BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0770400 Os01g0770400|AK061585
(396 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46170.1 | chr5:18715638-18716825 REVERSE LENGTH=396 352 2e-97
AT4G18380.1 | chr4:10157957-10159099 FORWARD LENGTH=381 337 6e-93
AT1G30200.2 | chr1:10625147-10626286 FORWARD LENGTH=380 330 9e-91
AT1G78100.1 | chr1:29387907-29388911 FORWARD LENGTH=335 137 9e-33
AT1G22220.1 | chr1:7846694-7847638 FORWARD LENGTH=315 131 6e-31
>AT5G46170.1 | chr5:18715638-18716825 REVERSE LENGTH=396
Length = 395
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/393 (51%), Positives = 240/393 (61%), Gaps = 32/393 (8%)
Query: 14 DQFERLPDEVLLDVFGRIGDVKALGRCALVSRRFHALVPLVDSVFVRVDCVISDDXXXXX 73
D F+ LPD +LL VF +IGDVKALGRC +VSRRFH+LVP VD+V VRVDCVIS
Sbjct: 25 DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVIS------- 77
Query: 74 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGGIVRPIQALGQILXXXXXXXXXXXXXXX 133
V+GGIV+P+QALGQ L
Sbjct: 78 --DDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSGSS 135
Query: 134 XXXXXXXXX----------XXXXXXXEVLRSFKELRRLHIELPTGELGIEDGVLLKWKAD 183
+VL++F E+R L IELP+GELGI+DGVLLKW+A+
Sbjct: 136 SSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAE 195
Query: 184 FGSTLGSCVILGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPDELGNIPESLYTNGG 243
FGSTL +CVILG D+ G+IPES YTNGG
Sbjct: 196 FGSTLDNCVILGASSVIPPNPMRVSQACDTTTVVEAPGSGS----DDNGSIPESFYTNGG 251
Query: 244 LKLRVVWTISSLIAASARHYLLQPIIADHSTLESLDLTDADGQGVLTMDKRQLQELRVRP 303
LKLRVVWTISSLIAASARHYLLQPIIA+H TL+SL LTD+DGQGVL M++ QL+ELRV+P
Sbjct: 252 LKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKP 311
Query: 304 VSASGNSHRTLMPALSMRLWYAPHIELPGGQLLKGATLVAIRPSEDVLREGGGIEVAGPT 363
++AS S RTL+PAL+MRLWYAP +ELP G +LKGATLVAIRPSE +E I
Sbjct: 312 LAASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSES-KKEVSDI------ 364
Query: 364 GASWILDAFEEPYRTAAQVLLKRRTYSLEMNSF 396
SW+ AFEEPY TAA++L+KRRTY LEMNSF
Sbjct: 365 --SWVSSAFEEPYETAAKMLVKRRTYCLEMNSF 395
>AT4G18380.1 | chr4:10157957-10159099 FORWARD LENGTH=381
Length = 380
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 191/390 (48%), Positives = 234/390 (60%), Gaps = 39/390 (10%)
Query: 14 DQFERLPDEVLLDVFGRIGDVKALGRCALVSRRFHALVPLVDSVFVRVDCVISDDXXXXX 73
D F+ LPD +LL +F IGDVKALGRC++VS+RFH+L+P V++VFVRVDCVIS
Sbjct: 23 DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVIS------- 75
Query: 74 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGGIVRPIQALGQILXXXXXXXXXXXXXXX 133
+ + +P+QALGQ L
Sbjct: 76 ------DDDSSSLLSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPS 129
Query: 134 XXXXX-------XXXXXXXXXXXEVLRSFKELRRLHIELPTGELGIEDGVLLKWKADFGS 186
+VL++F E++ L IELP+GELGI+DGVLLKW+A+FGS
Sbjct: 130 SLLISGGDDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGS 189
Query: 187 TLGSCVILGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPDELGNIPESLYTNGGLKL 246
TL +CVILG ++ G+IPES YTNGGLKL
Sbjct: 190 TLENCVILGASSVIPPTNSDKTEASSAPVAAV----------EDNGSIPESFYTNGGLKL 239
Query: 247 RVVWTISSLIAASARHYLLQPIIADHSTLESLDLTDADGQGVLTMDKRQLQELRVRPVSA 306
RVVWTISSLIAASARHYLLQPIIA+H TL+SL LTD DGQGVL M++ QL+ELRV+P+SA
Sbjct: 240 RVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSA 299
Query: 307 SGNSHRTLMPALSMRLWYAPHIELPGGQLLKGATLVAIRPSEDVLREGGGIEVAGPTGAS 366
S S RTL+PAL+MRLWYAP +ELP G +LKGATLVAIRPSE EV S
Sbjct: 300 SSASKRTLVPALNMRLWYAPSLELPDGTVLKGATLVAIRPSE------SKKEVC---DVS 350
Query: 367 WILDAFEEPYRTAAQVLLKRRTYSLEMNSF 396
W+ AF+EPY AA++L+KRRTY LEMNSF
Sbjct: 351 WVSSAFDEPYGVAAKMLVKRRTYCLEMNSF 380
>AT1G30200.2 | chr1:10625147-10626286 FORWARD LENGTH=380
Length = 379
Score = 330 bits (845), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 194/383 (50%), Positives = 232/383 (60%), Gaps = 27/383 (7%)
Query: 14 DQFERLPDEVLLDVFGRIGDVKALGRCALVSRRFHALVPLVDSVFVRVDCVISDDXXXXX 73
D F+ LPD +LL +F ++ DVK LGRC +VSRRFH+LVP V++V VRVDCVISDD
Sbjct: 24 DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83
Query: 74 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGGIVRPIQALGQILXXXXXXXXXXXXXXX 133
V I +P Q LGQIL
Sbjct: 84 DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143
Query: 134 XXXXXXXXXXXXXXXXEVLRSFKELRRLHIELPTGELGIEDGVLLKWKADFGSTLGSCVI 193
+VL++F E+R L IELPTGELGIEDG+LLKW+ADFGSTL +C+I
Sbjct: 144 INDEIGVTHHSPT---QVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMI 200
Query: 194 LGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPDELGNIPESLYTNGGLKLRVVWTIS 253
LG ++ GNIPES YTNGGLKLRVVWTIS
Sbjct: 201 LGASSVIQSNSVKNHENSVD---------------EDNGNIPESFYTNGGLKLRVVWTIS 245
Query: 254 SLIAASARHYLLQPIIADHSTLESLDLTDADGQGVLTMDKRQLQELRVRPVSASGNSHRT 313
SLIAASARHYLLQPII +H +L+ L L+DADGQGVL M++ QL+ELRV P+SAS S RT
Sbjct: 246 SLIAASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRT 305
Query: 314 LMPALSMRLWYAPHIELPGGQLLKGATLVAIRPSEDVLREGGGIEVAGPTGASWILDAFE 373
L+PAL+MRLWYAP ++LP G +LKGATLVAIRPSE EV ASW+ DAFE
Sbjct: 306 LVPALNMRLWYAPELDLPDGTVLKGATLVAIRPSE------SKKEVC---DASWLSDAFE 356
Query: 374 EPYRTAAQVLLKRRTYSLEMNSF 396
EP+ T A++L+KRRTY LEMNSF
Sbjct: 357 EPFGTVAKMLIKRRTYCLEMNSF 379
>AT1G78100.1 | chr1:29387907-29388911 FORWARD LENGTH=335
Length = 334
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 124/252 (49%), Gaps = 26/252 (10%)
Query: 150 EVLRSFKELRRLHIELPTGELGIEDGVLLKWKADFGSTLGSCVILGXXXXXXXXXXXXXX 209
++L F+ +R L +EL G++ +E G +KWKA+FG TL SCVI+
Sbjct: 104 QILSGFERIRNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEA 163
Query: 210 XXXXXXXXXXXXXXXXREPDELGNIPESLYTNGGLKLRVVWTISSLIAASARHYLLQPII 269
G + GLK RVVWTIS+L+AAS RHYL++ ++
Sbjct: 164 AAVVD-----------------GVVESDSEFVCGLKTRVVWTISALMAASTRHYLMRDLV 206
Query: 270 ADHSTLESLDLTDADGQGVLTMDKRQLQELRVRPVSASGNS-----HRTLMPALSMRLWY 324
DH +E L + D+DG+G + MD ++E R V RT++P++ M + +
Sbjct: 207 KDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRH 266
Query: 325 APHIELPGGQLLKGATLVAIRPSEDVLREGGGIEVAGPTGASWILDAFEEPYRTAAQVLL 384
AP + L G L+ ATLV +RP+ V + +E+ A D + Y A LL
Sbjct: 267 APSLMLKSGICLEAATLVVVRPT-GVASDDNDVELVTEAFAG---DGDDCMYGEAVTALL 322
Query: 385 KRRTYSLEMNSF 396
KRR LEMNSF
Sbjct: 323 KRRRNVLEMNSF 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 14 DQFERLPDEVLLDVFGRIGDVKALGRCALVSRRFHALVPLVDSVFVRVDCVI 65
D F+ +PD V++D+ R+GDVK L RC VS+RF++L +S+ +++D ++
Sbjct: 2 DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQIL 53
>AT1G22220.1 | chr1:7846694-7847638 FORWARD LENGTH=315
Length = 314
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 51/260 (19%)
Query: 150 EVLRSFKELRRLHIELPTGELGIEDGVLLKWKADFGSTLGSCVILGXXXXXXXXXXXXXX 209
++L F +R L +ELP G++ +E G +KWKA+FG TL SCVI+
Sbjct: 93 KILSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSA---------- 142
Query: 210 XXXXXXXXXXXXXXXXREPDELGNIPESLYTNG--------GLKLRVVWTISSLIAASAR 261
G + + G GLK RVVWTIS+L+AAS+R
Sbjct: 143 ----------------------GTVSSPVAVEGESDAEFVTGLKTRVVWTISALMAASSR 180
Query: 262 HYLLQPIIADHSTLESLDLTDADGQGVLTMDKRQLQEL-----RVRPVSASGNSHRTLMP 316
HYL++ ++ +H +ESL + D + +G + M++ L+EL RV + R+++P
Sbjct: 181 HYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKNKRSVVP 240
Query: 317 ALSMRLWYAPHIELPGGQLLKGATLVAIRPSEDVLREGGGIEVAGPTGASWILDAFEEPY 376
++ M + +AP ++L G L+ ATLV +RPS G E+A +++ D Y
Sbjct: 241 SVRMSMRHAPSLKLKSGICLESATLVIVRPSGADFEVGDDAELA---TEAFVGDCM---Y 294
Query: 377 RTAAQVLLKRRTYSLEMNSF 396
A LLK + +LEMNSF
Sbjct: 295 GEAVVALLKCKKNALEMNSF 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 41/54 (75%)
Query: 14 DQFERLPDEVLLDVFGRIGDVKALGRCALVSRRFHALVPLVDSVFVRVDCVISD 67
D F+ LPD +++D+ ++GDVK L RC+ +S+RF++LVP +S+ +R+D +SD
Sbjct: 2 DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSD 55
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.140 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,161,579
Number of extensions: 204008
Number of successful extensions: 486
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 478
Number of HSP's successfully gapped: 15
Length of query: 396
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 295
Effective length of database: 8,337,553
Effective search space: 2459578135
Effective search space used: 2459578135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)