BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0719100 Os01g0719100|AK062155
(302 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22920.1 | chr5:7665143-7667031 FORWARD LENGTH=292 361 e-100
AT5G25560.2 | chr5:8899486-8901453 FORWARD LENGTH=329 356 1e-98
AT5G18650.1 | chr5:6218260-6220374 FORWARD LENGTH=268 322 2e-88
AT3G62970.1 | chr3:23270636-23272698 FORWARD LENGTH=288 301 2e-82
AT1G74770.1 | chr1:28089695-28094834 REVERSE LENGTH=1260 187 6e-48
AT3G18290.1 | chr3:6274308-6280174 FORWARD LENGTH=1255 184 4e-47
AT1G18910.1 | chr1:6532706-6537993 REVERSE LENGTH=1255 183 1e-46
>AT5G22920.1 | chr5:7665143-7667031 FORWARD LENGTH=292
Length = 291
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 165/253 (65%), Positives = 207/253 (81%), Gaps = 2/253 (0%)
Query: 52 LEEGIMQYGCAHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDAVKRHELPRHEVQQVI 111
+E G YGC+HYRRRC+IRAPCC+EIFDCRHCHNE K+S+ I+ RHELPRHEV +VI
Sbjct: 18 MEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHELPRHEVSKVI 77
Query: 112 CSLCGTEQEVRQVCISCGVCMGKYFCEVCKLFDDDVSKQQYHCNGCGICRIGGKENFFHC 171
CSLC TEQ+V+Q C +CGVCMGKYFC CK FDDD+SK+QYHC+ CGICR GG+ENFFHC
Sbjct: 78 CSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICRTGGEENFFHC 137
Query: 172 SKCGCCYSIVLKNSHACVEGAMHHDCPICFEYLFESTNDVSVLPCGHTIHVKCLREMEEH 231
+C CCYS ++++ H CVEGAMHH+CP+CFEYLF+ST D++VL CGHT+H++C ++M H
Sbjct: 138 KRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGHTMHLECTKDMGLH 197
Query: 232 CQFACPLCSKSVCDMSKAWERLDEELAT--ISDTCDNKMVRILCNDCGATSEVQFHLIAH 289
++ CP+CSKS+CDMS W++LDEE+A + +NKMV ILCNDCG+ + V+FHLIAH
Sbjct: 198 NRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKMVWILCNDCGSNTNVRFHLIAH 257
Query: 290 KCQKCKSYNTRQI 302
KC C SYNTRQ
Sbjct: 258 KCSSCGSYNTRQT 270
>AT5G25560.2 | chr5:8899486-8901453 FORWARD LENGTH=329
Length = 328
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/296 (58%), Positives = 214/296 (72%), Gaps = 18/296 (6%)
Query: 7 QLESTAVQHGQAKINVEEHALVSLLSDEKYATEKTEDVDPDDYEK--LEEGIMQYGCAHY 64
QL+ + + G+ + H++ +E+ + E V + L+ G+M+YGC HY
Sbjct: 12 QLQMSDQEKGEMSRHSHPHSI-----NEESESSTLERVAAESLTNKVLDRGLMEYGCPHY 66
Query: 65 RRRCRIRAPCCNEIFDCRHCHNETKNSIKIDAVKRHELPRHEVQQVICSLCGTEQEVRQV 124
RRRC IRAPCCNEIF C HCH E KN+I +D +RH++PRH+V+QVIC LCGTEQEV Q+
Sbjct: 67 RRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVICLLCGTEQEVGQI 126
Query: 125 CISCGVCMGKYFCEVCKLFDDDVSKQQYHCNGCGICRIGGKENFFHCSKCGCCYSIVLKN 184
CI CGVCMGKYFC+VCKL+DDD SK+QYHC+GCGICRIGG+ENFFHC KCGCCYSI+LKN
Sbjct: 127 CIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHCYKCGCCYSILLKN 186
Query: 185 SHACVEGAMHHDCPICFEYLFESTNDVSVLPCGHTIHVKCLREMEEHCQFACPLCSKSVC 244
H CVEGAMHHDCPICFE+LFES NDV+VLPCGHTIH KCL EM +H Q+ACPLCSKSVC
Sbjct: 187 GHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVC 246
Query: 245 DMSKAWERLDEELAT--ISDTCDNKMVRILCN---------DCGATSEVQFHLIAH 289
DMSK WE+ D E+A + + N+MV L CG + + +I H
Sbjct: 247 DMSKVWEKFDMEIAATPMPEPYQNRMVNSLQRLWEESRGTVPCGGSEMPKLQIIQH 302
>AT5G18650.1 | chr5:6218260-6220374 FORWARD LENGTH=268
Length = 267
Score = 322 bits (824), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 197/262 (75%), Gaps = 5/262 (1%)
Query: 43 DVDPDDYEKLEEGIMQYGCAHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDAVKRHEL 102
+ P+D +L G M +GC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++++ + RH+L
Sbjct: 2 EASPND--RLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR-NIYDRHDL 58
Query: 103 PRHEVQQVICSLCGTEQEVRQVCISCGVCMGKYFCEVCKLFDDDVSKQQYHCNGCGICRI 162
R +V+QVICS+C TEQ QVC +CGV MG+YFC +C +DDD KQQ+HC+ CGICR+
Sbjct: 59 VRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCGICRV 118
Query: 163 GGKENFFHCSKCGCCYSIVLKNSHACVEGAMHHDCPICFEYLFESTNDVSVLPCGHTIHV 222
GG+ENFFHC KCG CY++ L+N+H CVE +M H CPIC+EYLF+S D +V+ CGHT+HV
Sbjct: 119 GGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCGHTMHV 178
Query: 223 KCLREMEEHCQFACPLCSKSVCDMSKAWERLDEELATISDTCD--NKMVRILCNDCGATS 280
+C EM + +F CP+CS+SV DMSK W+RLDEE+ + D +K V ILCNDC T+
Sbjct: 179 ECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDKKVWILCNDCNDTT 238
Query: 281 EVQFHLIAHKCQKCKSYNTRQI 302
EV FH+I KC C+SYNTR I
Sbjct: 239 EVHFHIIGQKCGHCRSYNTRAI 260
>AT3G62970.1 | chr3:23270636-23272698 FORWARD LENGTH=288
Length = 287
Score = 301 bits (772), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 139/276 (50%), Positives = 190/276 (68%), Gaps = 5/276 (1%)
Query: 28 VSLLSDEKYATEKTEDVDPDDYEKLEEGIMQYGCAHYRRRCRIRAPCCNEIFDCRHCHNE 87
SL SD A + P D + G Q+GC HY+RRC+IRAPCCN IF CRHCHN+
Sbjct: 5 ASLQSDSMEAAAAADSSIPRDKDF---GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHND 61
Query: 88 TKNSIKIDAVKRHELPRHEVQQVICSLCGTEQEVRQVCISCGVCMGKYFCEVCKLFDDDV 147
+ NS+ D +RH+L R V+QV+CS+C TEQEV +VC +CGV MG+YFC++CK FDDD+
Sbjct: 62 SANSLP-DPKERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDI 120
Query: 148 SKQQYHCNGCGICRIGGKENFFHCSKCGCCYSIVLKNSHACVEGAMHHDCPICFEYLFES 207
SK+Q+HC+ CGICR+GG++ FFHC CG CY + L++ H+C+E + + CP+C+EYLF+S
Sbjct: 121 SKEQFHCDDCGICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYEYLFDS 180
Query: 208 TNDVSVLPCGHTIHVKCLREMEEHCQFACPLCSKSVCDMSKAWERLDEELATISDTCDNK 267
V+ CGHT+H+ C +M Q+ CP+C+KS+ DMS +W LD E++ + K
Sbjct: 181 VKAAHVMKCGHTMHMDCFEQMINENQYRCPICAKSMVDMSPSWHLLDFEISATEMPVEYK 240
Query: 268 M-VRILCNDCGATSEVQFHLIAHKCQKCKSYNTRQI 302
V ILCNDC S+ FH++ HKC C SYNTR+I
Sbjct: 241 FEVSILCNDCNKGSKAMFHILGHKCSDCGSYNTRRI 276
>AT1G74770.1 | chr1:28089695-28094834 REVERSE LENGTH=1260
Length = 1259
Score = 187 bits (475), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 21/251 (8%)
Query: 59 YGCAHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDAVKRHELPRHEVQQVICSLCGTE 118
+GC HY+R C++ APCC+++F C CH+E + H + R ++ +++C C
Sbjct: 1023 FGCNHYKRNCKLLAPCCDKLFTCIRCHDEEAD---------HSVDRKQITKMMCMKCLLI 1073
Query: 119 QEVRQVC--ISCGVCMGKYFCEVCKLFDDDVSKQQYHCNGCGICRIGGKE--NFFHCSKC 174
Q + C SC MGKYFC++CKL+DD+ ++ YHC C +CR+G ++FHC KC
Sbjct: 1074 QPIGANCSNTSCKSSMGKYFCKICKLYDDE--RKIYHCPYCNLCRVGKGLGIDYFHCMKC 1131
Query: 175 GCCYSIVLKNSHACVEGAMHHDCPICFEYLFESTNDVSVLPCGHTIHVKCLREME-EHCQ 233
C S L H C E + +CPIC EY+F S++ V LPCGH +H C +E H
Sbjct: 1132 NACMSRTLVE-HVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQEYTCSH-- 1188
Query: 234 FACPLCSKSVCDMSKAWERLDEELA--TISDTCDNKMVRILCNDCGATSEVQFHLIAHKC 291
+ CP+CSKS+ DM ++ LD LA + D NK ILCNDCG +H + HKC
Sbjct: 1189 YTCPVCSKSLGDMQVYFKMLDALLAEEKMPDEYSNKTQVILCNDCGRKGNAPYHWLYHKC 1248
Query: 292 QKCKSYNTRQI 302
C SYN+R +
Sbjct: 1249 TTCGSYNSRLL 1259
>AT3G18290.1 | chr3:6274308-6280174 FORWARD LENGTH=1255
Length = 1254
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 141/252 (55%), Gaps = 22/252 (8%)
Query: 59 YGCAHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDAVKRHELPRHEVQQVICSLCGTE 118
YGC HY+R C++RA CC+++F CR CH D V H + R V +++C C
Sbjct: 1004 YGCEHYKRNCKLRAACCDQLFTCRFCH---------DKVSDHSMDRKLVTEMLCMRCLKV 1054
Query: 119 QEVRQVCISC---GVCMGKYFCEVCKLFDDDVSKQQYHCNGCGICRIGGKE--NFFHCSK 173
Q V +C + G M K++C +CKLFDD+ + YHC C +CR+G +FFHC
Sbjct: 1055 QPVGPICTTPSCDGFPMAKHYCSICKLFDDE--RAVYHCPFCNLCRVGEGLGIDFFHCMT 1112
Query: 174 CGCCYSIVLKNSHACVEGAMHHDCPICFEYLFESTNDVSVLPCGHTIHVKCLREME-EHC 232
C CC + L N H C+E ++ +CPIC E+LF S+ V LPCGH +H C + H
Sbjct: 1113 CNCCLGMKLVN-HKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQAYTCSH- 1170
Query: 233 QFACPLCSKSVCDMSKAWERLDEELAT--ISDTCDNKMVRILCNDCGATSEVQFHLIAHK 290
+ CP+C KS+ DM+ + LD LA + + N+ ILCNDC +FH + HK
Sbjct: 1171 -YTCPICGKSLGDMAVYFGMLDALLAAEELPEEYKNRCQDILCNDCERKGTTRFHWLYHK 1229
Query: 291 CQKCKSYNTRQI 302
C C SYNTR I
Sbjct: 1230 CGSCGSYNTRVI 1241
>AT1G18910.1 | chr1:6532706-6537993 REVERSE LENGTH=1255
Length = 1254
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 160/295 (54%), Gaps = 33/295 (11%)
Query: 25 HALVSLLSDEKYATEKTEDVDPDDYEKLEEGI------------MQYGCAHYRRRCRIRA 72
+ + +LL AT++ +++P E + + +GC HY+R C++ A
Sbjct: 972 YIIQNLLMSRWIATQRIYNLEPSILSSNREAVPGQNPSYRDPHKLIFGCKHYKRSCKLLA 1031
Query: 73 PCCNEIFDCRHCHNETKNSIKIDAVKRHELPRHEVQQVICSLCGTEQEV--RQVCISCGV 130
PCCN+++ C CH+E ++D H L R ++ +++C C Q V ISC
Sbjct: 1032 PCCNKLYTCIRCHDE-----EVD----HLLDRKQITKMMCMKCMIIQPVGASCSNISCSS 1082
Query: 131 CMGKYFCEVCKLFDDDVSKQQYHCNGCGICRIGG--KENFFHCSKCGCCYSIVLKNSHAC 188
MGKY+C++CKLFDDD ++ YHC C +CR+G ++FHC KC C S ++ H C
Sbjct: 1083 SMGKYYCKICKLFDDD--REIYHCPYCNLCRLGKGLSIDYFHCMKCNACMSRLIVE-HVC 1139
Query: 189 VEGAMHHDCPICFEYLFESTNDVSVLPCGHTIHVKCLREME-EHCQFACPLCSKSVCDMS 247
E + +CPIC EY+F S + V LPCGH +H C +E H + CP+CSKS+ DM
Sbjct: 1140 REKCLEDNCPICHEYIFTSNSPVKALPCGHVMHSTCFQEYTCSH--YTCPICSKSLGDMQ 1197
Query: 248 KAWERLDEELA--TISDTCDNKMVRILCNDCGATSEVQFHLIAHKCQKCKSYNTR 300
+ LD LA + D N+ ILCNDCG +H + HKC C SYNTR
Sbjct: 1198 VYFRMLDALLAEQKMPDEYLNQTQVILCNDCGRKGNAPYHWLYHKCSSCASYNTR 1252
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.136 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,204,991
Number of extensions: 324602
Number of successful extensions: 1719
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1696
Number of HSP's successfully gapped: 7
Length of query: 302
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 204
Effective length of database: 8,419,801
Effective search space: 1717639404
Effective search space used: 1717639404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)