BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0721900 Os01g0721900|AK121001
         (380 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16830.1  | chr4:9470621-9472308 FORWARD LENGTH=356            103   2e-22
AT4G17520.1  | chr4:9771496-9773313 FORWARD LENGTH=361             99   3e-21
AT5G47210.1  | chr5:19169222-19171012 REVERSE LENGTH=358           91   7e-19

>AT4G16830.1 | chr4:9470621-9472308 FORWARD LENGTH=356
          Length = 355

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 107/222 (48%), Gaps = 9/222 (4%)

Query: 156 DSERPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQETEEALKVEESAPIAEKQ 215
           D ERP RR +ER SGTGRG + KRDG+GRGNWGT  +E +A ETE    VE    + EK 
Sbjct: 143 DGERP-RRAFERRSGTGRGSDFKRDGSGRGNWGTPGEE-IAAETEAVAGVETEKDVGEKP 200

Query: 216 GEQDDAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAEERKVEVDK 275
              D A                                              ERKV+  K
Sbjct: 201 AVDDVA----ADANKEDTVVEEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDT-K 255

Query: 276 DLQSMQPLSTKKGNDEIFIKLGSDKDKKKENAERDERAKKSVSINEFLKPAEXXXXXXXX 335
             +SMQ LS KK NDEIFIKLGSDKDK+K++ E   +AKK+VSINEFLKPAE        
Sbjct: 256 VFESMQQLSNKKSNDEIFIKLGSDKDKRKDDKEE--KAKKAVSINEFLKPAEGGNYYRGG 313

Query: 336 XXXXXXXXXXXXXXXXXXXXXPYSTSAPSIEDQAQFPTLGGK 377
                                  + +AP+I D AQFP+LGGK
Sbjct: 314 RGGRGRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 355



>AT4G17520.1 | chr4:9771496-9773313 FORWARD LENGTH=361
          Length = 360

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 94/176 (53%), Gaps = 15/176 (8%)

Query: 156 DSERPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQETEEALKVEESAPIAEKQ 215
           DSERP R+NY+RHS T  G E KRDGAGR NWGT  D+ +   TEE+  V +     EKQ
Sbjct: 132 DSERP-RKNYDRHSRTAYGNEDKRDGAGRANWGTTQDD-ITPVTEESTAVVDKNLTVEKQ 189

Query: 216 ---GEQDDAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAEERKVE 272
              GE  DA                                           K EERKV+
Sbjct: 190 DGEGEATDA------KNETPAEKAEEKPEDKEMTLEEYEKVLEEKKKALQATKVEERKVD 243

Query: 273 VDKDLQSMQPLSTKKGN-DEIFIKLGSDKDKKKENAERDERAKKSVSINEFLKPAE 327
             K  ++MQ LS+KK N DE+FIKLG++KDK+    ER+E+ +KS+SINEFLKPA+
Sbjct: 244 T-KAFEAMQQLSSKKSNNDEVFIKLGTEKDKRI--TEREEKTRKSLSINEFLKPAD 296



>AT5G47210.1 | chr5:19169222-19171012 REVERSE LENGTH=358
          Length = 357

 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 108/222 (48%), Gaps = 9/222 (4%)

Query: 156 DSERPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQETEEALKVEESAPIAEKQ 215
           D ERPP RNY+RHS TG G  MKR+G GRGNWGT  D+      E   +VE+S P+AEKQ
Sbjct: 143 DVERPP-RNYDRHSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKS-PVAEKQ 200

Query: 216 GEQDDAPTGXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAEERKVEVD 274
           G +D+ P                                           K EERKV+  
Sbjct: 201 GGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQATKVEERKVDT- 259

Query: 275 KDLQSMQPLSTKKGND-EIFIKLGSDKDKKKENAERDERAKKSVSINEFLKPAEXXXXXX 333
           K  +SMQ LS KK  D EIFIKLGSDK+K+K+     E+AKKS+SINEFLKPA+      
Sbjct: 260 KVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDAT---EKAKKSLSINEFLKPADGKRYNG 316

Query: 334 XXXXXXXXXXXXXXXXXXXXXXXPYSTSAPSIEDQAQFPTLG 375
                                      +AP+I D AQFP+LG
Sbjct: 317 RGGGSRGRGGRGGRGEGGNQRYA-KEAAAPAIGDTAQFPSLG 357



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.307    0.128    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,400,240
Number of extensions: 134224
Number of successful extensions: 530
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 523
Number of HSP's successfully gapped: 6
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 112 (47.8 bits)