BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0802400 Os01g0802400|Os01g0802400
         (685 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1  | chr3:14321838-14323928 FORWARD LENGTH=697          250   2e-66
AT1G18560.1  | chr1:6385614-6388005 FORWARD LENGTH=691            140   3e-33

>AT3G42170.1 | chr3:14321838-14323928 FORWARD LENGTH=697
          Length = 696

 Score =  250 bits (638), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 288/610 (47%), Gaps = 54/610 (8%)

Query: 47  KAQCKYCGLMLS---ATRKSGTSHLINHICE-SCPLV----DGE---------------V 83
           +A CK C    +     + +GTSHL  HI + +CP +    D +                
Sbjct: 85  RAFCKGCNQSFAYSNGNKVAGTSHLKRHIFKGTCPALIHTHDNDNNPLMSTPYTPKTDTP 144

Query: 84  RNRFISTVRKQPVENFVFDPKKTEELMIKYFIHAEIPFHKIEDPYLDDWMASMQPTFKLV 143
           R R+ S     P     F+  K  + + K  I  + P H ++ P    ++ S+QP F  V
Sbjct: 145 RRRYRSQNNASPY--VAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAV 202

Query: 144 GRQSIRDKIYNYYNRLKQELHAELENLDSRVCLTSDMWTSNQNLGYMVVTAHYVDAEFKM 203
              +++      Y   KQ +   LE +  R CLT D WTS   LGY+ +TAHY+D+++K+
Sbjct: 203 SFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKI 262

Query: 204 KKKIISLKPVKYPHTSFAIEEAMMRCLTEWGLSSKLFTLTLDNASNNTAACQELVK---T 260
           +KK++++    YP    A+  A+  C++EWGL  KLF +T ++ ++N+A   E ++    
Sbjct: 263 QKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASNSAV--ENIRPQLC 320

Query: 261 LKDELVLEGKHFHVRCCAHILNLLVQDGMRVIRAAIDKIREILKYIEHSPSRIQAFNSIA 320
           +K+  +L+G+     C A     L +D +   +  I  IR+ +K+++ S S  + F  + 
Sbjct: 321 IKNPGILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELK 380

Query: 321 SSKSLPPKSGFTLDVPTRWNSTFKMIREILPYKAILN--SYASENCELLPTDEEWLHAES 378
               +P +   +LD  T+WN+T+ M+      K + +    A  + +  P+ E+W H E+
Sbjct: 381 EQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRHVEA 440

Query: 379 ICEFLKAFEEATRGVSAHRTPTAHTFLPHVLCIRHALSDPDWQTSDLLKRLAAPMHTKFA 438
           +C FLK   EA   + +   P+A TF   V   +  LS         +  +A  M  K  
Sbjct: 441 LCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVD 500

Query: 439 KYWDEKLANNFNLALVITTVLDPRRKRDYLDFFYEKVSPHGSNVESKVDSIIEEMKSYFH 498
           KYW      + +L L +  V+DPR K   ++F + K+   G +    + ++ + +   F 
Sbjct: 501 KYW-----RDCSLVLAMAVVMDPRFKMKLVEFSFSKI--FGEDAGKNIKTVDDGIHELFT 553

Query: 499 VYEGIARKMGVSYMSQSSERVSVVGSPVLGKRKLEHEFTLFKSNRKVARTQKSEIDTYLE 558
            Y  +      +     ++ +S   + ++                   +  KSE+D YL+
Sbjct: 554 EYMALPSPQNTTSEGGKADGLSDFDTYIM---------------ETTGQNLKSELDQYLD 598

Query: 559 EVCEDDSEDFDVLAWWKKNSKKFPVLAIMARDFLAIPLSTVPSESAFSSGGRILGDTRSS 618
           E      ++FDVL WWK+N  K+P L+ MARD L+IP+S    +  F    R + + ++S
Sbjct: 599 ETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTS 658

Query: 619 LTPEMLEALL 628
           L PE +EAL+
Sbjct: 659 LRPETVEALI 668



>AT1G18560.1 | chr1:6385614-6388005 FORWARD LENGTH=691
          Length = 690

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/592 (22%), Positives = 251/592 (42%), Gaps = 69/592 (11%)

Query: 49  QCKYCGLMLSATRKSGTSHLINHICESCPLVDGEVRNRFISTVRKQPVENFVFDPKKTEE 108
           +CK+CG   S    +G  +L  H+    P  D    +   S+   Q     V  P +++ 
Sbjct: 71  KCKFCGQSYSIATATG--NLGRHLTNRHPGYDKAAADVVTSSSVPQ-TPPAVVKPSQSQS 127

Query: 109 ------------LMIKYFIHAEIPFHKIEDPYLDDWMASMQPTFKLVGRQSIRDKIYNYY 156
                       L++K+   + +P   +++ +L +    ++P+ +L   +  +  +   +
Sbjct: 128 KVPQLDYDHLNWLVLKWLALSSLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVF 187

Query: 157 NRLKQELHAELENLDSRVCLTSDMWTSNQNLGYMVVTAHYVDAEFKMKKKIISLKPVKYP 216
             ++ ++   LE++ S+V +T   W S +N+ YM VT  ++D  +   + ++ +  + YP
Sbjct: 188 TSMRGDVKTTLEHIQSKVSVTLSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYP 247

Query: 217 HTSFAIEEAMMRCLTEWGLSSKLFTLTLDNASNNTAACQELVKTLKDELVLEGKHFHVRC 276
                I  ++++ L  + +  ++   T DN+ N   AC  L +    + VL     ++ C
Sbjct: 248 SGGSEIYNSLLKVLKTYAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVL--PFCYIPC 305

Query: 277 CAHILNLLVQDGMRVIRAAIDKIREILKYIEHSPSRIQAFNSIASSKSLPPKSGFTLDVP 336
            A  LN ++ +G+  I+  I K+RE  + +  S      F  + ++          +D  
Sbjct: 306 AAQTLNDIIDEGLATIKPIISKVREFTQELNASTELSDDFIQLTTAYQ-EGNWKLPIDAS 364

Query: 337 TRWNSTFKMIREILPYKAILNSY------ASENCELLPTDEEWLHAESICEF---LKAFE 387
           +RW+  ++M+  +      L+S       A EN  +L + E+  +A +I      L +F 
Sbjct: 365 SRWSGNYQMVNILCKASKSLDSVIRKNEDALENRMMLSSVEK--NAVTIVHNYLDLDSFH 422

Query: 388 EATRGVSAHRTPT---AHTFLPH----VLCIRHALSDPDWQTSDLLKRLAAPMHTKFAKY 440
           + T  +  ++  T   A  F+ +    +   + +  +PDW     L+  A  M  K A+ 
Sbjct: 423 KTTNDMCTNKDLTVGLALLFMDNISEMITTCQKSCHNPDW-----LRTCAESMAQK-ARS 476

Query: 441 WDEKLANNFNLALVITTVLDPRRKRDYLDFFYEKVSPHGSNVESKVDSIIEEMKSYF--- 497
           ++ ++ N F     IT +LDPR K +Y+        P   N+ES +D    E +S+F   
Sbjct: 477 YNTQVCNVFTY---ITAILDPRIKTEYI--------PETINLESYID----EARSHFIRN 521

Query: 498 HVYEGIARKMGVSYMSQSSERVSVVGSPVLGKRKLEHEFTLFKSNRKVARTQKSEIDTYL 557
           +        M   Y  Q  +          G      E    K    ++     E+  YL
Sbjct: 522 YSSSHFTSSMTSGYRPQEVDEGG-------GNISFAEEIARRKRRGSMSNNVVDELTQYL 574

Query: 558 EEVCEDDSEDFDVLAWWKKNSKKFPVLAIMARDFLAIPLSTVPSESAFSSGG 609
            E         DVL WWK NS ++P L+ MARDFLA+  ++   E  F   G
Sbjct: 575 SESIV--PMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKG 624



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,822,464
Number of extensions: 626589
Number of successful extensions: 1683
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1675
Number of HSP's successfully gapped: 2
Length of query: 685
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 580
Effective length of database: 8,227,889
Effective search space: 4772175620
Effective search space used: 4772175620
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)