BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0722700 Os01g0722700|AK069917
(294 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29130.1 | chr4:14352338-14354865 REVERSE LENGTH=497 326 9e-90
AT2G19860.1 | chr2:8570818-8573762 FORWARD LENGTH=503 311 2e-85
AT1G47840.1 | chr1:17616243-17618859 REVERSE LENGTH=494 245 2e-65
AT3G20040.1 | chr3:6995317-6998064 FORWARD LENGTH=503 237 5e-63
AT1G50460.1 | chr1:18694031-18697429 FORWARD LENGTH=499 232 2e-61
AT4G37840.1 | chr4:17790147-17792198 REVERSE LENGTH=494 130 9e-31
>AT4G29130.1 | chr4:14352338-14354865 REVERSE LENGTH=497
Length = 496
Score = 326 bits (836), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 186/241 (77%)
Query: 42 LLRDLQERCAAPVELLRQVXXXXXXXXXXXXXXXXXSDLQMLVTYVDSLPSGGEKGMFYA 101
+L+ +E CA P+ LRQV S L+ML++YVD+LPSG EKG+FYA
Sbjct: 40 ILKAFEEDCATPISKLRQVADAMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYA 99
Query: 102 LDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEG 161
LDLGGTNFRV+RV LGGK+ R++KQ+ E +SIP HLM+ S ELF+F+A ALAKFVA+E
Sbjct: 100 LDLGGTNFRVMRVLLGGKQERVVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATEC 159
Query: 162 EDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRSQG 221
ED HLPEG QRELGFTFSFPVKQ SL+SG+LIKWTK F+I+E VG+DVV LN A+ G
Sbjct: 160 EDFHLPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVG 219
Query: 222 LDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNM 281
LDM++ ALVNDTVGTLA GRY N D +AAVILGTG+NAAY++ A AIPKWHG LPKSG M
Sbjct: 220 LDMRIAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKSGEM 279
Query: 282 V 282
V
Sbjct: 280 V 280
>AT2G19860.1 | chr2:8570818-8573762 FORWARD LENGTH=503
Length = 502
Score = 311 bits (798), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/242 (62%), Positives = 177/242 (73%)
Query: 42 LLRDLQERCAAPVELLRQVXXXXXXXXXXXXXXXXXSDLQMLVTYVDSLPSGGEKGMFYA 101
+L+ +E CA P+ LRQV S L+ML++YVD+LPSG E G FYA
Sbjct: 40 ILKAFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYA 99
Query: 102 LDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEG 161
LDLGGTNFRV+RV LGGK R++K++ + SIP HLM+ SHELFDF+ LAKFVA+EG
Sbjct: 100 LDLGGTNFRVMRVLLGGKHDRVVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEG 159
Query: 162 EDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRSQG 221
ED HLP G QRELGFTFSFPVKQ SL+SGTLI WTK F+ID+ V KDVV EL A+ G
Sbjct: 160 EDFHLPPGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVG 219
Query: 222 LDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNM 281
LDM V ALVNDT+GTLA GRY N D + AVILGTG+NAAY++ A AIPKWHG LPKSG M
Sbjct: 220 LDMLVAALVNDTIGTLAGGRYTNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 279
Query: 282 VC 283
V
Sbjct: 280 VI 281
>AT1G47840.1 | chr1:17616243-17618859 REVERSE LENGTH=494
Length = 493
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 154/230 (66%), Gaps = 1/230 (0%)
Query: 42 LLRDLQERCAAPVELLRQVXXXXXXXXXXXXXXXXXSDLQMLVTYVDSLPSGGEKGMFYA 101
+L Q+ CA P LR V DL+M++T+VD+LPSG E+G+FYA
Sbjct: 43 ILTKFQKDCATPTPYLRNVANAIADDMRDGLAVEGGGDLEMILTFVDALPSGNEEGLFYA 102
Query: 102 LDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEG 161
LDLGGTNFRV VQLGGK+ R++ +SE ISI Q LM +S ELF F+A LA FVA E
Sbjct: 103 LDLGGTNFRVRSVQLGGKKERVLATESEQISISQKLMIGTSEELFGFIASKLANFVAKEK 162
Query: 162 EDCHL-PEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRSQ 220
L EG +RELGFTFSFPVKQ S+ SGTL KWTK F + M GK+VVA LN A+ +
Sbjct: 163 PGRFLLEEGRKRELGFTFSFPVKQTSIDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEAH 222
Query: 221 GLDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPK 270
GLDM+V+ALVND VGTLA RY + D + VILGTG+NA Y++ AIPK
Sbjct: 223 GLDMRVSALVNDGVGTLAGARYWDEDVMVGVILGTGTNACYVEQKHAIPK 272
>AT3G20040.1 | chr3:6995317-6998064 FORWARD LENGTH=503
Length = 502
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 158/242 (65%)
Query: 42 LLRDLQERCAAPVELLRQVXXXXXXXXXXXXXXXXXSDLQMLVTYVDSLPSGGEKGMFYA 101
LL+DL+E C P+ LRQ+ S L+ML+T+VD LP+G E G +YA
Sbjct: 40 LLKDLEEACETPLGRLRQMVDAIAVEMQAGLVSEGGSKLKMLLTFVDDLPNGSETGTYYA 99
Query: 102 LDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEG 161
L LGG+ FR+++V LGG+ + QD E SIP LM+S+S LFDF+A +L +F+ EG
Sbjct: 100 LHLGGSYFRIIKVHLGGQRSSLEVQDVERHSIPTSLMNSTSEVLFDFLASSLQRFIEKEG 159
Query: 162 EDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRSQG 221
D L + +REL FTFSFPVKQ S++SG LIKWTK FAI EM G+D+ L A+ +G
Sbjct: 160 NDFSLSQPLKRELAFTFSFPVKQTSISSGVLIKWTKGFAISEMAGEDIAECLQGALNKRG 219
Query: 222 LDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNM 281
LD++V ALVNDTVG L+ G + + DTIAAV+ GTGSNA Y++ DAI K SG+M
Sbjct: 220 LDIRVAALVNDTVGALSFGHFHDPDTIAAVVFGTGSNACYLERTDAIIKCQNPRTTSGSM 279
Query: 282 VC 283
V
Sbjct: 280 VV 281
>AT1G50460.1 | chr1:18694031-18697429 FORWARD LENGTH=499
Length = 498
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 157/242 (64%), Gaps = 1/242 (0%)
Query: 42 LLRDLQERCAAPVELLRQVXXXXXXXXXXXXXXXXXSDLQMLVTYVDSLPSGGEKGMFYA 101
+L++L++ C PV LRQV S L+ML+T+VD LP+G EKG +YA
Sbjct: 40 ILKELEDDCDTPVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPTGREKGTYYA 99
Query: 102 LDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEG 161
L LGGT FR+LRV LG + + QD E IP HLM+S+S LF+F+A +L +F+ E
Sbjct: 100 LHLGGTYFRILRVLLGDQRSYLDVQDVERHPIPSHLMNSTSEVLFNFLAFSLERFIEKE- 158
Query: 162 EDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRSQG 221
E+ +G +REL FTFSFPVK S++SG LIKWTK F I EMVG+D+ L A+ +G
Sbjct: 159 ENGSDSQGVRRELAFTFSFPVKHTSISSGVLIKWTKGFEISEMVGQDIAECLQGALNRRG 218
Query: 222 LDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNM 281
LDM V ALVNDTVG L+ G Y + DT+ AV+ GTGSNA Y++ DAI K G L SG+M
Sbjct: 219 LDMHVAALVNDTVGALSLGYYHDPDTVVAVVFGTGSNACYLERTDAIIKCQGLLTTSGSM 278
Query: 282 VC 283
V
Sbjct: 279 VV 280
>AT4G37840.1 | chr4:17790147-17792198 REVERSE LENGTH=494
Length = 493
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 131/247 (53%), Gaps = 13/247 (5%)
Query: 42 LLRDLQERCAAPVELLRQVXXXXXXXXXXXXXXXXXSDLQMLVTYVDSLPSGGEKGMFYA 101
+LR CA PV L V L MLV++ SLPSG EKG+ Y
Sbjct: 41 ILRKFARECATPVSKLWAVADALVADMTASLTAECCGSLNMLVSFTGSLPSGDEKGVHYG 100
Query: 102 LDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVASEG 161
++L G +LR LGG E I I IP +++ S EL DF+++ L KF+A
Sbjct: 101 VNLRGKELLLLRGTLGGNEEPISDVQKHEIPIPDDVLNGSFKELCDFISLELVKFLAMN- 159
Query: 162 EDCHLPEGTQRE---LGFTFSFPVKQKSLASGTLIKWTKSFAI--DEMVGKDVVAELNMA 216
P G E LGFT + V+Q S + I KS A DE V KD+V ++N +
Sbjct: 160 -----PGGEAEEVKNLGFTLTRSVEQIGSHSISSIH-RKSLANDDDEKVLKDLVNDMNES 213
Query: 217 IRSQGLDMKV-TALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSL 275
+ + GL +++ TALV++T+G LA GRY + DT+AAV LG G+NAAYI+ A I +W ++
Sbjct: 214 LETHGLKIRMNTALVDNTIGELAGGRYYHKDTVAAVSLGMGTNAAYIEQAQEISRWKSAI 273
Query: 276 PKSGNMV 282
+ +V
Sbjct: 274 REPQEIV 280
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,086,227
Number of extensions: 194417
Number of successful extensions: 404
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 397
Number of HSP's successfully gapped: 6
Length of query: 294
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 196
Effective length of database: 8,419,801
Effective search space: 1650280996
Effective search space used: 1650280996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)