BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0711400 Os01g0711400|AY346327
(1033 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26080.1 | chr2:11109330-11113786 REVERSE LENGTH=1045 1642 0.0
AT4G33010.1 | chr4:15926852-15931150 REVERSE LENGTH=1038 1633 0.0
>AT2G26080.1 | chr2:11109330-11113786 REVERSE LENGTH=1045
Length = 1044
Score = 1642 bits (4251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/1004 (78%), Positives = 840/1004 (83%), Gaps = 4/1004 (0%)
Query: 23 TTSPAPSR---GISTLXXXXXXXXXXXXXXXXXHQYTTGRPVSASALQPSDTFPRRHNSA 79
TT+ PSR +S+ +Q+ T R +S AL+PSDTFPRRHNSA
Sbjct: 33 TTTVTPSRYVSSVSSFLHRRRDVSGSAFTTSGRNQHQT-RSISVDALKPSDTFPRRHNSA 91
Query: 80 TPAEQAAMASECGFNTLDALIDATVPAAIRAPTMHFSGKFDAGFTESQMIDHMQRLAAMN 139
TP EQA MA+ CGF+ L+ LID+TVP +IR +M FSG FD G TESQMI+HM LA+ N
Sbjct: 92 TPDEQAQMANYCGFDNLNTLIDSTVPKSIRLDSMKFSGIFDEGLTESQMIEHMSDLASKN 151
Query: 140 KAYKSFIGMGYYNTHVPAVILRNLMENPAWYTQYTPYQAEIAQGRLESLLNYQTMVADLT 199
K +KSFIGMGYYNTHVP VILRN+MENPAWYTQYTPYQAEI+QGRLESLLNYQT++ DLT
Sbjct: 152 KVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTVITDLT 211
Query: 200 GLPMSNASLLDXXXXXXXXXXXCNGILKSKKKTFLIASNCHPQTIDVCQTRAAGFDLNVI 259
GLPMSNASLLD CN ILK KKKTF+IASNCHPQTIDVC+TRA GFDL V+
Sbjct: 212 GLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFVIASNCHPQTIDVCKTRADGFDLKVV 271
Query: 260 VADAKDFDYSSGDVCGVLVQYPGTEGEVLDYAEFVKDAHAHGVKVVMATDLLALTSLRPP 319
D KD DYSSGDVCGVLVQYPGTEGEVLDY EFVK+AHA+GVKVVMATDLLALT L+PP
Sbjct: 272 TVDIKDVDYSSGDVCGVLVQYPGTEGEVLDYGEFVKNAHANGVKVVMATDLLALTMLKPP 331
Query: 320 GEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAM 379
GE GADI VGS QRFGVPMGYGGPHAAFLATSQEYKR+MPGRIIGVSVDSSGK ALRMAM
Sbjct: 332 GEFGADIVVGSGQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKQALRMAM 391
Query: 380 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIADRVHGLAGTFAHGLKKL 439
QTREQHIRRDKATSNICTAQALLANM AMYAVYHGPEGLK+IA RVHGLAG FA GLKKL
Sbjct: 392 QTREQHIRRDKATSNICTAQALLANMTAMYAVYHGPEGLKSIAQRVHGLAGVFALGLKKL 451
Query: 440 GTVTVQELPFFDTVKVKVADANAIAQEACKNEMNLRVVDATTITVAFDETTTLEDVDKLF 499
GT VQ+LPFFDTVKV +DA AI A K E+NLR+VD+ TITVAFDETTTL+DVDKLF
Sbjct: 452 GTAQVQDLPFFDTVKVTCSDATAIFDVAAKKEINLRLVDSNTITVAFDETTTLDDVDKLF 511
Query: 500 KVFNGGKPVNFTXXXXXXXXXXXXXXXXXXXXXYLTHPIFNMYHTEHELLRYLHKLQSKD 559
+VF GKPV FT YLTHPIFNMYHTEHELLRY+HKLQ+KD
Sbjct: 512 EVFASGKPVQFTAESLAPEFNNAIPSSLTRESPYLTHPIFNMYHTEHELLRYIHKLQNKD 571
Query: 560 LSLCHSMIPLGSCTMKLNATVEMMPVTYPSFANMHPFAPTEQAAGYHEMFDDLGDLLCKI 619
LSLCHSMIPLGSCTMKLNAT EMMPVT+PSF NMHPFAP EQA GY EMF +LG+LLC I
Sbjct: 572 LSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTNMHPFAPVEQAQGYQEMFTNLGELLCTI 631
Query: 620 TGFDSFSLQPNAGASGEYAGLMVIRAYHRARGDYHRDVCIIPVSAHGTNPASAAMCGMKI 679
TGFDSFSLQPNAGA+GEYAGLMVIRAYH +RGD+HR+VCIIPVSAHGTNPASAAMCGMKI
Sbjct: 632 TGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAAMCGMKI 691
Query: 680 VAVGTDSKGNINIEELRKAAEANKDNLAALMVTYPSTHGVYEEGIDEICRIIHENGGQVY 739
VAVGTD+KGNINIEELR AAEANKDNLAALMVTYPSTHGVYEEGIDEIC IIHENGGQVY
Sbjct: 692 VAVGTDAKGNINIEELRNAAEANKDNLAALMVTYPSTHGVYEEGIDEICNIIHENGGQVY 751
Query: 740 MDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPV 799
MDGANMNAQVGLTSPGFIGADVCHLNLHKTFCI VK+HLAPFLPSHPV
Sbjct: 752 MDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPFLPSHPV 811
Query: 800 ITTGGFPLPEKTDPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAK 859
I TGG P PE+T PLGTISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAK
Sbjct: 812 IPTGGIPEPEQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAK 871
Query: 860 RLEKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRLMDYGFHAPTMSWPVPGT 919
RLE HYPVLFRGVNGTVAHEFIIDLRGFK TAGIEPEDVAKRLMDYGFH PTMSWPVPGT
Sbjct: 872 RLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 931
Query: 920 LMIEPTESESKAELDRFCDALXXXXXXXXXXXXGKADVNNNVLKSAPHPPQLLMSDSWTK 979
LMIEPTESESKAELDRFCDAL G AD NNNVLK APHPP LLM+D+W K
Sbjct: 932 LMIEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNVLKGAPHPPSLLMADTWKK 991
Query: 980 PYSREYAAFPAAWLRGAKFWPTTCRVDNVYGDRNLICTLQQGSQ 1023
PYSREYAAFPA WLR +KFWPTT RVDNVYGDRNL+CTLQ ++
Sbjct: 992 PYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQPANE 1035
>AT4G33010.1 | chr4:15926852-15931150 REVERSE LENGTH=1038
Length = 1037
Score = 1633 bits (4228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/966 (80%), Positives = 830/966 (85%), Gaps = 3/966 (0%)
Query: 53 HQYTTGRPVSASALQPSDTFPRRHNSATPAEQAAMASECGFNTLDALIDATVPAAIRAPT 112
HQ T R +S A++PSDTFPRRHNSATP EQ MA CGF+ +D+LIDATVP +IR +
Sbjct: 62 HQQT--RSISVDAVKPSDTFPRRHNSATPDEQTHMAKFCGFDHIDSLIDATVPKSIRLDS 119
Query: 113 MHFSGKFDAGFTESQMIDHMQRLAAMNKAYKSFIGMGYYNTHVPAVILRNLMENPAWYTQ 172
M FS KFDAG TESQMI HM LA+ NK +KSFIGMGYYNTHVP VILRN+MENPAWYTQ
Sbjct: 120 MKFS-KFDAGLTESQMIQHMVDLASKNKVFKSFIGMGYYNTHVPTVILRNIMENPAWYTQ 178
Query: 173 YTPYQAEIAQGRLESLLNYQTMVADLTGLPMSNASLLDXXXXXXXXXXXCNGILKSKKKT 232
YTPYQAEI+QGRLESLLN+QT++ DLTGLPMSNASLLD CN ILK KKKT
Sbjct: 179 YTPYQAEISQGRLESLLNFQTVITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKT 238
Query: 233 FLIASNCHPQTIDVCQTRAAGFDLNVIVADAKDFDYSSGDVCGVLVQYPGTEGEVLDYAE 292
F+IASNCHPQTIDVC+TRA GFDL V+ +D KD DYSSGDVCGVLVQYPGTEGEVLDYAE
Sbjct: 239 FVIASNCHPQTIDVCKTRADGFDLKVVTSDLKDIDYSSGDVCGVLVQYPGTEGEVLDYAE 298
Query: 293 FVKDAHAHGVKVVMATDLLALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQ 352
FVK+AHA+GVKVVMATDLLALT L+PPGE GADI VGSAQRFGVPMGYGGPHAAFLATSQ
Sbjct: 299 FVKNAHANGVKVVMATDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQ 358
Query: 353 EYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 412
EYKR+MPGRIIG+SVDSSGK ALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY
Sbjct: 359 EYKRMMPGRIIGISVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 418
Query: 413 HGPEGLKAIADRVHGLAGTFAHGLKKLGTVTVQELPFFDTVKVKVADANAIAQEACKNEM 472
HGP GLK+IA RVHGLAG F+ GL KLG VQELPFFDTVK+K +DA+AIA A K+E+
Sbjct: 419 HGPAGLKSIAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIKCSDAHAIADAASKSEI 478
Query: 473 NLRVVDATTITVAFDETTTLEDVDKLFKVFNGGKPVNFTXXXXXXXXXXXXXXXXXXXXX 532
NLRVVD+TTIT +FDETTTL+DVDKLFKVF GKPV FT
Sbjct: 479 NLRVVDSTTITASFDETTTLDDVDKLFKVFASGKPVPFTAESLAPEVQNSIPSSLTRESP 538
Query: 533 YLTHPIFNMYHTEHELLRYLHKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTYPSFAN 592
YLTHPIFNMYHTEHELLRY+HKLQSKDLSLCHSMIPLGSCTMKLNAT EMMPVT+PSF +
Sbjct: 539 YLTHPIFNMYHTEHELLRYIHKLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTD 598
Query: 593 MHPFAPTEQAAGYHEMFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAYHRARGD 652
+HPFAP EQA GY EMF++LGDLLC ITGFDSFSLQPNAGA+GEYAGLMVIRAYH +RGD
Sbjct: 599 IHPFAPVEQAQGYQEMFENLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGD 658
Query: 653 YHRDVCIIPVSAHGTNPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNLAALMVT 712
+HR+VCIIPVSAHGTNPASAAMCGMKI+ VGTD+KGNINIEE+RKAAEANKDNLAALMVT
Sbjct: 659 HHRNVCIIPVSAHGTNPASAAMCGMKIITVGTDAKGNINIEEVRKAAEANKDNLAALMVT 718
Query: 713 YPSTHGVYEEGIDEICRIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCI 772
YPSTHGVYEEGIDEIC IIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCI
Sbjct: 719 YPSTHGVYEEGIDEICNIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCI 778
Query: 773 XXXXXXXXXXXXXVKKHLAPFLPSHPVITTGGFPLPEKTDPLGTISAAPWGSALILPISY 832
VK HLAPFLPSHPVI TGG P PEKT PLG ISAAPWGSALILPISY
Sbjct: 779 PHGGGGPGMGPIGVKNHLAPFLPSHPVIPTGGIPQPEKTAPLGAISAAPWGSALILPISY 838
Query: 833 TYIAMMGSKGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKTTAG 892
TYIAMMGS GLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFK TAG
Sbjct: 839 TYIAMMGSGGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAG 898
Query: 893 IEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALXXXXXXXXXXXX 952
IEPEDVAKRLMDYGFH PTMSWPVPGTLMIEPTESESKAELDRFCDAL
Sbjct: 899 IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEK 958
Query: 953 GKADVNNNVLKSAPHPPQLLMSDSWTKPYSREYAAFPAAWLRGAKFWPTTCRVDNVYGDR 1012
G ADV NNVLK APHPP LLM+D+W KPYSREYAAFPA WLR +KFWPTT RVDNVYGDR
Sbjct: 959 GNADVQNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDR 1018
Query: 1013 NLICTL 1018
L+CTL
Sbjct: 1019 KLVCTL 1024
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,965,425
Number of extensions: 793881
Number of successful extensions: 1594
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1591
Number of HSP's successfully gapped: 2
Length of query: 1033
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 924
Effective length of database: 8,118,225
Effective search space: 7501239900
Effective search space used: 7501239900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)