BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0696100 Os01g0696100|Os01g0696100
(384 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18160.1 | chr4:10055696-10057546 FORWARD LENGTH=437 267 6e-72
AT5G46370.1 | chr5:18809623-18811720 REVERSE LENGTH=444 263 1e-70
AT4G01840.1 | chr4:793403-794933 FORWARD LENGTH=409 247 6e-66
AT5G55630.1 | chr5:22531718-22532893 FORWARD LENGTH=364 179 3e-45
AT1G02510.1 | chr1:520687-521626 REVERSE LENGTH=285 159 2e-39
AT5G46360.1 | chr5:18806858-18808134 REVERSE LENGTH=261 134 1e-31
>AT4G18160.1 | chr4:10055696-10057546 FORWARD LENGTH=437
Length = 436
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/283 (48%), Positives = 198/283 (69%), Gaps = 1/283 (0%)
Query: 100 SFARQAIVSVILYISIGVLVYITNVEGFKGRSTLKLVDGLYFTIISLCTIGYGDIVPCTT 159
S RQA +++Y+S+GVL+Y N + + T +VDGLYF I+++CTIGYGDI P +
Sbjct: 148 SVVRQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSV 207
Query: 160 FTKVFTCLFLLIGVRFVDIVLNELLTNVLDKQRTVLLSTMDDNKLNRVFDTYMIDAEKKR 219
TK+F+ +F+L+G F+DI+L+ +++ VLD Q + +L + +Y+ID +K R
Sbjct: 208 VTKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKRRDEPEKRRSYIIDVKKGR 267
Query: 220 SRGRMKVLLALGVVVGTISICTIIVHEVEGLNWIDSFYLSVISVTTVGYGDYGFSTPAGR 279
R R+KV LALGVVV I++ I+H +E + W+DSFYLSV+SVTTVGYGD F T GR
Sbjct: 268 MRIRLKVALALGVVVLCIAVGVGIMHFIEEIGWLDSFYLSVMSVTTVGYGDRAFKTLPGR 327
Query: 280 LSATVCLLVSTLAVAKAFLFLTDLRMDRRNRKTTKWILQKKMD-NEPLAADLDHDASVSK 338
L A + LLVSTLAVA+AFL+L + R+D+RNR+ K +L + M ++ AAD+D++ VSK
Sbjct: 328 LFAAIWLLVSTLAVARAFLYLAEARVDKRNRERAKKVLCETMSVSQFFAADIDNNGCVSK 387
Query: 339 SDFLIYKLKEIGKIDDKDIAMISDQFDQLGLAKCGKITLADII 381
++++IYKLKE+ KI DKDI IS QFD+L GKITL D++
Sbjct: 388 AEYVIYKLKEMEKITDKDILPISKQFDKLDRCSNGKITLLDLL 430
>AT5G46370.1 | chr5:18809623-18811720 REVERSE LENGTH=444
Length = 443
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 215/339 (63%), Gaps = 13/339 (3%)
Query: 48 PNHPLHTSGNGNIVTAQNFQRVHSSPSMFTSIKETPCADEFNEQSHAAQHVPSFARQAIV 107
PN P+ S NF R ++P+M + D +Q ++ + QA+
Sbjct: 100 PNKPVRKSK-----PTINFHRSKTAPAMAAINNISHPNDPKTDQQSDSKTI---VNQAVA 151
Query: 108 SVILYISIGVLVYITNVEGFKGRSTLKLVDGLYFTIISLCTIGYGDIVPCTTFTKVFTCL 167
+++Y+S+GVL+Y N + + + T +VD LYF I+++CTIGYGDI P + TK+F+
Sbjct: 152 LLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIF 211
Query: 168 FLLIGVRFVDIVLNELLTNVLDKQRTVLLSTMDDNKLN----RVFDTYMIDAEKKRSRGR 223
F+L+G F+DI+L+ ++T VLD Q +L T + LN +Y+ID +K R R R
Sbjct: 212 FVLVGFGFMDILLSGMVTYVLDLQENYMLETARNESLNLNDRDKVRSYIIDVKKGRMRIR 271
Query: 224 MKVLLALGVVVGTISICTIIVHEVEGLNWIDSFYLSVISVTTVGYGDYGFSTPAGRLSAT 283
+KV LALGVVV + +I+H VE + W+DSFY SV+SVTTVGYGD F+T AGRL A
Sbjct: 272 LKVGLALGVVVLCLGFGVLIMHFVEKIGWLDSFYFSVMSVTTVGYGDRAFNTLAGRLLAA 331
Query: 284 VCLLVSTLAVAKAFLFLTDLRMDRRNRKTTKWILQKKMD-NEPLAADLDHDASVSKSDFL 342
+ LLVSTLAVA+A LFL + R+D+RNR+ K +L + M ++ L AD+D + VSK++F+
Sbjct: 332 MWLLVSTLAVARAILFLAESRVDKRNRERAKKVLGESMSISQFLDADIDCNGCVSKAEFV 391
Query: 343 IYKLKEIGKIDDKDIAMISDQFDQLGLAKCGKITLADII 381
IYKLK++ KI +KDI I QFD+L G+ITL D++
Sbjct: 392 IYKLKKMDKITEKDINPIGFQFDKLDRTNSGRITLLDLL 430
>AT4G01840.1 | chr4:793403-794933 FORWARD LENGTH=409
Length = 408
Score = 247 bits (631), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 228/392 (58%), Gaps = 43/392 (10%)
Query: 2 EEHLLPVVHRD---QVYSSRQDRRKSSDVPNRFVTSFHPSTNSKGNPNTPNHPLHTSGNG 58
+E LL + H+D V ++D+ SD NRF++ PLH
Sbjct: 46 QERLL-LHHQDLEQSVQDDKEDQDSDSDETNRFLSQ--------------TRPLH----- 85
Query: 59 NIVTAQNFQRVHSSPSMFTSIKETPCADEFNEQSHAAQHVPSFARQAIVSVILYISIGVL 118
R ++P+M E + S ++ S RQAI +I+Y+++GV
Sbjct: 86 ---------RSRTAPAMVIIKDLRTKPPETKKPSPVSK---SIIRQAIFLLIVYLTLGVS 133
Query: 119 VYITNVEGFKGRSTLKLVDGLYFTIISLCTIGYGDIVPCTTFTKVFTCLFLLIGVRFVDI 178
+Y N + + G T +VD LYF I+++CTIGYGDI P T +TK+F +F+L G F+DI
Sbjct: 134 IYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDI 193
Query: 179 VLNELLTNVLDKQRTVLLSTMDDNKLNRVFDT-------YMIDAEKKRSRGRMKVLLALG 231
+L+ ++ VLD Q +++L+ + + ++ Y+ID EK R R RMKV LAL
Sbjct: 194 LLSGVVNYVLDLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEKGRMRIRMKVCLALC 253
Query: 232 VVVGTISICTIIVHEVEGLNWIDSFYLSVISVTTVGYGDYGFSTPAGRLSATVCLLVSTL 291
VVV I + +++H VE L ++DS YLSV+SVTTVGYGD F T GRL A V LLVSTL
Sbjct: 254 VVVLCIGVGALVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQGRLFAAVWLLVSTL 313
Query: 292 AVAKAFLFLTDLRMDRRNRKTTKWILQKKMD-NEPLAADLDHDASVSKSDFLIYKLKEIG 350
AVA+AFL+L + R+DRR+RK K L +++ ++ L AD +SKS++++ KLKE+G
Sbjct: 314 AVARAFLYLAEARIDRRHRKAVKLALNREITVDDLLKADTYQHGFISKSEYIVLKLKEMG 373
Query: 351 KIDDKDIAMISDQFDQLGLAKCGKITLADIIG 382
KI KDI + QF++L + GKITL D++G
Sbjct: 374 KITQKDIDQVVIQFEKLDPNQIGKITLPDLLG 405
>AT5G55630.1 | chr5:22531718-22532893 FORWARD LENGTH=364
Length = 363
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 172/302 (56%), Gaps = 10/302 (3%)
Query: 87 EFNEQSHAAQHVPSFA------RQAIVSVILYISIGVLVYITNVEGFKGRSTLKLVDGLY 140
+ +E +P F+ R+ I+ + LY++IG L + + G T +VD LY
Sbjct: 55 KIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALY 114
Query: 141 FTIISLCTIGYGDIVPCTTFTKVFTCLFLLIGVRFVDIVLNELLTNVLDKQRTVLLSTMD 200
F I+++ T+GYGD+VP ++ +++ C F+ G+ V +L+ +++KQ +L+
Sbjct: 115 FCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAF- 173
Query: 201 DNKLNRVFDTYMIDAEKKRSRGRMKVLLALGVVVGTISICTIIVHEVEGLNWIDSFYLSV 260
L + F I E ++ R K V+V + TI + VE + I +FY
Sbjct: 174 --HLRQSFGPTDILKELHTNKLRYKCYATCLVLVVLFIVGTIFLVMVEKMPVISAFYCVC 231
Query: 261 ISVTTVGYGDYGFSTPAGRLSATVCLLVSTLAVAKAFLFLTDLRMDRRNRKTTKWILQKK 320
+VTT+GYGD F++ AGRL A +L S++ +A+ FL++ +L + + R KW+L ++
Sbjct: 232 STVTTLGYGDKSFNSEAGRLFAVFWILTSSICLAQFFLYVAELNTENKQRALVKWVLTRR 291
Query: 321 MDNEPL-AADLDHDASVSKSDFLIYKLKEIGKIDDKDIAMISDQFDQLGLAKCGKITLAD 379
+ N L AADLD D V ++F++YKLKE+GKID+KDI+ I D+F+QL + G +T +D
Sbjct: 292 ITNNDLEAADLDEDGVVGAAEFIVYKLKEMGKIDEKDISGIMDEFEQLDYDESGTLTTSD 351
Query: 380 II 381
I+
Sbjct: 352 IV 353
>AT1G02510.1 | chr1:520687-521626 REVERSE LENGTH=285
Length = 284
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 31/286 (10%)
Query: 89 NEQSHAAQHVPSFARQ-------AIVSVILYISIGVLVYITNVEGFKGRSTLKLVDGLYF 141
NE S V + ++ A++ +++Y++ GV Y + F G T VD YF
Sbjct: 15 NESSPEETQVTTVSKSKWTILVLAMILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYF 74
Query: 142 TIISLCTIGYGDIVPCTTFTKVFTCLFLLIGVRFVDIVLNELLTNVLDKQRTVLLSTMDD 201
+I++ T+GYGDIVP T+ TK+ T + + GV F+D +LN ++++VL Q +L ++
Sbjct: 75 SIVTFSTVGYGDIVPSTSTTKILTIVLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINK 134
Query: 202 NKLNRVFDTYMIDAEKKRSRGRMKVLLALGVVVGTISICTIIVHEVEGLNWIDSFYLSVI 261
+ NR ++ AE + R + K+ LA V + + +H E L+W+DS YLSVI
Sbjct: 135 TR-NRAIRDHI--AEDGKIRLKWKLCLAFCAVGLCVGSGALFLHVFERLDWLDSVYLSVI 191
Query: 262 SVTTVGYGDYGFSTPAGRLSATVCLLVSTLAVAKAFLFLTDLRMDRRNRKTTKWILQKKM 321
SVTTVGYGD F T GR A LL+ST+A+A FL+L ++R+DR M
Sbjct: 192 SVTTVGYGDKTFKTVEGRGFAVFWLLLSTIAMATLFLYLAEMRIDRTT----------VM 241
Query: 322 DNEPLAADLDHDASVSKSDFLIYKLKEIGKIDDKDIAMISDQFDQL 367
P S+S+F+++KL+E G+I + DI I +F+ L
Sbjct: 242 KLPP-----------SESEFIVFKLRESGRISEDDIKQIVREFENL 276
>AT5G46360.1 | chr5:18806858-18808134 REVERSE LENGTH=261
Length = 260
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 228 LALGVVVGTISICT-IIVHEVEGLNWIDSFYLSVISVTTVGYGDYGFSTPAGRLSATVCL 286
+A+ + ++ C +IVH V + W+DSF SV+ VTTVG+GD F+T G A V L
Sbjct: 100 VAVALYFFVVTFCGFLIVHFVVKIGWLDSFCFSVMMVTTVGFGDRAFNTWLGTFLAAVWL 159
Query: 287 LVSTLAVAKAFLFLTDLRMDRRNRKTTKWILQKKMD-NEPLAADLDHDASVSKSDFLIYK 345
LVSTLAVA+AFLFL D R D+RNR+ K +L + + ++ AAD+D+D +S ++F IYK
Sbjct: 160 LVSTLAVARAFLFLADARADKRNRERAKKVLGESISISQFFAADIDNDGRLSLAEFAIYK 219
Query: 346 LKEIGKIDDKDIAMISDQFDQLGLAKCGKITLADI 380
LK++ KI +D I +QFD+L + G+ITL D+
Sbjct: 220 LKQMEKITQEDFIQICNQFDKLDRTQSGRITLVDL 254
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,158,250
Number of extensions: 341714
Number of successful extensions: 1012
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 992
Number of HSP's successfully gapped: 6
Length of query: 384
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 284
Effective length of database: 8,364,969
Effective search space: 2375651196
Effective search space used: 2375651196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)