BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0706400 Os01g0706400|AK066981
(1101 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19710.1 | chr2:8506339-8509817 FORWARD LENGTH=938 283 3e-76
AT4G29440.1 | chr4:14473942-14477721 REVERSE LENGTH=1091 271 2e-72
AT1G34220.1 | chr1:12463102-12465911 REVERSE LENGTH=650 240 4e-63
AT4G35730.1 | chr4:16931111-16933241 FORWARD LENGTH=467 221 2e-57
AT1G25420.1 | chr1:8916141-8917980 FORWARD LENGTH=324 208 1e-53
AT1G13340.1 | chr1:4569622-4571043 REVERSE LENGTH=410 119 1e-26
AT1G79910.1 | chr1:30055050-30057011 FORWARD LENGTH=382 108 2e-23
AT4G32350.1 | chr4:15617634-15620642 FORWARD LENGTH=733 105 2e-22
AT2G14830.1 | chr2:6362524-6365818 FORWARD LENGTH=455 105 2e-22
AT1G52315.1 | chr1:19481212-19482674 FORWARD LENGTH=348 92 1e-18
AT1G51900.1 | chr1:19279884-19282895 REVERSE LENGTH=775 69 2e-11
AT3G15490.1 | chr3:5229785-5230646 FORWARD LENGTH=212 56 9e-08
>AT2G19710.1 | chr2:8506339-8509817 FORWARD LENGTH=938
Length = 937
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/262 (52%), Positives = 191/262 (72%), Gaps = 1/262 (0%)
Query: 8 LSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 67
+ VL +GFKP KCKTAL+MA +R+K+L+N+KE+Q++Q+RRE+AQLLE+ Q TARIRVE
Sbjct: 1 MKKVLQRGFKPAKCKTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVE 60
Query: 68 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 127
HV+REEK + AY+LI +YCEL+V R+ +I+SQK CPIDLKEA+ SV+FAS R SDV EL+
Sbjct: 61 HVVREEKTVAAYELIGIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELS 120
Query: 128 DVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKW 187
++ K FT+KYGK+F+ +A+E+RPDSGVSRL++EKLSA APD TK+K L +IAEEHN+ W
Sbjct: 121 EIFKQFTTKYGKDFSTSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEHNVVW 180
Query: 188 EPKAFEEKLPKQNDDLLHVTSTYPGGNIPTRGSSASNSGMPTSQPA-APSHSYMESSNSH 246
E ++F E PK + L S P ++ S SN P + A A +++ SS H
Sbjct: 181 EAQSFVESDPKDTELLNGANSFQPASSMNMDSSINSNKEQPPNIHAPATVNAHHGSSERH 240
Query: 247 MSTAHSYSSAEVPDNRAPYVTA 268
S +SY++ +R+ VT+
Sbjct: 241 HSPENSYANGGRSSSRSNNVTS 262
>AT4G29440.1 | chr4:14473942-14477721 REVERSE LENGTH=1091
Length = 1090
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 170/229 (74%), Gaps = 2/229 (0%)
Query: 8 LSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 67
+ VLH+ FKP KCK AL+MA +R+K+L+N+K+ Q++Q+RRE+A LLE+ Q QTA+IRVE
Sbjct: 1 MKKVLHRSFKPAKCKIALQMAASRLKILKNKKDTQIKQLRRELAHLLESGQTQTAKIRVE 60
Query: 68 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 127
HV+REEK + AY+L+ +YCEL+VAR+ +IDSQKTCP DLKEA+ASV++AS R +DV EL+
Sbjct: 61 HVVREEKTVAAYELVGIYCELLVARLGVIDSQKTCPNDLKEAVASVLYASQRLTDVGELS 120
Query: 128 DVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKW 187
D+ KHF++KYGK+F +AA+ ++PDSGVSRL++EKLS APD TKIK LT IA +HN+ W
Sbjct: 121 DIVKHFSAKYGKDFVSAAIGLQPDSGVSRLLVEKLSVKAPDGPTKIKILTEIATQHNVTW 180
Query: 188 EPKAFEEKLPKQN--DDLLHVTSTYPGGNIPTRGSSASNSGMPTSQPAA 234
E ++ E PK+ + + P I + S N+ P Q AA
Sbjct: 181 EAESLVESDPKETMSASGASSSVSQPATGIKSESSRIQNNQPPVFQAAA 229
>AT1G34220.1 | chr1:12463102-12465911 REVERSE LENGTH=650
Length = 649
Score = 240 bits (612), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 155/237 (65%), Gaps = 30/237 (12%)
Query: 8 LSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 67
L +KGFK KCKT L++ + RIKL+RNR+E Q++QMRRE+A+LLE Q+ TARIRVE
Sbjct: 4 LDSFFNKGFKAAKCKTLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVE 63
Query: 68 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 127
H+IREEK M A +++E++CEL+ R+ II++Q+ CP+DLKEAI+SV FA+ RCSD+TEL
Sbjct: 64 HIIREEKMMAAQEILELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQ 123
Query: 128 DVRKHFTSKYGKEFAAAALEVRPDSGVSR------------------------------L 157
V+ F SKYGKEF AAA E++PDSGV+R
Sbjct: 124 QVQILFVSKYGKEFVAAASELKPDSGVNRKTESLIFIAWFSLVETRDLFMFLYFSNSILQ 183
Query: 158 VIEKLSAGAPDTQTKIKTLTSIAEEHNIKWEPKAFEEKLPKQNDDLLHVTSTYPGGN 214
++E LS AP +TK+K L IAEEH + W+P + E L K ++DLL + GG+
Sbjct: 184 LVELLSVRAPSPETKLKLLKEIAEEHELDWDPASTETDLFKSHEDLLDGPKQFGGGS 240
>AT4G35730.1 | chr4:16931111-16933241 FORWARD LENGTH=467
Length = 466
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 142/192 (73%)
Query: 11 VLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVEHVI 70
+ +GF KCKTA +MA+ARIKL+RN++ V V+QMRR++A LL++ QD TARIRVEHVI
Sbjct: 21 LFRRGFNSSKCKTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVI 80
Query: 71 REEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELADVR 130
RE+ A ++IE++CEL+V+R++II QK CP+DLKE IAS+IFA+ RCS++ EL D+R
Sbjct: 81 REQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLR 140
Query: 131 KHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKWEPK 190
F KYGK+F +AA ++RP GV+R++I+KLS P + K+K + IA+E + W+
Sbjct: 141 DIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDTT 200
Query: 191 AFEEKLPKQNDD 202
E++L K ++
Sbjct: 201 ETEQELLKPQEE 212
>AT1G25420.1 | chr1:8916141-8917980 FORWARD LENGTH=324
Length = 323
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 146/197 (74%)
Query: 8 LSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 67
L+ + ++G KCKT+L +A+AR+KLL+N++++Q++ M++E+A L+A Q+ ARIRVE
Sbjct: 4 LNQLFNRGIFGAKCKTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVE 63
Query: 68 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 127
HVIRE AY+++E++CE ++AR+ I++S+K CP +L+EAIAS+IFA+ RCS+V +L
Sbjct: 64 HVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLL 123
Query: 128 DVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKW 187
++ F +KYGKEF A E+RPDSGV+R +IEKLS +P ++K L IA+E+++ W
Sbjct: 124 QIKNLFGTKYGKEFIMVASELRPDSGVNRTIIEKLSPTSPSGAARLKMLKEIAQEYSLNW 183
Query: 188 EPKAFEEKLPKQNDDLL 204
+ A E + K ++DLL
Sbjct: 184 DSSATEAEFMKSHEDLL 200
>AT1G13340.1 | chr1:4569622-4571043 REVERSE LENGTH=410
Length = 409
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 108/179 (60%)
Query: 7 KLSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRV 66
KL +L + FK +K K+ + +AL R+ +L+N+++ ++ Q +V +LL+ Q + A RV
Sbjct: 4 KLDALLGRSFKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAYHRV 63
Query: 67 EHVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTEL 126
+ V++++ + I Y L + R+ + + + CP +L EA++ ++FA+ R + EL
Sbjct: 64 DQVVKDQNTLDVLFFIHGYFTLCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEFPEL 123
Query: 127 ADVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNI 185
++R S++GK+ AA ++E+R + GV +I+KLS P + ++K L IA E+NI
Sbjct: 124 QEIRNVLISRFGKDLAARSIELRSNCGVDPKIIQKLSTRPPPKEVRMKALKEIAAENNI 182
>AT1G79910.1 | chr1:30055050-30057011 FORWARD LENGTH=382
Length = 381
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 101/184 (54%), Gaps = 12/184 (6%)
Query: 16 FKPD---KCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVEHVIRE 72
FKP KCK+ +++ R+ ++ +K + ++ ++ LL+ D A R E +I E
Sbjct: 6 FKPKFYTKCKSLVKITKTRVDTVKRKKNSVCKYLKNDIVDLLKNSLDYNAYGRAEGLIEE 65
Query: 73 EKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELADVRKH 132
++ + Y+ +E +C + + +S++ CP + +EAI+S+++A+ R S+V EL D+R
Sbjct: 66 KRRLACYEFLEQFCNCVASNVSLLQKSIRCPDECREAISSLVYAAARVSEVPELRDLRSL 125
Query: 133 FTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKWEPKAF 192
F +YG D V+ +E+ A P + K++ L IA E++IKW+ K+
Sbjct: 126 FAERYGNTL---------DQFVNPEFVERFKAEPPSKEMKVELLQEIAREYSIKWDAKSL 176
Query: 193 EEKL 196
E++L
Sbjct: 177 EQRL 180
>AT4G32350.1 | chr4:15617634-15620642 FORWARD LENGTH=733
Length = 732
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 8 LSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 67
G L +GF P K K +++ RI +LR ++ ++ ++R++A L+ D A R
Sbjct: 2 FDGFLGRGFAP-KGKPLIKLTKNRIDVLRRKRNATIKFLKRDLADLIINGHDYNAFSRAG 60
Query: 68 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 127
++ E +++ + D +E C+ + ++S + CP D +EAI+S++FA+ S++ EL
Sbjct: 61 GLLDELRYLWSLDFVEQTCDFVYKQLSTMQKTPECPEDCREAISSLMFAASGFSELPELR 120
Query: 128 DVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKW 187
++R+ F KY A V++ ++E +S+ + K+K + +A E +I+W
Sbjct: 121 ELRQMFHEKYTDSLALF---------VNQELVENMSSKPFSMEKKVKLMEDVALEFSIRW 171
Query: 188 EPKAFEEKLPKQN 200
+ K FE+++ +QN
Sbjct: 172 DSKDFEKRIVRQN 184
>AT2G14830.1 | chr2:6362524-6365818 FORWARD LENGTH=455
Length = 454
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%)
Query: 20 KCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVEHVIREEKFMQAY 79
KCK+ ++ R+ LL+N+K +R ++AQLL + A R + + +E M Y
Sbjct: 83 KCKSVVKQLQCRLNLLKNKKYAISSHLRNDIAQLLRIGERDRALHRAQQLFLDENLMSLY 142
Query: 80 DLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELADVRKHFTSKYGK 139
L+ + ++++ +S I ++ P + EA+++++FAS RC D+ EL +R F +YG
Sbjct: 143 HLLLHFSDIILLNLSYIRRRRDLPDGINEAVSTLVFASARCGDLPELRALRVLFGKRYGN 202
Query: 140 EFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKWEPKAFE 193
F AL + P + V+ VIEKLS + K K L I EE+N++ E A E
Sbjct: 203 HFVDTALNLLPGNCVNPQVIEKLSIISVSDDAKSKLLGEIVEEYNLRLEVLAIE 256
>AT1G52315.1 | chr1:19481212-19482674 FORWARD LENGTH=348
Length = 347
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 11 VLHKGFKPD---KCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVE 67
+ + FKP K K+ RI ++R ++ VR + ++ L+ QD A R E
Sbjct: 1 MFLRCFKPKFYKKSKSTTSYMKIRIDIVRRKRIAMVRNYKTDIVNFLKNGQDSEAYRRAE 60
Query: 68 HVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDVTELA 127
++ E + + YDLIE +C+ + +S++ ++ CP + +EA++S+I+A+ DV EL
Sbjct: 61 LLLEELRIISCYDLIERFCDCISENLSLMLKKRECPEECREAVSSLIYATAWVPDVPELK 120
Query: 128 DVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDT-QTKIKTLTSIAEEHNIK 186
D+R FT ++G A S V+ ++EK P + + KI+T+ +A E +I
Sbjct: 121 DLRAVFTKRFGNFIA---------SSVNHELVEKTELLRPPSRELKIQTVKDVANEFSIN 171
Query: 187 WEPKAFEEKLPKQNDDL 203
W+P + L ++ L
Sbjct: 172 WDPTPLKLMLLRETSAL 188
>AT1G51900.1 | chr1:19279884-19282895 REVERSE LENGTH=775
Length = 774
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 24 ALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVEHVIREEKFMQAYDLIE 83
L+ +R+ LL+++K + R +R ++ + ++ ++A R E ++ E + Y +
Sbjct: 19 VLKQLQSRLMLLKSQKYAKSRHLRADIVDFIRSNDSKSALFRTEQLLLVENAITIYGFLL 78
Query: 84 VYCELMVARMSIIDSQK-TCPI---DLKEAIASVIFASMRCSDVTELADVRKHFTSKYGK 139
+ + ++ R S S+K +C + D EA++S+IFAS++C ++ EL + + +YG+
Sbjct: 79 KFTDFILLRFS--PSKKHSCLLVNDDTSEAVSSLIFASVKCREIPELLIISELVGQRYGQ 136
Query: 140 EFAAAALEVRPDSGVSRLVIEKLSAGAPDTQT-KIKTLTSIAEEHNIKWE 188
+ A++V P + V+ + EKL + + ++T K + + IA+E + E
Sbjct: 137 RYVTTAIQVPPGNLVNTEIKEKLKSTSVVSETDKCRVMEEIAKESGYRLE 186
>AT3G15490.1 | chr3:5229785-5230646 FORWARD LENGTH=212
Length = 211
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 42 QVRQMRREVAQLLEADQDQTARIRVEHVIREEKFMQAYDLIEVYCELMVARMSIIDSQK- 100
VRQ R ++AQLL + A + + +E+ + AYD +E++C ++ +S + +
Sbjct: 1 MVRQSRSDIAQLLSYGRYSEALPKAKQFYEDERRLSAYDQVELFCTTILQNISSLKYENN 60
Query: 101 --TCPIDLKEAIASVIFASMRCSDVTELADVRKHFTSKYGKEFAAAALEVRPDSGVSRLV 158
P + K+A+A +IFA+ R ++ +L +R F ++G +F +++R + V +
Sbjct: 61 VDLLPEETKKAMAGIIFAASRIGELEDLQHIRSFFVQRFGLKFDKECVDLRQGNVVGFEI 120
Query: 159 IEKLS 163
++ L+
Sbjct: 121 VKILN 125
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.307 0.123 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,975,284
Number of extensions: 1069534
Number of successful extensions: 3682
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 3680
Number of HSP's successfully gapped: 13
Length of query: 1101
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 992
Effective length of database: 8,118,225
Effective search space: 8053279200
Effective search space used: 8053279200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 117 (49.7 bits)