BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0760600 Os01g0760600|AK103586
(460 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11520.1 | chr5:3685257-3687721 REVERSE LENGTH=450 729 0.0
AT5G19550.1 | chr5:6598201-6601597 FORWARD LENGTH=406 717 0.0
AT1G62800.2 | chr1:23253934-23257416 REVERSE LENGTH=406 638 0.0
AT4G31990.3 | chr4:15470876-15473521 REVERSE LENGTH=463 477 e-135
AT2G30970.1 | chr2:13179012-13181686 FORWARD LENGTH=431 428 e-120
>AT5G11520.1 | chr5:3685257-3687721 REVERSE LENGTH=450
Length = 449
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/447 (77%), Positives = 387/447 (86%), Gaps = 14/447 (3%)
Query: 14 DRRLSTLVRHLLPXXXXXXXXXXXXXXXXXXXXXLQAFPTMASS--SVFAGLAQAPEDPI 71
DRR+ L+RHL L A PT + SVF+ L QAPEDPI
Sbjct: 13 DRRIGALLRHL------------NSGSDSDNLSSLYASPTSGGTGGSVFSHLVQAPEDPI 60
Query: 72 LGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLA 131
LGVTVAYNKDPSPVK+NLGVGAYRTEEGKPLVLNVVR+AEQ LIN+ +R+KEYLPI GL
Sbjct: 61 LGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLV 120
Query: 132 DFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGN 191
+FNKLSAKLI GADSPAI+ENR+ TV+CLSGTGSLRVGGEFLA+HYH++TIYI QPTWGN
Sbjct: 121 EFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQKTIYITQPTWGN 180
Query: 192 HPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLHACAHNPTGVDPTLD 251
HPK+FTLAGLTV++YRYYDPATRGL+FQGLLEDLG+A G+IVLLHACAHNPTGVDPT+
Sbjct: 181 HPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLHACAHNPTGVDPTIQ 240
Query: 252 QWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGELLMAQSYAKNMGLY 311
QWEQIR+LMRSK L+PFFDSAYQGFASGSLD DA+ +RMFVADGGE L+AQSYAKNMGLY
Sbjct: 241 QWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGECLVAQSYAKNMGLY 300
Query: 312 GERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATILKDSAMFNEWTVEL 371
GERVGALSIVC SADVA RVESQLKLVIRPMYS+PPIHGASIVA IL+D +FNEWT+EL
Sbjct: 301 GERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVILRDKNLFNEWTLEL 360
Query: 372 KGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTS 431
K MADRIISMR+QLF+AL+TR TPGDWSHIIKQIGMFTFTGLN QV+FM +EYHIYMTS
Sbjct: 361 KAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTS 420
Query: 432 DGRISMAGLSGRTIPHLADAIHAAVTK 458
DGRISMAGLS +T+PHLADAIHA VTK
Sbjct: 421 DGRISMAGLSSKTVPHLADAIHAVVTK 447
>AT5G19550.1 | chr5:6598201-6601597 FORWARD LENGTH=406
Length = 405
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/402 (82%), Positives = 370/402 (92%)
Query: 58 SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINN 117
SVF+ +A+APEDPILGVTVAYN DPSPVK+NLGVGAYRTEEGKPLVL+VVR+AEQ L+N+
Sbjct: 3 SVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVND 62
Query: 118 PSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 177
PSRVKEY+PI G++DFNKLSAKLI GADSPAI E+RV TVQCLSGTGSLRVG EFL HY
Sbjct: 63 PSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHY 122
Query: 178 HERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLH 237
H+ IYIP+PTWGNHPKVF LAGL+V +RYYDPATRGLDF+GLLEDLG+APSGAIVLLH
Sbjct: 123 HQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLH 182
Query: 238 ACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGE 297
ACAHNPTGVDPT +QWEQIRQLMRSK+LLPFFDSAYQGFASGSLD DAQSVR FVADGGE
Sbjct: 183 ACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGE 242
Query: 298 LLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATI 357
L+AQSYAKNMGLYGERVGALSIVC SADVA +VESQ+KLV+RPMYS+PPIHGASIVATI
Sbjct: 243 CLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATI 302
Query: 358 LKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSDQ 417
LK S M+N WT+ELK MADRI SMRQQLF+A++ R TPGDWSHIIKQIGMFTFTGLN +Q
Sbjct: 303 LKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQ 362
Query: 418 VAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKL 459
V FM +E+HIYMTSDGRISMAGLS +T+PHLADA+HAAVT+L
Sbjct: 363 VEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMHAAVTRL 404
>AT1G62800.2 | chr1:23253934-23257416 REVERSE LENGTH=406
Length = 405
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/403 (72%), Positives = 345/403 (85%)
Query: 57 SSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLIN 116
+S+ + + APEDP+L V A DPSPVK+NL G YRTEEGKPLVL+VVRRAEQ L N
Sbjct: 2 NSILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLAN 61
Query: 117 NPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARH 176
+ SR KEYLP+ GL +FNKLS KLI G DSPA++ENRV T QCLSGTGSLRVG EFLA H
Sbjct: 62 DLSRDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATH 121
Query: 177 YHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLL 236
E I++P PTWGNHP++FTLAGL+V+ +RYYDP +RGLDF+G+LEDLG+AP GAIV+L
Sbjct: 122 NKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVL 181
Query: 237 HACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGG 296
ACAHNPTGVDPT +QWE+IR+L+RSK+LLPFFDSAYQGFASGSLD DAQ+VRMFVADGG
Sbjct: 182 QACAHNPTGVDPTFEQWEKIRRLVRSKSLLPFFDSAYQGFASGSLDADAQAVRMFVADGG 241
Query: 297 ELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVAT 356
E L+AQSYAKNMGLYGER+G+L+IVC S DVA +VE+Q+ LV+RPMY PPIHGASIVAT
Sbjct: 242 ECLIAQSYAKNMGLYGERIGSLTIVCTSEDVAKKVENQVLLVVRPMYLTPPIHGASIVAT 301
Query: 357 ILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSD 416
ILK+S M+N+WT+ELKGMADRIISMRQQL+ AL+ R TPGDWSHIIK IGMFTFTGL+ +
Sbjct: 302 ILKNSDMYNDWTIELKGMADRIISMRQQLYAALEARGTPGDWSHIIKHIGMFTFTGLSEE 361
Query: 417 QVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKL 459
QV M +EYHIYMT DGRISMA LS +T+P LADAIHA VT++
Sbjct: 362 QVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVVTRI 404
>AT4G31990.3 | chr4:15470876-15473521 REVERSE LENGTH=463
Length = 462
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 222/396 (56%), Positives = 291/396 (73%), Gaps = 2/396 (0%)
Query: 58 SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINN 117
S F G+ AP DPILGV+ A+ D + +K+NLGVGAYRTEE +P VLNVV++AE +++
Sbjct: 51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 110
Query: 118 PSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 177
KEYLPI GLA FNK +A+L+FGA P I+E RVAT+Q LSGTGSLR+ + R++
Sbjct: 111 GDN-KEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYF 169
Query: 178 HERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLH 237
+ I PTWGNH +F A + YRYYDP T GLDF+G++ D+ AP G+ +LLH
Sbjct: 170 PGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLH 229
Query: 238 ACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGE 297
CAHNPTG+DPT +QW +I +++ K +PFFD AYQGFASGSLD+DA SVR+F G E
Sbjct: 230 GCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGME 289
Query: 298 LLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATI 357
+AQSY+KN+GLY ER+GA+++VC SAD A RV+SQLK + RPMYSNPP+HGA IVA +
Sbjct: 290 FFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGARIVANV 349
Query: 358 LKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPG-DWSHIIKQIGMFTFTGLNSD 416
+ D MF+EW E++ MA RI ++RQ+L+D+L +++ G DWS I+KQIGMF+FTGLN
Sbjct: 350 VGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSFTGLNKA 409
Query: 417 QVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAI 452
Q M ++H+YMT DGRIS+AGLS +LADAI
Sbjct: 410 QSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAI 445
>AT2G30970.1 | chr2:13179012-13181686 FORWARD LENGTH=431
Length = 430
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/402 (52%), Positives = 279/402 (69%), Gaps = 3/402 (0%)
Query: 57 SSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLIN 116
SS + + AP+DPILGVT A+ DPSP KVN+GVGAYR + GKP+VL VR AE+ L
Sbjct: 30 SSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAEKRLAG 89
Query: 117 NPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARH 176
S EYLP+ G A L+ KL +G +S I++ R+A VQ LSGTG+ R+ +F R
Sbjct: 90 --STFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADFQKRF 147
Query: 177 YHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLL 236
IYIP PTW NH ++ A + ++Y YY P T+GLDF L++D+ +AP G+ LL
Sbjct: 148 SPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFLL 207
Query: 237 HACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGG 296
HACAHNPTGVDPT +QW +I QL ++K FFD AYQGFASG +DA+S+R+F+ DG
Sbjct: 208 HACAHNPTGVDPTEEQWREISQLFKAKKHFAFFDMAYQGFASGDPARDAKSIRIFLEDGH 267
Query: 297 ELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVAT 356
+ ++QSYAKNMGLYG+RVG LS++C AV V+SQL+ + RPMYSNPP+HGA +V+T
Sbjct: 268 HIGISQSYAKNMGLYGQRVGCLSVLCEDPKQAVAVKSQLQQLARPMYSNPPLHGAQLVST 327
Query: 357 ILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSD 416
IL+D + + W E+K MADRII MR L ++L+ +P W H+ KQIGMF ++GL +
Sbjct: 328 ILEDPELKSLWLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHVTKQIGMFCYSGLTPE 387
Query: 417 QVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTK 458
QV + EYHIYMT +GRISMAG++ + +LA+AIH VTK
Sbjct: 388 QVDRLTSEYHIYMTRNGRISMAGVTTGNVGYLANAIH-EVTK 428
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,078,463
Number of extensions: 362667
Number of successful extensions: 750
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 746
Number of HSP's successfully gapped: 5
Length of query: 460
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 358
Effective length of database: 8,310,137
Effective search space: 2975029046
Effective search space used: 2975029046
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)