BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0698900 Os01g0698900|Os01g0698900
         (458 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10480.1  | chr4:6478089-6479079 REVERSE LENGTH=213             97   2e-20
AT3G12390.1  | chr3:3942344-3943595 FORWARD LENGTH=204             97   2e-20
AT3G49470.1  | chr3:18341072-18342273 FORWARD LENGTH=218           97   2e-20
AT5G13850.1  | chr5:4471361-4472676 FORWARD LENGTH=205             95   7e-20
AT1G33040.1  | chr1:11966547-11967696 FORWARD LENGTH=210           92   7e-19

>AT4G10480.1 | chr4:6478089-6479079 REVERSE LENGTH=213
          Length = 212

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 1/85 (1%)

Query: 339 AMMKLGMKPVTGVSRITIERAKNILFVVSKPHDVFKSPTSESYVIFGEAKIEDXXXXXXX 398
           AM+KLGMKPVT VSR+TI+R+KN+LFV+SKP DVFKSP SE+YVIFGEAKI+D       
Sbjct: 74  AMLKLGMKPVTDVSRVTIKRSKNVLFVISKP-DVFKSPNSETYVIFGEAKIDDMSSQLQA 132

Query: 399 XXXXXFRMQDLSKGIRTPYQDQAGT 423
                F+M D++  I      +A T
Sbjct: 133 QAAQRFKMPDVASMIPNTDGSEAAT 157



>AT3G12390.1 | chr3:3942344-3943595 FORWARD LENGTH=204
          Length = 203

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 339 AMMKLGMKPVTGVSRITIERAKNILFVVSKPHDVFKSPTSESYVIFGEAKIEDXXXXXXX 398
           AM+KLGMKP+TGVSR+T++++KNILFV+SKP DVFKSP S++YVIFGEAKIED       
Sbjct: 69  AMLKLGMKPITGVSRVTVKKSKNILFVISKP-DVFKSPASDTYVIFGEAKIEDLSSQIQS 127

Query: 399 XXXXXFRMQDLS 410
                F+  DLS
Sbjct: 128 QAAEQFKAPDLS 139



>AT3G49470.1 | chr3:18341072-18342273 FORWARD LENGTH=218
          Length = 217

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 1/71 (1%)

Query: 339 AMMKLGMKPVTGVSRITIERAKNILFVVSKPHDVFKSPTSESYVIFGEAKIEDXXXXXXX 398
           AM+KLGMKPVTGVSR+TI+R KN+LF +SKP DVFKSP SE+YVIFGEAKIED       
Sbjct: 79  AMLKLGMKPVTGVSRVTIKRTKNVLFFISKP-DVFKSPHSETYVIFGEAKIEDLSSQLQT 137

Query: 399 XXXXXFRMQDL 409
                FRM ++
Sbjct: 138 QAAQQFRMPEI 148



>AT5G13850.1 | chr5:4471361-4472676 FORWARD LENGTH=205
          Length = 204

 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 339 AMMKLGMKPVTGVSRITIERAKNILFVVSKPHDVFKSPTSESYVIFGEAKIEDXXXXXXX 398
           AM+KLGMKP+TGVSR+T++++KNILFV+SKP DVFKSP S++YVIFGEAKIED       
Sbjct: 65  AMLKLGMKPITGVSRVTVKKSKNILFVISKP-DVFKSPASDTYVIFGEAKIEDLSSQLQS 123

Query: 399 XXXXXFRMQDLS 410
                F+  +LS
Sbjct: 124 QAAEQFKAPNLS 135



>AT1G33040.1 | chr1:11966547-11967696 FORWARD LENGTH=210
          Length = 209

 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 339 AMMKLGMKPVTGVSRITIERAKNILFVVSKPHDVFKSPTSESYVIFGEAKIEDXXXXXXX 398
           A++KLGMKPV+ VSR+TI+RAKN+LFV+SKP DV+KSP +E+YVIFGEAK++D       
Sbjct: 71  AVLKLGMKPVSDVSRVTIKRAKNVLFVISKP-DVYKSPNAETYVIFGEAKVDDLSSQLQT 129

Query: 399 XXXXXFRMQDLS 410
                F+M D++
Sbjct: 130 QAAQRFKMPDVT 141



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,368,762
Number of extensions: 265058
Number of successful extensions: 467
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 464
Number of HSP's successfully gapped: 5
Length of query: 458
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 356
Effective length of database: 8,310,137
Effective search space: 2958408772
Effective search space used: 2958408772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)