BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0712700 Os01g0712700|J100034P04
(312 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19570.1 | chr2:8470598-8471503 REVERSE LENGTH=302 207 7e-54
AT4G29610.1 | chr4:14517448-14518329 FORWARD LENGTH=294 180 7e-46
AT4G29600.1 | chr4:14515578-14516501 FORWARD LENGTH=308 169 2e-42
AT4G29620.1 | chr4:14519892-14520905 FORWARD LENGTH=338 151 3e-37
AT4G29570.1 | chr4:14507398-14508279 FORWARD LENGTH=294 142 2e-34
AT4G29630.1 | chr4:14522569-14523240 FORWARD LENGTH=224 137 1e-32
AT4G29640.1 | chr4:14525830-14526870 FORWARD LENGTH=347 120 6e-28
AT4G29650.1 | chr4:14528587-14529342 FORWARD LENGTH=252 110 8e-25
AT4G29580.2 | chr4:14510147-14512186 FORWARD LENGTH=446 106 2e-23
>AT2G19570.1 | chr2:8470598-8471503 REVERSE LENGTH=302
Length = 301
Score = 207 bits (526), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 156/295 (52%), Gaps = 12/295 (4%)
Query: 21 FVMSXXXXXXXXXXXGVETVEDLLPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVN 80
FV+ GV ++ LLP LV A AR PIS+F V VGLG+SGR++ GVN
Sbjct: 6 FVIQSKEAESAAKQLGVSVIQ-LLPSLVKPAQSYARTPISKFNVAVVGLGSSGRIFLGVN 64
Query: 81 LEFRGLPLSHSVHAEQFLVVNAAAAGESELRAVAVSHMPCGHCRQFLQEIRGAGGIRIIV 140
+EF LPL HS+HAEQFLV N GE L AVS PCGHCRQFLQEIR A I+I++
Sbjct: 65 VEFPNLPLHHSIHAEQFLVTNLTLNGERHLNFFAVSAAPCGHCRQFLQEIRDAPEIKILI 124
Query: 141 TSDAEDGCAPE------WRTVASLLPRPFGPHDLLPKHVPLVLEPHDNPL--GEPAAVAN 192
T + + + S LP FGP DLL K PL+LE HDN L + ++ N
Sbjct: 125 TDPNNSADSDSAADSDGFLRLGSFLPHRFGPDDLLGKDHPLLLESHDNHLKISDLDSICN 184
Query: 193 GFAHGDXXXXXXXXXXXXXXXXHAPYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPX 252
G + D +APYS CPSG ++ D +GKVY G +ESAAYNP++GP
Sbjct: 185 G--NTDSSADLKQTALAAANRSYAPYSLCPSGVSLVDCDGKVYRGWYMESAAYNPSMGPV 242
Query: 253 XXXXXXXXXX-XXXXXXXXXXXXXXEKEAGLVSQEATARIFLAAVAPQATFHVYN 306
EKE +V QE TAR+ L ++P+ F V++
Sbjct: 243 QAALVDYVANGGGGGYERIVGAVLVEKEDAVVRQEHTARLLLETISPKCEFKVFH 297
>AT4G29610.1 | chr4:14517448-14518329 FORWARD LENGTH=294
Length = 293
Score = 180 bits (457), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 145/270 (53%), Gaps = 15/270 (5%)
Query: 44 LPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVVNAA 103
LP L+ AM ARAP+S F VGAVGL +SG V+ GVN+EF LPL H++HAEQFLV N A
Sbjct: 21 LPKLIDKAMSLARAPVSTFKVGAVGLTSSGEVFLGVNVEFPNLPLHHTIHAEQFLVTNLA 80
Query: 104 AAGESELRAVAVSHM------PCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRTVAS 157
+L +AVS PCGHCRQF QE+R A I I++ +DG E+ ++ S
Sbjct: 81 LNSMKKLTHIAVSVTGTIFGAPCGHCRQFYQEMRNAPEIEILIKR-PKDG-IDEFMSLKS 138
Query: 158 LLPRPFGPHDLLPKHVPLVLEPHDNP--LGEPAAVANGFAHGDXXXXXXXXXXXXXXXXH 215
L+P FGP +LP+ L+LE DN L +P + + + +
Sbjct: 139 LMPERFGPDSILPEDASLLLEQRDNSLVLSDPEEIC---SDPEDCSHTKCRALAAANKSY 195
Query: 216 APYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPXXXXXXXXXXX-XXXXXXXXXXXX 274
APYS+CPSG A+ G G+VY G +ES AYNP+LGP
Sbjct: 196 APYSKCPSGVALICG-GEVYKGWYIESVAYNPSLGPVEAALVDFVARGGGKEFNEITEVV 254
Query: 275 XXEKEAGLVSQEATARIFLAAVAPQATFHV 304
E + VSQEATAR FL +AP+ F V
Sbjct: 255 LVEMKDVKVSQEATARTFLDKIAPKCDFKV 284
>AT4G29600.1 | chr4:14515578-14516501 FORWARD LENGTH=308
Length = 307
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 138/273 (50%), Gaps = 14/273 (5%)
Query: 44 LPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVVNAA 103
LP L+ AM AR PIS++ VGAVG +SGRVY GVN+EF GLPL HS+H EQFLV N A
Sbjct: 27 LPKLIRKAMSLARGPISKYKVGAVGRASSGRVYLGVNVEFPGLPLHHSIHPEQFLVTNLA 86
Query: 104 AAGESELR--AVAVSH------MPCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRTV 155
E LR AVA+S PCG+CRQFL E I+I++ S E + ++
Sbjct: 87 LNSEKGLRQLAVAISSDCIEFGAPCGNCRQFLMETSNELDIKILLKSKHE--AEGSFSSL 144
Query: 156 ASLLPRPFGPHDLLPKHVPLVLEPHDNPLGEPAAVANGFAHGDXXXXXXXXXXXXXXXXH 215
LLP F P D+LPK PL+LE DN L + D
Sbjct: 145 KLLLPYRFTPDDVLPKGSPLLLEKRDNCLTLSGSTEE-ICSSD-CSHLKCKALAAANNSF 202
Query: 216 APYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPXXXXXXXXXXXXX-XXXXXXXXXX 274
+PY+E PSG A+ D EGK Y G +ES AY+P+LGP
Sbjct: 203 SPYTESPSGVALQDDEGKWYRGWYIESVAYSPSLGPVQAALVDFVARSRGKGFNKIVEAV 262
Query: 275 XXEKEAGLVSQEATARIFLAAV-APQATFHVYN 306
EK VSQE TA++ L + AP F V++
Sbjct: 263 LVEKNNARVSQERTAKMILDTIAAPNCDFKVFH 295
>AT4G29620.1 | chr4:14519892-14520905 FORWARD LENGTH=338
Length = 337
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 44 LPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVVNAA 103
LP L+ AM ARAPIS++ VGAVG +SGRVY GVN++F GLPL HS+HAEQFLV N A
Sbjct: 48 LPNLIRKAMCLARAPISKYKVGAVGRASSGRVYLGVNVDFPGLPLHHSIHAEQFLVTNLA 107
Query: 104 AAGESEL--RAVAVSH------MPCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRTV 155
E +L AVA+S PCG+C QFL E+ A ++I+ E G R
Sbjct: 108 LNYEKDLCKLAVAISTDGLEFGTPCGNCLQFLMEMSNALDMKILSKPKHEAGSFSSLRL- 166
Query: 156 ASLLPRPFGPHDLLPKHVPLVLEPHDNPLGEPAAVANGFAHGDXXXXXXXXXXXXXXXXH 215
LLP ++LPK P +LE N L + G
Sbjct: 167 --LLP------NVLPKGSPFLLEKRYNCLTLSGSA--GEICSLDCSHLKRRALAAANNSF 216
Query: 216 APYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPXXXXXXXXXXXXX-XXXXXXXXXX 274
+PY+E PSG A+ D +G Y G +ES A NP+LGP
Sbjct: 217 SPYTESPSGVALLDNDGNWYRGWYIESVASNPSLGPVQAALVDFVARSRGKMFNKIVQAV 276
Query: 275 XXEKEAGLVSQEATARIFLAAVAPQATFHVY 305
EK VSQE TA+I L +AP F V+
Sbjct: 277 LVEKNNASVSQERTAKIILDTIAPNCDFKVF 307
>AT4G29570.1 | chr4:14507398-14508279 FORWARD LENGTH=294
Length = 293
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 36 GVETVEDLLPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAE 95
G T ++L PL + A+ RA IS PV AVG G+SGR + GVN+E GLPL HS+HAE
Sbjct: 18 GAFTPQNLSPL-INRAIPHTRAQISGSPVVAVGRGSSGRTFFGVNVELPGLPLDHSIHAE 76
Query: 96 QFLVVNAAAAGESELRAVAVS------HMPCGHCRQFLQEIRGAGGIRIIVTSDAEDGCA 149
QFL+ N A E +L +A+S PCGHC Q L +IR +I++T+ G
Sbjct: 77 QFLLANLALHFEQKLECIAISTNGYYFQEPCGHCCQLLHKIRDMSDTKILLTNPT--GQK 134
Query: 150 PEWRTVASLLPRPFGPHDLLPKHVPLVLEPHDN--PLGEPAAVANGFAHGDXXXXXXXXX 207
+ +++ LP+ + +VP +LE + N L + + ++ +
Sbjct: 135 GTYMNLSTFLPQGL----ISQANVPRLLERNFNCIELINHSLYMDICSYSEHCNHLNCRA 190
Query: 208 XXXXXXXHAPYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPXXXXXXXXXXX-XXXX 266
+AP S+CPSG A+ D GKVY+GG +ES A+N +LGP
Sbjct: 191 LKAATISYAPDSKCPSGVALIDHRGKVYSGGYMESVAHNTSLGPVQAALVDFVANGDGQE 250
Query: 267 XXXXXXXXXXEKEAGLVSQEATARIFLAAVA-PQATFHV 304
EK+ G++SQEATAR+ L +A P F V
Sbjct: 251 FKNIVEAVLVEKKCGVLSQEATARMILEKIADPDCIFRV 289
>AT4G29630.1 | chr4:14522569-14523240 FORWARD LENGTH=224
Length = 223
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 44 LPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVVNAA 103
LP L+ AM A APIS++ VGAVG SGR+Y GVN+E GLPL HS+HAEQFLV N A
Sbjct: 26 LPNLIGKAMSLALAPISKYKVGAVGRARSGRIYLGVNVELPGLPLHHSIHAEQFLVTNLA 85
Query: 104 AAGESELRAVAVS--------HMPCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRTV 155
E L +AV+ PCG+CRQFL EI A I+I++ S E ++++
Sbjct: 86 LNSEKGLHLLAVTISTDGNDFGAPCGNCRQFLMEISKALNIKILLKSKYE--AEGSFKSL 143
Query: 156 ASLLPRPFGPHDLLPKHVPLVLEPHDNPLGEPAAVANGFAHGDXXXXXXXXXXXXXXXXH 215
LLP F P D+LPK PL+LE N L + A D
Sbjct: 144 RLLLPDRFSPDDVLPKGSPLLLEKRHNCLSLSGS-AEEICSSD-CSHLKCKALAAANNSF 201
Query: 216 APYSECPSGFAVADGEGKVYAG 237
+PY+ PSG A+ D +G Y G
Sbjct: 202 SPYTNSPSGVALQDDDGNWYRG 223
>AT4G29640.1 | chr4:14525830-14526870 FORWARD LENGTH=347
Length = 346
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 127/275 (46%), Gaps = 19/275 (6%)
Query: 44 LPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVVNAA 103
LP L+ A +AP VGAVG +SGR Y GVN+EF+GL S+HAEQFL+ N A
Sbjct: 25 LPKLIRKARNLVKAPSK---VGAVGRASSGRFYLGVNVEFKGLLPHFSIHAEQFLIANLA 81
Query: 104 AAGESELRAVAVS------HMPCGHCRQFLQEIRGAGGIRIIV-TSDAEDGCAPEWRTVA 156
E +L +AVS PC C +FL+EI A I I++ + DG ++++
Sbjct: 82 LNSEPKLTHLAVSDNGTVFQDPCYDCTRFLKEINNAHQIEILIKNAHGRDG---SFKSLE 138
Query: 157 SLLPRPFGPHDLLPKHVPLVLEPHDNPLG---EPAAVANGFAHGDXXXXXXXXXXXXXXX 213
S +P FG +L L+L DN L E +A ++ D
Sbjct: 139 SHMPDEFGSESILSAEPSLLLMERDNCLALIDEDSAAGGISSNADLCSFLKLEALKAANK 198
Query: 214 XHAPYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPXXXXXXXXXXX-XXXXXXXXXX 272
+APY +CPSG A+ EG+VYAG +E+ +LGP
Sbjct: 199 SYAPYRKCPSGVALF-CEGEVYAGWYIETVDRTISLGPVQAALVDFIARGEGKGFDKITG 257
Query: 273 XXXXEKEAGLVSQEATARIFLAAV-APQATFHVYN 306
EK+ V QE TAR L + AP F V++
Sbjct: 258 AVLVEKKDAKVGQEDTARKLLEKIAAPNCDFKVFH 292
>AT4G29650.1 | chr4:14528587-14529342 FORWARD LENGTH=252
Length = 251
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 115/273 (42%), Gaps = 50/273 (18%)
Query: 36 GVETVEDLLPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAE 95
GV DL+ L AM ARAPIS +GL +S R++ GVN+EF GLPL HS+ AE
Sbjct: 18 GVSRPSDLVKL-EEEAMILARAPISGVQDAVLGLASSDRIFLGVNVEFEGLPLHHSISAE 76
Query: 96 QFLVVNAAAAGESELRAVAVSHMPCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRTV 155
QFLV N A E EL A + R + S ED
Sbjct: 77 QFLVANLALNFEQELHACLIPS-------------------RFYLESFEED--------- 108
Query: 156 ASLLPRPFGPHDLLPKHVPLVLEPHDNPL--GEPAAVANGFAHGDXXXXXXXXXXXXXXX 213
VPL+L P +N L +P + A ++ +
Sbjct: 109 -----------------VPLLLVPQNNRLAHSDPFSAAEICSNPEHCSHLKCRALTAANK 151
Query: 214 XHAPYSECPSGFAVADGEGKVYAGGCLESAAYNPTLGPXXXXXXXXXXX-XXXXXXXXXX 272
+A YS+CPSG A+ EG+VY G C+ESAAYN +LGP
Sbjct: 152 SNAQYSKCPSGVALI-CEGEVYGGWCIESAAYNLSLGPVQAALVDFMARGEGKGFEMITG 210
Query: 273 XXXXEKEAGLVSQEATARIFLAAVAPQATFHVY 305
E VSQEATARI L +AP F V+
Sbjct: 211 AVLVEMNDAKVSQEATARILLKTIAPGCNFSVF 243
>AT4G29580.2 | chr4:14510147-14512186 FORWARD LENGTH=446
Length = 445
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 116/221 (52%), Gaps = 18/221 (8%)
Query: 41 EDLLPLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVV 100
E LLPL + A+ A+A S+ P+ AVG G+SGR + GVN+E GL HS+HA QFLVV
Sbjct: 25 ETLLPL-INRALPLAQALPSQSPLVAVGRGSSGRTFLGVNVELPGLSPLHSIHAGQFLVV 83
Query: 101 NAAAAGESELRAVAVSHM------PCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRT 154
+ A E L +A S PC HC Q LQEIR A ++++T D +
Sbjct: 84 HLALNNERTLNCLAFSSNGSYFDPPCPHCCQLLQEIRNASSTKLLIT----DPSRQRDMS 139
Query: 155 VASLLPRPF-GPHDLLPKHV--PLVLEPHDN--PLGEPAAVANGFAHGDXXXXXXXXXXX 209
+++ LP+ + ++ +PK+ L+ E +N L P + + +
Sbjct: 140 LSTYLPQKYLSLYNEVPKYFFARLLDENRNNGLTLINPNPIRDCL-DSEICNHLSCRALK 198
Query: 210 XXXXXHAPYSECPSGFAVADGEGKVYAGGCLESAAYNPTLG 250
+APYS+ PSG A+ D +G+VY+G +ES A NP LG
Sbjct: 199 AANRSYAPYSKSPSGVALMDFQGRVYSGWSIESVA-NPILG 238
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,693,820
Number of extensions: 202378
Number of successful extensions: 442
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 415
Number of HSP's successfully gapped: 12
Length of query: 312
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 214
Effective length of database: 8,419,801
Effective search space: 1801837414
Effective search space used: 1801837414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)