BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0723600 Os01g0723600|AK109735
(409 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10700.1 | chr1:3554157-3556274 FORWARD LENGTH=412 534 e-152
AT2G42910.1 | chr2:17856396-17858394 FORWARD LENGTH=338 482 e-136
AT2G35390.2 | chr2:14895528-14897581 REVERSE LENGTH=404 83 2e-16
AT1G32380.1 | chr1:11682033-11684229 FORWARD LENGTH=401 82 6e-16
AT2G44530.1 | chr2:18383732-18385974 FORWARD LENGTH=395 77 1e-14
>AT1G10700.1 | chr1:3554157-3556274 FORWARD LENGTH=412
Length = 411
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 249/315 (79%), Positives = 281/315 (89%)
Query: 95 AHKNVLLFHCEEMRELAEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFL 154
+ K V LFH +E R+LAE++VA++D IELRSI+W+ F DGFPNLFI NA IRGQHVAFL
Sbjct: 97 SSKRVCLFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFL 156
Query: 155 ASFSSPSVIFEQLSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSN 214
ASFSSP+VIFEQLS+IYALPKLF+SSFTL+LPFFPTGTSERMEDEGDVATAFTLARILSN
Sbjct: 157 ASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSN 216
Query: 215 IPISRGGPSSLVIFDIHALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDD 274
IP SRGGP+SLV FDIHALQERFYFGD++LPCFESGIPLLKSRLQ LPDSDNI+IAFPDD
Sbjct: 217 IPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDD 276
Query: 275 GAWKRFYKQLQHFPMVVCNKVREGEQRIVRIKEGDPRGRHVVIVDDLVQSGGTLIECQKV 334
GAWKRF+KQLQH+P +VCNKVR G++RIVRIKEGD GRHVVIVDDLVQSGGTLIECQKV
Sbjct: 277 GAWKRFHKQLQHYPTIVCNKVRMGDKRIVRIKEGDAEGRHVVIVDDLVQSGGTLIECQKV 336
Query: 335 LAEHGAAKVSAYVTHGIFPNKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQPF 394
LA HGAAK+SAYVTHGIFP SW++F+ D P GLS+FWITDSC +TV V ++ PF
Sbjct: 337 LAAHGAAKISAYVTHGIFPRSSWKRFKLDTKGDPAEGLSYFWITDSCGMTVKEVMNKPPF 396
Query: 395 EILSLAGPIASALQI 409
E+LSLAG IASALQ+
Sbjct: 397 EVLSLAGSIASALQV 411
>AT2G42910.1 | chr2:17856396-17858394 FORWARD LENGTH=338
Length = 337
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 223/313 (71%), Positives = 265/313 (84%), Gaps = 1/313 (0%)
Query: 97 KNVLLFHCEEMRELAEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFLAS 156
K V LF+C E ELA + A +D I L+SI+WR+FADGFPNLFI+NAH IRGQHVAFLAS
Sbjct: 26 KKVHLFYCLECEELARNIAAESDHITLQSINWRSFADGFPNLFINNAHDIRGQHVAFLAS 85
Query: 157 FSSPSVIFEQLSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIP 216
FSSP+VIFEQ+S+IY LP+LF++SFTL+LPFFPTG+ ERME+EGDVATAFT+ARI+SNIP
Sbjct: 86 FSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIVSNIP 145
Query: 217 ISRGGPSSLVIFDIHALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGA 276
ISRGGP+S+VI+DIHALQERFYF D VLP FE+GIPLL RLQ+LP+++ + +AFPDDGA
Sbjct: 146 ISRGGPTSVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVIVAFPDDGA 205
Query: 277 WKRFYKQLQHFPMVVCNKVREGEQRIVRIKEGDPRGRHVVIVDDLVQSGGTLIECQKVLA 336
WKRF+K L H+P VVC KVREG++RIVR+KEG+P G HVVIVDDLVQSGGTLIECQKVLA
Sbjct: 206 WKRFHKLLDHYPTVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLA 265
Query: 337 EHGAAKVSAYVTHGIFPNKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQPFEI 396
HGA KVSAYVTHG+FP SWE+F G ++FWITDSCP TV A+ ++ PFE+
Sbjct: 266 AHGAVKVSAYVTHGVFPKSSWERFT-HKKNGLEEAFAYFWITDSCPQTVKAIGNKAPFEV 324
Query: 397 LSLAGPIASALQI 409
LSLAG IA ALQI
Sbjct: 325 LSLAGSIADALQI 337
>AT2G35390.2 | chr2:14895528-14897581 REVERSE LENGTH=404
Length = 403
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 141/289 (48%), Gaps = 27/289 (9%)
Query: 121 IELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSPSV--IFEQLSIIYALPKLFI 178
++L ++ + FADG +++ ++RG V + +P+ + E L ++ A +
Sbjct: 114 LDLGKVNIKRFADG--EIYVQLQESVRGCDVYLVQPTCTPTNENLMELLIMVDACRRASA 171
Query: 179 SSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIPISRGGPSSLVIFDIHALQERFY 238
T ++P+F ++R + +G + A A++++N+ I+ G ++ D+H+ Q Y
Sbjct: 172 KKVTAVIPYFGYARADR-KTQGRESIA---AKLVANL-ITEAGADRVLACDLHSGQSMGY 226
Query: 239 FGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGAWKR---FYKQLQHFPMVVCNKV 295
F V + + L + +P S+++ + PD G R F K+L P+ + +K
Sbjct: 227 FDIPVDHVYCQPVILDYLASKSIP-SEDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKR 285
Query: 296 REGEQRIVRIKE--GDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKVSAYVTHGIFP 353
R G + + GD RG+ ++VDD++ + GT+++ +L + GA +V A TH +F
Sbjct: 286 RSGHN-VAEVMNLIGDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGAREVYACCTHAVFS 344
Query: 354 NKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQP-FEILSLAG 401
+ E+ G L +T++ P+ A K+ P ILS+A
Sbjct: 345 PPAIERLS-------GGLLQEVIVTNTLPV---AEKNYFPQLTILSVAN 383
>AT1G32380.1 | chr1:11682033-11684229 FORWARD LENGTH=401
Length = 400
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 121 IELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSPSV--IFEQLSIIYALPKLFI 178
+EL +S + FADG +++ ++RG V + +P+ + E L ++ A +
Sbjct: 111 LELGKVSIKRFADG--EIYVQLKESVRGCDVFLVQPTCTPTNENLMELLIMVDACRRASA 168
Query: 179 SSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIPISRGGPSSLVIFDIHALQERFY 238
T ++P+F ++R + +G + A A++++N+ I+ G ++ D+H+ Q Y
Sbjct: 169 KKVTAVIPYFGYARADR-KTQGRESIA---AKLVANL-ITEAGADRVLACDLHSGQSMGY 223
Query: 239 FGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGAWKR---FYKQLQHFPMVVCNKV 295
F V + + +L + S+++ + PD G R F K+L P+ + +K
Sbjct: 224 FDIPVDHVYCQPV-ILDYLASKSISSEDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKR 282
Query: 296 REGEQRIVRIKE--GDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKVSAYVTHGIFP 353
R G + + GD +G+ V+VDD++ + GT+++ +L E GA +V A TH +F
Sbjct: 283 RHG-HNVAEVMNLIGDVKGKVAVMVDDIIDTAGTIVKGAALLHEEGAREVYACCTHAVFS 341
Query: 354 NKSWEKF 360
+ E+
Sbjct: 342 PPAIERL 348
>AT2G44530.1 | chr2:18383732-18385974 FORWARD LENGTH=395
Length = 394
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 122/241 (50%), Gaps = 20/241 (8%)
Query: 121 IELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSPSV---IFEQLSIIYALPKLF 177
++L I + FADG +++ ++RG V FL + P + E L +I A +
Sbjct: 99 LDLGKIKIKRFADG--EIYVQLQESVRGCDV-FLVQPTCPPANENLMELLVMIDACRRAS 155
Query: 178 ISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIPISRGGPSSLVIFDIHALQERF 237
+ T ++P+F ++R + +G + A A++++N+ I++ G ++ D+H+ Q
Sbjct: 156 AKTITAVIPYFGYARADR-KTQGRESIA---AKLVANL-ITQSGADRVLACDLHSGQSMG 210
Query: 238 YFGDSVLPCFESGIPLLKSRL-QELPDSDNITIAFPDDGAWKR---FYKQLQHFPMVVCN 293
YF V + G P++ L + S+++ + PD G R F K+L P+ + +
Sbjct: 211 YFDIPVDHVY--GQPVILDYLASKAISSEDLVVVSPDVGGVARARAFAKKLSDAPLAIVD 268
Query: 294 KVREGEQRIVRIKE--GDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKVSAYVTHGI 351
K R G + + GD +G+ ++VDD++ + GT+ + +L + GA +V A TH +
Sbjct: 269 KRRHGHN-VAEVMNLIGDVKGKVAIMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAV 327
Query: 352 F 352
F
Sbjct: 328 F 328
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,837,456
Number of extensions: 332725
Number of successful extensions: 678
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 677
Number of HSP's successfully gapped: 5
Length of query: 409
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 308
Effective length of database: 8,337,553
Effective search space: 2567966324
Effective search space used: 2567966324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)