BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0799500 Os01g0799500|AK109346
(391 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12710.1 | chr3:4040572-4041828 REVERSE LENGTH=313 313 1e-85
AT5G44680.1 | chr5:18024461-18025893 REVERSE LENGTH=354 312 2e-85
AT1G15970.1 | chr1:5486544-5488494 REVERSE LENGTH=353 217 1e-56
AT1G75090.1 | chr1:28187647-28189612 REVERSE LENGTH=330 214 5e-56
AT1G13635.1 | chr1:4674248-4675784 FORWARD LENGTH=312 213 2e-55
AT1G80850.1 | chr1:30385607-30387272 REVERSE LENGTH=328 211 5e-55
AT5G57970.1 | chr5:23467316-23468910 FORWARD LENGTH=348 210 1e-54
>AT3G12710.1 | chr3:4040572-4041828 REVERSE LENGTH=313
Length = 312
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/275 (54%), Positives = 195/275 (70%), Gaps = 13/275 (4%)
Query: 113 GGLDRSRKPAKKGGAAVLPVVTFAGLEAYEPAGSIAAAQREHVAMAQAQRKMRIAHYGRT 172
G L+R + + K G + ++ E GSIAA +RE VA QA RK++IAHYGR+
Sbjct: 45 GSLERKKSKSFKEGDS------YSSWLITEAPGSIAAVRREQVAAQQALRKLKIAHYGRS 98
Query: 173 ASFSRVEGKVSATATGAAELVAGAVTGHDEKRCSFITPYSDPLYVAYHDEEWGVPVRDDE 232
S ++ T++ L+ H + RCSF+TP SDP+YVAYHDEEWGVPV DD+
Sbjct: 99 KS------TINFTSSKVVPLLNPNPNPHPQ-RCSFLTPTSDPIYVAYHDEEWGVPVHDDK 151
Query: 233 LLFEMLTLSGVQVGADWTSILKRRHVYREAFSGFNVDAVAKYTEKQMASLSAEFGLDLGT 292
LFE+LTLSG QVG+DWTS L++RH YR+AF F + VAK TEK+M ++S E+ +++
Sbjct: 152 TLFELLTLSGAQVGSDWTSTLRKRHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMSK 211
Query: 293 IRGAVNNACRISEVRRDFGSFSKYVWAFVNNKPLSPSYKYSRKIPVKTSKSESISKDMVR 352
+RG V NA +I E+++ F S KY+W FVN+KP+S +YK KIPVKTSKSESISKDMVR
Sbjct: 212 VRGVVENAKKIVEIKKAFVSLEKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVR 271
Query: 353 RGFRFVGPTVIHSFMQAVGLTNDHLVSCPRHRVCS 387
RGFRFVGPTV+HSFMQA GLTNDHL++C RH C+
Sbjct: 272 RGFRFVGPTVVHSFMQAAGLTNDHLITCCRHAPCT 306
>AT5G44680.1 | chr5:18024461-18025893 REVERSE LENGTH=354
Length = 353
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 145/267 (54%), Positives = 190/267 (71%), Gaps = 18/267 (6%)
Query: 125 GGAAVLPVVTFAGLEAYEPAGSIAAAQREHVAMAQAQRKMRIAHYGRTASFSRVEGKVSA 184
G V+P+V + GSIAAA+RE VAM Q +RK +I+HYGR S E ++
Sbjct: 104 GYKEVMPMVIVQ-----KQPGSIAAARREEVAMKQEERKKKISHYGRIKSVKSNEKNLN- 157
Query: 185 TATGAAELVAGAVTGHDEKRCSFITPYSDPLYVAYHDEEWGVPVRDDELLFEMLTLSGVQ 244
V +KRCSFIT SDP+YVAYHD+EWGVPV DD LLFE+L L+G Q
Sbjct: 158 ------------VEHEKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQ 205
Query: 245 VGADWTSILKRRHVYREAFSGFNVDAVAKYTEKQMASLSAEFGLDLGTIRGAVNNACRIS 304
VG+DWTS+LKRR+ +REAFSGF + VA + EK++ S+ ++G++L + V+NA +I
Sbjct: 206 VGSDWTSVLKRRNTFREAFSGFEAELVADFNEKKIQSIVNDYGINLSQVLAVVDNAKQIL 265
Query: 305 EVRRDFGSFSKYVWAFVNNKPLSPSYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIH 364
+V+RD GSF+KY+W F+ +KP++ Y +KIPVKTSKSE+ISKDMVRRGFRFVGPTVIH
Sbjct: 266 KVKRDLGSFNKYIWGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIH 325
Query: 365 SFMQAVGLTNDHLVSCPRHRVCSSSSA 391
S MQA GLTNDHL++CPRH C++ +A
Sbjct: 326 SLMQAAGLTNDHLITCPRHLECTAMAA 352
>AT1G15970.1 | chr1:5486544-5488494 REVERSE LENGTH=353
Length = 352
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 177 RVEGKVSATATGAA----ELVAGAVTGHDEKRCSFITPYSDPLYVAYHDEEWGVPVRDDE 232
R G VS+T + E V+G KRC++ITP +DP YVA+HDEEWGVPV DD+
Sbjct: 115 RRSGSVSSTRKLSVGKEEEKVSGDCFADGRKRCAWITPKADPCYVAFHDEEWGVPVHDDK 174
Query: 233 LLFEMLTLSGVQVGADWTSILKRRHVYREAFSGFNVDAVAKYTEKQMAS--LSAEFGLDL 290
LFE+L LSG WT IL RRH+ RE F F+ AVA+ +K++ + +A L
Sbjct: 175 KLFELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAPGTAAISLLSE 234
Query: 291 GTIRGAVNNACRISEVRRDFGSFSKYVWAFVNNKPLSPSYKYSRKIPVKTSKSESISKDM 350
IR ++N+ + ++ + GS KY+W FVNNKP ++Y R++PVKTSK+E ISKD+
Sbjct: 235 VKIRSILDNSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKTSKAEFISKDL 294
Query: 351 VRRGFRFVGPTVIHSFMQAVGLTNDHLVSCPRHRVC 386
VRRGFR V PTVI+SFMQA GLTNDHL+ C R++ C
Sbjct: 295 VRRGFRSVSPTVIYSFMQAAGLTNDHLIGCFRYQDC 330
>AT1G75090.1 | chr1:28187647-28189612 REVERSE LENGTH=330
Length = 329
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 134/187 (71%), Gaps = 2/187 (1%)
Query: 203 KRCSFITPYSDPLYVAYHDEEWGVPVRDDELLFEMLTLSGVQVGADWTSILKRRHVYREA 262
KRC +ITP SDP+YV +HDEEWGVPVRDD+ LFE+L S W SIL+RR +R+
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178
Query: 263 FSGFNVDAVAKYTEKQMASLSAEFGLDLG--TIRGAVNNACRISEVRRDFGSFSKYVWAF 320
F F+ A+A++TEK++ SL L L +R V NA + +V+++FGSFS Y W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238
Query: 321 VNNKPLSPSYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLVSC 380
VN+KPL Y+Y R++PVK+ K+E ISKDM++RGFR VGPTV++SF+QA G+ NDHL +C
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTAC 298
Query: 381 PRHRVCS 387
R++ C+
Sbjct: 299 FRYQECN 305
>AT1G13635.1 | chr1:4674248-4675784 FORWARD LENGTH=312
Length = 311
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 140/200 (70%), Gaps = 2/200 (1%)
Query: 191 ELVAGAVTGHDEKRCSFITPYSDPLYVAYHDEEWGVPVRDDELLFEMLTLSGVQVGADWT 250
+L + + KRC++IT SD +YV +HD++WGVPV DD LLFE L +SG+ + +WT
Sbjct: 103 QLCQDFNSSDEPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWT 162
Query: 251 SILKRRHVYREAFSGFNVDAVAKYTEKQMASLSAEFGLDL--GTIRGAVNNACRISEVRR 308
ILKR+ +REAF F+ + VAK EK++A +++ + L +R V+NA I++V
Sbjct: 163 EILKRKEHFREAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVN 222
Query: 309 DFGSFSKYVWAFVNNKPLSPSYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQ 368
+FGSFS +VW F++ KP+ +KYSR +P+++ K+E ISKDM++RGFRFVGP ++HSFMQ
Sbjct: 223 EFGSFSSFVWGFMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQ 282
Query: 369 AVGLTNDHLVSCPRHRVCSS 388
A GLT DHLV C RH C S
Sbjct: 283 AAGLTIDHLVDCFRHGDCVS 302
>AT1G80850.1 | chr1:30385607-30387272 REVERSE LENGTH=328
Length = 327
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 128/186 (68%), Gaps = 2/186 (1%)
Query: 203 KRCSFITPYSDPLYVAYHDEEWGVPVRDDELLFEMLTLSGVQVGADWTSILKRRHVYREA 262
KRC++ITP SD Y+A+HDEEWGVPV DD+ LFE+L+LSG W IL +R ++RE
Sbjct: 134 KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFREV 193
Query: 263 FSGFNVDAVAKYTEKQMAS--LSAEFGLDLGTIRGAVNNACRISEVRRDFGSFSKYVWAF 320
F F+ A+++ T K++ S ++A L +R + NA ++ ++ FGSF KY+W F
Sbjct: 194 FMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWNF 253
Query: 321 VNNKPLSPSYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLVSC 380
VN KP ++Y R++PVKTSK+E ISKD+VRRGFR V PTVI+SFMQ GLTNDHL C
Sbjct: 254 VNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTCC 313
Query: 381 PRHRVC 386
RH C
Sbjct: 314 FRHHDC 319
>AT5G57970.1 | chr5:23467316-23468910 FORWARD LENGTH=348
Length = 347
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 131/188 (69%), Gaps = 4/188 (2%)
Query: 202 EKRCSFITPYSDPLYVAYHDEEWGVPVRDDELLFEMLTLSGVQVGADWTSILKRRHVYRE 261
+KRC+++TP SDP Y+ +HDEEWGVPV DD+ LFE+L LSG W +IL +R +RE
Sbjct: 153 KKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFRE 212
Query: 262 AFSGFNVDAVAKYTEKQM---ASLSAEFGLDLGTIRGAVNNACRISEVRRDFGSFSKYVW 318
F+ F+ +A+ K EK++ S ++ DL +R + NA +I +V ++GSF KY+W
Sbjct: 213 VFADFDPNAIVKINEKKIIGPGSPASTLLSDLK-LRAVIENARQILKVIEEYGSFDKYIW 271
Query: 319 AFVNNKPLSPSYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLV 378
+FV NK + ++Y R++P KT K+E ISKD+VRRGFR VGPTV++SFMQA G+TNDHL
Sbjct: 272 SFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLT 331
Query: 379 SCPRHRVC 386
SC R C
Sbjct: 332 SCFRFHHC 339
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,903,783
Number of extensions: 255165
Number of successful extensions: 601
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 594
Number of HSP's successfully gapped: 7
Length of query: 391
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,337,553
Effective search space: 2417890370
Effective search space used: 2417890370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)