BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0778700 Os01g0778700|AK064933
         (438 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14950.1  | chr4:8545517-8547722 FORWARD LENGTH=417            511   e-145
AT1G05360.1  | chr1:1564816-1567278 FORWARD LENGTH=417            464   e-131

>AT4G14950.1 | chr4:8545517-8547722 FORWARD LENGTH=417
          Length = 416

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/405 (60%), Positives = 306/405 (75%), Gaps = 3/405 (0%)

Query: 26  ISEIREKHKLELENLTLTKHPFRTLRFFMLAMLQYLKRLATYILSKGAXXXXXXXXXXAP 85
           IS +REKH+ E+ENLTLT  P  TL+ F+ A +QY+KR  +Y+L+ G             
Sbjct: 15  ISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVS 74

Query: 86  GILLAVTDGLHKKHVQEFLNYARFVLWWVSLGVASSIGLGSGLHTFVLYLGPHIALFTIK 145
           G LL   DG H KHV+E L Y R+ LWW++LGVASSIGLGSGLHTFVLYLGPHIALFT+K
Sbjct: 75  GGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLK 134

Query: 146 AVQCGRIDLKTAPYDTIQLKQGPSWLDKKCSDFGPPVYQASAHSVRIPVFELLPQVQLEA 205
           A  CGR+DLK+APYDTIQLK+ PSWLDK CS+FGPP+  ++A S R+P+  +LPQVQLEA
Sbjct: 135 ATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGS-RVPLTSILPQVQLEA 193

Query: 206 VLWGIGTALGELPPYFISRAARLSGSEPEAVKELDAAASDEHGPIASTLNRTKRWLLSHS 265
           +LWGIGTALGELPPYFISRAA +SGS  + ++ELD +++++ G +A+ LNR KRWLL+HS
Sbjct: 194 ILWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHS 253

Query: 266 QHLNFITILILASVPNPLFDLAGIMCGQFGIPFWEFFFATLIGKAIIKTHIQTLFIISLC 325
           QHLNF T+L+LASVPNPLFDLAGIMCGQFGIPFWEFF ATLIGKAIIKTHIQT+FII +C
Sbjct: 254 QHLNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVC 313

Query: 326 NNQLLYLMEKELIWIFGHIPGFSASLPSVIAKLHSAKDKYLSTPTSATSSSKMEDTQWNF 385
           NNQLL  ME ELIWI  H+PG ++ LP + AKLH+ K+KY+  P+   S  K++  +W+F
Sbjct: 314 NNQLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVK--KWDF 371

Query: 386 SXXXXXXXXXXXXXXXXXIKIVTSTAQEYLKKQQDIEMELITDSS 430
           S                 +KIVT+TAQ +LKK+Q+ EM  +T S 
Sbjct: 372 SFASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLTHSD 416



>AT1G05360.1 | chr1:1564816-1567278 FORWARD LENGTH=417
          Length = 416

 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/413 (57%), Positives = 294/413 (71%), Gaps = 12/413 (2%)

Query: 16  RGSSKAGGGVISEIREKHKLELENLTLTKHPFRTLRFFMLAMLQYLKRLATYILSKGAXX 75
           R SSK     IS +REKH+ +LE LTLT  PF+TLR F++A+  Y++R ++Y+L+     
Sbjct: 6   RASSKTPA--ISGLREKHQQDLEKLTLTSQPFKTLRLFVVAVFLYVRRWSSYLLANVGWL 63

Query: 76  XXXXXXXXAPGILLAVTDGLHKKHVQEFLNYARFVLWWVSLGVASSIGLGSGLHTFVLYL 135
                   A   LL   DG H KHV+E   Y RF LWW+ LGVASSIGLGSGLHTFVLYL
Sbjct: 64  ILFCSIFVAFAALLVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGSGLHTFVLYL 123

Query: 136 GPHIALFTIKAVQCGRIDLKTAPYDTIQLKQGPSWLDKKCSDFGPPVYQASAHSVRIPVF 195
           GPHIALFTIK +QCGR+DLK+A YDTIQLK+ PSWLDK C +FG PV+ +      +P+ 
Sbjct: 124 GPHIALFTIKVMQCGRVDLKSAIYDTIQLKRSPSWLDKPCHEFGSPVFSSG-----VPLS 178

Query: 196 ELLPQVQLEAVLWGIGTALGELPPYFISRAARLSGSEPEAVKELDAAASDEHGPIASTLN 255
            +LPQVQ+EA+LWG+GTALGELPPYFISRAA LSG +   +KEL+  + D++G IA  +N
Sbjct: 179 SILPQVQIEAILWGLGTALGELPPYFISRAASLSGGK---MKELETCSGDDNGFIAKRVN 235

Query: 256 RTKRWLLSHSQHLNFITILILASVPNPLFDLAGIMCGQFGIPFWEFFFATLIGKAIIKTH 315
           + K WLLSHSQ+LNF TILILASVPNPLFDLAGIMCGQF  PFWEFF ATLIGKAIIKTH
Sbjct: 236 QIKSWLLSHSQYLNFFTILILASVPNPLFDLAGIMCGQFEKPFWEFFLATLIGKAIIKTH 295

Query: 316 IQTLFIISLCNNQLLYLMEKELIWIFGHIPGFSASLPSVIAKLHSAKDKYLSTPTSATSS 375
           IQT+FII +CNNQLL  +E ELI+I   +PGF+++LP + AKL   K+KYL    S   S
Sbjct: 296 IQTVFIICVCNNQLLDWVENELIYILSFVPGFASALPELTAKLRLMKEKYLI--ASPPVS 353

Query: 376 SKMEDTQWNFSXXXXXXXXXXXXXXXXXIKIVTSTAQEYLKKQQDIEMELITD 428
           S +   +W+ S                  +IVTSTAQ YLKKQQ+ E++ +T+
Sbjct: 354 SDINVKKWDLSFASVWNGVVWLMLLNFFGQIVTSTAQRYLKKQQEEELDALTN 406



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,687,537
Number of extensions: 331225
Number of successful extensions: 717
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 712
Number of HSP's successfully gapped: 2
Length of query: 438
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 336
Effective length of database: 8,310,137
Effective search space: 2792206032
Effective search space used: 2792206032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)