BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0749000 Os01g0749000|AK107255
(252 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45690.1 | chr5:18535139-18536259 REVERSE LENGTH=248 275 2e-74
AT4G18920.1 | chr4:10368784-10370086 FORWARD LENGTH=248 265 2e-71
AT1G29680.1 | chr1:10377900-10378931 REVERSE LENGTH=238 238 2e-63
AT1G05510.1 | chr1:1629527-1630690 FORWARD LENGTH=242 169 1e-42
AT2G31985.1 | chr2:13614086-13615619 REVERSE LENGTH=242 168 3e-42
>AT5G45690.1 | chr5:18535139-18536259 REVERSE LENGTH=248
Length = 247
Score = 275 bits (703), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 164/222 (73%), Gaps = 1/222 (0%)
Query: 31 TVDSMLLDKGAAMLQALRPVKHIKQHVCTFALYAHDPRRQVETHHFVSRLNQDVLQCAVY 90
T+ ++++DKGAAM+Q+L+P+K + H+C+FA Y HDP RQ+E + +V RLNQD LQCAVY
Sbjct: 27 TMKTVVMDKGAAMMQSLKPIKQMSLHLCSFACYGHDPSRQIEVNFYVHRLNQDFLQCAVY 86
Query: 91 DADDKHARLIGVEYIVSRKIFDSLPAEEQRLWHSHAHEIKAGLWVSPHVPGMLEKAELEK 150
D D LIG+EYIVS ++F+SL EEQ+LWHSH +EI+ GL V+P VP ++ K ELE
Sbjct: 87 DCDSSKPHLIGIEYIVSERLFESLDPEEQKLWHSHDYEIQTGLLVTPRVPELVAKTELEN 146
Query: 151 MAGTFGKFWCTWQVDRGDRLPLGAPALMVSPQDDPAADVRPDLVRNRDDKYRYSTTELRA 210
+A T+GKFWCTWQ DRGD+LPLGAP+LM+SPQD ++P L++ RDD+Y ST L+
Sbjct: 147 IAKTYGKFWCTWQTDRGDKLPLGAPSLMMSPQDVNMGKIKPGLLKKRDDEYGISTESLKT 206
Query: 211 ARADVAVPAEPRPGQADYWLRHRKGFAVDVVPHEMKCHAPFP 252
+R + P E + ADYW+ H KG AVD++ EM+ APFP
Sbjct: 207 SRVGIMGP-EKKNSMADYWVHHGKGLAVDIIETEMQKLAPFP 247
>AT4G18920.1 | chr4:10368784-10370086 FORWARD LENGTH=248
Length = 247
Score = 265 bits (676), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Query: 30 TTVDSMLLDKGAAMLQALRPVKHIKQHVCTFALYAHDPRRQVETHHFVSRLNQDVLQCAV 89
T + +L+KG AM+Q+++P++ + HVC+FA Y+HDP RQ+E H + R+NQD LQCAV
Sbjct: 26 TKTTTAMLEKGTAMMQSMKPIRQMSLHVCSFACYSHDPGRQIEVHIYGHRVNQDFLQCAV 85
Query: 90 YDADDKHARLIGVEYIVSRKIFDSLPAEEQRLWHSHAHEIKAGLWVSPHVPGMLEKAELE 149
YD++ A LIG+EYIVS K+F+SL EEQ+LWHSH +EI+ L V+P VP ++ K EL+
Sbjct: 86 YDSNSSKAHLIGIEYIVSEKLFESLSPEEQKLWHSHDYEIQMALLVTPRVPELVAKPELK 145
Query: 150 KMAGTFGKFWCTWQVDRGDRLPLGAPALMVSPQDDPAADVRPDLVRNRDDKYRYSTTELR 209
+A ++GKFWCTWQ+DRGD+LPLG P+LMVSPQD ++P+LV+ RD+++ ST L+
Sbjct: 146 NLAKSYGKFWCTWQIDRGDKLPLGVPSLMVSPQDVNLGRIKPELVKKRDEEHGISTESLK 205
Query: 210 AARADVAVPAEPRPGQADYWLRHRKGFAVDVVPHEMKCHAPFP 252
+R + P E + ADYW+R RKGFA+DVV +MK APFP
Sbjct: 206 PSRDGICGP-EKKNLVADYWVRFRKGFALDVVETDMKRTAPFP 247
>AT1G29680.1 | chr1:10377900-10378931 REVERSE LENGTH=238
Length = 237
Score = 238 bits (607), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 154/222 (69%), Gaps = 1/222 (0%)
Query: 31 TVDSMLLDKGAAMLQALRPVKHIKQHVCTFALYAHDPRRQVETHHFVSRLNQDVLQCAVY 90
TV + L+D G+ ++Q PVK + HV TFA+Y D R + THH+V R+N + LQCAVY
Sbjct: 17 TVSTRLIDAGSTIMQRRLPVKQMNTHVSTFAIYGGDMSRLIGTHHYVHRVNDEFLQCAVY 76
Query: 91 DADDKHARLIGVEYIVSRKIFDSLPAEEQRLWHSHAHEIKAGLWVSPHVPGMLEKAELEK 150
+D A LIG+EY++S +++++L +EQ+LWHSHA+E+K+G W P +P ++ EL+
Sbjct: 77 ASDRSDAPLIGIEYVISDRLYETLSEDEQKLWHSHAYEVKSGSWAYPRLPEVVAAPELKN 136
Query: 151 MAGTFGKFWCTWQVDRGDRLPLGAPALMVSPQDDPAADVRPDLVRNRDDKYRYSTTELRA 210
+A T+GKFWCTWQ+DRGD+LP+GAP LM+SPQ +RP+LV+ RD+KY ST +L+
Sbjct: 137 IAKTYGKFWCTWQIDRGDKLPMGAPELMMSPQGVGQGVLRPELVKRRDEKYNISTDDLKH 196
Query: 211 ARADVAVPAEPRPGQADYWLRHRKGFAVDVVPHEMKCHAPFP 252
RA++A P P ADYW +H K F +D+ EM HA FP
Sbjct: 197 TRAEIAEPEWINP-MADYWKQHGKCFVLDIATVEMNRHAQFP 237
>AT1G05510.1 | chr1:1629527-1630690 FORWARD LENGTH=242
Length = 241
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 30 TTVDSMLLDKGAAMLQALRPVKHIKQHVCTFALYAHDPRRQVETHHFVSRLNQDVLQCAV 89
T + ++D A+ +Q+ P+ I QH+C F YA+D RQVE HHF +N+D+ QC +
Sbjct: 20 TKTGTSMVDTAASAVQSFAPINQIHQHLCAFHFYAYDMTRQVEAHHFCGHINEDMRQCLI 79
Query: 90 YDADDKHARLIGVEYIVSRKIFDSLPAEEQRLWHSHAHEIKAGLWVSPHVPGMLEKAELE 149
YD D +ARLIG+EYIV+ K+F +LP +E++LWH+H E+K G P VP +++ +LE
Sbjct: 80 YDGPDANARLIGLEYIVTEKLFMTLPDDEKKLWHTHEWEVKGGFLFMPGVPEAIQRQDLE 139
Query: 150 KMAGTFGKFWCTWQVDRGDRLPLGAPALMVSPQDDPAADVRPDLVRNRDDKYRYSTTELR 209
K+A T+GK + WQVD G +LP+G P +M++ D + P++++ + ++ S + R
Sbjct: 140 KVAKTYGKVYHFWQVDLGHQLPIGLPNIMMAVTRD--GQLYPEMIKETEKQFGVSIDKER 197
Query: 210 AARADVAVP 218
+RA + P
Sbjct: 198 ESRAYMKGP 206
>AT2G31985.1 | chr2:13614086-13615619 REVERSE LENGTH=242
Length = 241
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 30 TTVDSMLLDKGAAMLQALRPVKHIKQHVCTFALYAHDPRRQVETHHFVSRLNQDVLQCAV 89
T + ++D A+ +Q+ PV I QH+C F YA D RQVE HHF S +N+++ QC +
Sbjct: 20 TKTGTSIIDTAASAVQSFAPVNQIHQHLCAFHFYADDMARQVEAHHFCSHVNEEMRQCLI 79
Query: 90 YDADDKHARLIGVEYIVSRKIFDSLPAEEQRLWHSHAHEIKAGLWVSPHVPGMLEKAELE 149
YD D +ARLIG+EYIVS K+F +LP EE++LWHSH E+K G P VPG +++ +L+
Sbjct: 80 YDGPDANARLIGLEYIVSEKLFMTLPDEEKKLWHSHEWEVKGGFLFMPGVPGAIQRKDLD 139
Query: 150 KMAGTFGKFWCTWQVDRGDRLPLGAPALMVSPQDDPAADVRPDLVRNRDDKYRYSTTELR 209
K+A T+GK + WQVD G LP+G P +M++ D + ++++ + ++ S R
Sbjct: 140 KVAKTYGKVFHFWQVDLGHELPIGLPNVMMAVTRD--GQLFHEMIQEAEKRFGVSVEGER 197
Query: 210 AARADVAVP 218
+RA ++ P
Sbjct: 198 DSRAYMSGP 206
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,282,697
Number of extensions: 216559
Number of successful extensions: 369
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 366
Number of HSP's successfully gapped: 5
Length of query: 252
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 156
Effective length of database: 8,474,633
Effective search space: 1322042748
Effective search space used: 1322042748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)