKSTNLDLLLELAVPTTVLAREMREGALRIVLERNNEKQDD 145
Query: 162 GAGIGRTRLLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLPTDVMGG 221
+ L +P W Y NG+++GYA +R P++ D+T + L V VGAGV+ +G
Sbjct: 146 DS------FLSKPFWNMYCNGKRVGYARKRSPSQDDMTALTALSKVVVGAGVVTGKELG- 198
Query: 222 DAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPDGNNGPELSIFFI 270
+ +L Y+RA F RV GS++SESF++++P GN G ELSIF +
Sbjct: 199 ------RFDDELMYLRASFRRVNGSKESESFHLIDPAGNIGQELSIFIV 241
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,410,740
Number of extensions: 218403
Number of successful extensions: 1165
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1132
Number of HSP's successfully gapped: 12
Length of query: 272
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 175
Effective length of database: 8,447,217
Effective search space: 1478262975
Effective search space used: 1478262975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)