BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0744400 Os01g0744400|AK067648
         (709 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19950.2  | chr2:8616341-8621219 REVERSE LENGTH=711            546   e-155
AT1G18190.1  | chr1:6257963-6261325 REVERSE LENGTH=669             50   4e-06

>AT2G19950.2 | chr2:8616341-8621219 REVERSE LENGTH=711
          Length = 710

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 299/539 (55%), Positives = 375/539 (69%), Gaps = 26/539 (4%)

Query: 188 PSISNQDAEIVSAVNL--------------------EEKDSAMEV--IHEKNIKEVPDTQ 225
           PS+ +++ E+V + NL                    E  DS +    ++E N+ +    +
Sbjct: 165 PSLPDKEIEVVVSENLMDAPKNGTQRELDDSSKRDVENLDSVVHAPSVNEGNVAQSTGDE 224

Query: 226 VS-GKSQDSKREGLSDSPESTEN---QQEHKLDSGSVKDQDQLEEARGLLKNVVKTGQSK 281
           V  G S + ++E     P ++ N   +Q+ + D+ S+K QDQLEEA+GLLK  V TGQSK
Sbjct: 225 VKVGTSINLEKEQEPKVPVTSTNLKREQDRRADTTSMKIQDQLEEAQGLLKATVSTGQSK 284

Query: 282 EARLARVCAGLSSRLQEYKSENAQLEELLVQEREKCSSYEAHMKQLQQELSMSRVEGSRA 341
           EARLARVCAGLSSRLQE K+ENAQLEELL  E+E   SYEA ++ LQ++LS ++ E ++ 
Sbjct: 285 EARLARVCAGLSSRLQEIKAENAQLEELLTAEQELTKSYEASIRHLQKDLSAAKSEVTKV 344

Query: 342 ESNMVDALTAKNAEIESLVKSLDSWXXXXXXXXXXXXXXQEDMDGLKRNRELTETRVIQA 401
           ES+MV+AL AKN+EIE+LV ++D+               Q DM+ + RNREL ETR++QA
Sbjct: 345 ESSMVEALAAKNSEIETLVSAMDALKNQAALNEGKLSSLQGDMESIMRNRELAETRMMQA 404

Query: 402 LREELATVERRAEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSSSRAME 461
           LREELAT ERRAEEER AHNATKMAA+ERE ELEHRAV+AS AL RIQR AD+ +++  +
Sbjct: 405 LREELATTERRAEEERSAHNATKMAAMERERELEHRAVDASTALVRIQRIADERTAKVAD 464

Query: 462 LEHKVAVLEVECASLQQELQEMEARNRRAQKKPSEEANQVIQMQAWQEEVERARQSQREA 521
            E KVA+LE EC SL QELQ+ME R RR QKK  +EANQVIQ+QAWQ+EV+RARQ QR+A
Sbjct: 465 FEQKVALLEAECTSLNQELQDMEVRARRGQKKAPDEANQVIQIQAWQDEVDRARQGQRDA 524

Query: 522 ETKISSLEAELQKMRVEMAGMKRDAEHYSRQEHVELEKRYRELTDLLYHKQTQLESMASE 581
           E K+S +EAE+QK+RVEMA MKRDAEHYSRQEH ELEKRYRELTDLLY+KQTQLE+MASE
Sbjct: 525 EEKLSLMEAEMQKLRVEMAAMKRDAEHYSRQEHTELEKRYRELTDLLYYKQTQLETMASE 584

Query: 582 KAALEFQLEKSIKQFHEVQMXXXXXXXXXXXXXXXXXDADIKALEPLPLHHRHMATANQQ 641
           KAA EFQLEK +K+ HE Q+                 D++IK LEPLPL+HRHMATA+ Q
Sbjct: 585 KAAAEFQLEKEVKRLHEAQVEVEKSRVSRRASATWEEDSEIKTLEPLPLYHRHMATASTQ 644

Query: 642 LQKAAKLLDSGAVRATRFLWRHPVARVSXXXXXXXXXXXXXXXXHRLQDFASREGPTAM 700
           LQ A KLLDSGAVRATRFLWR+P+AR+                 HRLQ+ A  +   AM
Sbjct: 645 LQNAVKLLDSGAVRATRFLWRYPIARMFLLFYLVFVHLFLMYLIHRLQEQAEAQEVAAM 703



>AT1G18190.1 | chr1:6257963-6261325 REVERSE LENGTH=669
          Length = 668

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 12/256 (4%)

Query: 413 AEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSSSRAMELEHKVAVLEVE 472
           A+ E+  HN T+M  + R   LE    E + +LA  Q+  +    +   L+ +V + E  
Sbjct: 379 ADLEKQKHNNTRMEVLTRLAGLEAENAELTRSLAAGQKKLETQIDQVAVLKQQVELKEST 438

Query: 473 CASLQQELQEMEARNRRAQKKPSEEANQVIQMQAWQEEVERARQSQREAETKISSLEAEL 532
              L++    +  R    ++  +   ++  + Q  + E+          + K + LEA++
Sbjct: 439 LEELKRNTFNIGGRGTTLKQLDTSRGDK-FEHQMLEAEISLLTDKIGRLQDKATKLEADI 497

Query: 533 QKMRVEMAGMKRDAEHYSRQEHVELEKRYRELTDLLYHKQTQLESMASEKAALEFQLEKS 592
           + MR E+       E  +  E +EL++R  +LTD L  KQ+Q+E+++SEKA + F++E  
Sbjct: 498 EMMRKEL-------EEPTEVE-IELKRRLNQLTDHLIQKQSQVEALSSEKATILFRIEAV 549

Query: 593 IKQFHEVQMXXXXXXXXXXXXXXXXXDADIKALEPLPLHHRHMATANQQLQKAAKLLDSG 652
            +   E                    D ++   +  P     + +  + L      L++ 
Sbjct: 550 SRLIEE---NKGMSATEASSQDLEAGDWELSGSKFKPAFQDKIRSGKKHLGWLVMQLNAI 606

Query: 653 AVRATRFLWRHPVARV 668
            +  T FL R+P A++
Sbjct: 607 FISGTVFLRRNPTAKI 622



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.308    0.123    0.320 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,907,110
Number of extensions: 369174
Number of successful extensions: 3086
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 3010
Number of HSP's successfully gapped: 68
Length of query: 709
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 603
Effective length of database: 8,200,473
Effective search space: 4944885219
Effective search space used: 4944885219
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 115 (48.9 bits)