BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0703400 Os01g0703400|AK061657
         (353 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47770.1  | chr5:19345297-19347415 FORWARD LENGTH=385          538   e-153
AT4G17190.1  | chr4:9648743-9650865 REVERSE LENGTH=343            526   e-150

>AT5G47770.1 | chr5:19345297-19347415 FORWARD LENGTH=385
          Length = 384

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 249/338 (73%), Positives = 291/338 (86%)

Query: 16  KAAFAEIYSRLKEEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGISVIDSFKMLKGT 75
           K+ F  +YS LK ++L DP+FEFT+ES  W+DRMLDYNV GGK NRG+SV+DSFK+LK  
Sbjct: 47  KSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLKQG 106

Query: 76  DVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGII 135
           + L ++E FL+C LGWCIEWLQAYFLVLDDIMDNS TRRGQPCWFRVPQVG++A+NDGI+
Sbjct: 107 NDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGIL 166

Query: 136 LRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHR 195
           LRNHI RIL++HF+ K YYVDL+DLFNEVE +TA GQ++DLITT EGEKDL KY+L++HR
Sbjct: 167 LRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLSIHR 226

Query: 196 RIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFI 255
           RIVQYKTAYYSFYLPVACALL++GENL+N  DVKN+LV+MG YFQVQDDYLDC+ DPE +
Sbjct: 227 RIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETL 286

Query: 256 GKIGTDIEDYKCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFH 315
           GKIGTDIED+KCSWLVV+ALER  E Q  IL+ENYGKPDP  VAKVKDLYKEL+LE VF 
Sbjct: 287 GKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGVFM 346

Query: 316 EYERESYNKLIADIEAHPNKAVQNVLKSFLHKIYKRQK 353
           EYE +SY KL   IE H +KA+Q VLKSFL KIYKRQK
Sbjct: 347 EYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384



>AT4G17190.1 | chr4:9648743-9650865 REVERSE LENGTH=343
          Length = 342

 Score =  526 bits (1354), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 243/338 (71%), Positives = 290/338 (85%)

Query: 16  KAAFAEIYSRLKEEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGISVIDSFKMLKGT 75
           K+ F ++YS LK ++L+DP+FEFT ES QW++RMLDYNV GGK NRG+SV+DS+K+LK  
Sbjct: 5   KSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLLKQG 64

Query: 76  DVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGII 135
             L ++ETFL+C LGWCIEWLQAYFLVLDDIMDNS TRRGQPCWFR P+VG+IA+NDGI+
Sbjct: 65  QDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAINDGIL 124

Query: 136 LRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHR 195
           LRNHI RIL++HF+   YYVDL+DLFNEVEF+TA GQ++DLITT +GEKDL+KY+L +HR
Sbjct: 125 LRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSLQIHR 184

Query: 196 RIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFI 255
           RIV+YKTAYYSFYLPVACALL++GENL+N  DVK +LV+MG YFQVQDDYLDC+ DPE +
Sbjct: 185 RIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFADPETL 244

Query: 256 GKIGTDIEDYKCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFH 315
           GKIGTDIED+KCSWLVV+ALER  E Q  IL+ENYGK +P  VAKVK LYKEL+LE  F 
Sbjct: 245 GKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFM 304

Query: 316 EYERESYNKLIADIEAHPNKAVQNVLKSFLHKIYKRQK 353
           EYE+ESY KL   IEAH +KA+Q VLKSFL KIYKRQK
Sbjct: 305 EYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.139    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,935,479
Number of extensions: 350786
Number of successful extensions: 748
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 748
Number of HSP's successfully gapped: 2
Length of query: 353
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 253
Effective length of database: 8,364,969
Effective search space: 2116337157
Effective search space used: 2116337157
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)