BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0794500 Os01g0794500|J090066N21
         (115 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54290.1  | chr1:20268710-20269390 REVERSE LENGTH=114          209   2e-55
AT4G27130.1  | chr4:13604814-13605525 REVERSE LENGTH=114          207   1e-54
AT5G54760.1  | chr5:22244732-22245517 FORWARD LENGTH=114          205   4e-54
AT5G54940.1  | chr5:22308420-22308758 REVERSE LENGTH=113          175   4e-45

>AT1G54290.1 | chr1:20268710-20269390 REVERSE LENGTH=114
          Length = 113

 Score =  209 bits (532), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 99/115 (86%), Positives = 112/115 (97%), Gaps = 2/115 (1%)

Query: 1   MSDLDVQLPSAFDPFAEANAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60
           MSDL+VQ+P+AFDPFA+ANAEDS  GAG+K+YVH+R+QQRNGRKSLTTVQGLKKEYSY+K
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDS--GAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSK 58

Query: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKESIKIHGF 115
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+VKK++IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113



>AT4G27130.1 | chr4:13604814-13605525 REVERSE LENGTH=114
          Length = 113

 Score =  207 bits (526), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/115 (85%), Positives = 110/115 (95%), Gaps = 2/115 (1%)

Query: 1   MSDLDVQLPSAFDPFAEANAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60
           MS+LD Q+P+AFDPFA+ANAEDS  GAG+K+YVH+R+QQRNGRKSLTTVQGLKKEYSY K
Sbjct: 1   MSELDSQVPTAFDPFADANAEDS--GAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58

Query: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKESIKIHGF 115
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+VKK++IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113



>AT5G54760.1 | chr5:22244732-22245517 FORWARD LENGTH=114
          Length = 113

 Score =  205 bits (521), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 97/115 (84%), Positives = 109/115 (94%), Gaps = 2/115 (1%)

Query: 1   MSDLDVQLPSAFDPFAEANAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60
           MS+LD Q+P+AFDPFA+AN EDS  GAG+K+YVH+R+QQRNGRKSLTTVQGLKKEYSY K
Sbjct: 1   MSELDSQVPTAFDPFADANVEDS--GAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58

Query: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKESIKIHGF 115
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+VKK++IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113



>AT5G54940.1 | chr5:22308420-22308758 REVERSE LENGTH=113
          Length = 112

 Score =  175 bits (443), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 82/115 (71%), Positives = 98/115 (85%), Gaps = 3/115 (2%)

Query: 1   MSDLDVQLPSAFDPFAEANAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60
           M +LD+Q+PSA+DPFAEA   D+    G+K+ +H+RIQQRNG+KSLTTVQGLKKEYSY +
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDA---PGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYER 57

Query: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKESIKIHGF 115
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRK V+ FLVQ GI KK+ IKIHGF
Sbjct: 58  ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.133    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,448,300
Number of extensions: 91576
Number of successful extensions: 228
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 224
Number of HSP's successfully gapped: 4
Length of query: 115
Length of database: 11,106,569
Length adjustment: 84
Effective length of query: 31
Effective length of database: 8,803,625
Effective search space: 272912375
Effective search space used: 272912375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)