BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0695300 Os01g0695300|AK099451
         (307 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47770.1  | chr5:19345297-19347415 FORWARD LENGTH=385          446   e-126
AT4G17190.1  | chr4:9648743-9650865 REVERSE LENGTH=343            441   e-124

>AT5G47770.1 | chr5:19345297-19347415 FORWARD LENGTH=385
          Length = 384

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/307 (67%), Positives = 260/307 (84%), Gaps = 2/307 (0%)

Query: 1   MLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI 60
           MLDYNV GGKLNRGL+VV+S+K+LK  +  + +E+E+FL+C LGW IEWLQAYFLVLDDI
Sbjct: 80  MLDYNVRGGKLNRGLSVVDSFKLLKQGN--DLTEQEVFLSCALGWCIEWLQAYFLVLDDI 137

Query: 61  MDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEI 120
           MDNS TRRG+PCWFR+P+VG++AINDG++LR+ I RI +++FR K YYVDL+DLFNEVE+
Sbjct: 138 MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL 197

Query: 121 QTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFDESLDNYA 180
           QT  GQ++D ITT EG KDL KY++ ++RRIV+YKTAYYSFYLPVACALL+  E+L+N+ 
Sbjct: 198 QTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHI 257

Query: 181 QVKHILVEMGVYFQSQDDYLDCFGEPEIIGKIGSDIEDFKCSWLFVQALERADEKQKGVL 240
            VK++LV+MG+YFQ QDDYLDCF +PE +GKIG+DIEDFKCSWL V+ALER  E+Q  +L
Sbjct: 258 DVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKIL 317

Query: 241 FENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAVRAVLKSFLH 300
           +ENYGK DP+ VAKVKDLY EL L+ VF EYE +SYEKL  AIE   ++A++AVLKSFL 
Sbjct: 318 YENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLA 377

Query: 301 KIYKRSK 307
           KIYKR K
Sbjct: 378 KIYKRQK 384



>AT4G17190.1 | chr4:9648743-9650865 REVERSE LENGTH=343
          Length = 342

 Score =  441 bits (1135), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/307 (67%), Positives = 255/307 (83%), Gaps = 2/307 (0%)

Query: 1   MLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI 60
           MLDYNV GGKLNRGL+VV+SYK+LK     + +E+E FL+C LGW IEWLQAYFLVLDDI
Sbjct: 38  MLDYNVRGGKLNRGLSVVDSYKLLKQGQ--DLTEKETFLSCALGWCIEWLQAYFLVLDDI 95

Query: 61  MDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEI 120
           MDNS TRRG+PCWFR PKVG+IAINDG++LR+ I RI +++FR   YYVDL+DLFNEVE 
Sbjct: 96  MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 155

Query: 121 QTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFDESLDNYA 180
           QT  GQ++D ITT +G KDL+KY++ ++RRIVEYKTAYYSFYLPVACALL+  E+L+N+ 
Sbjct: 156 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 215

Query: 181 QVKHILVEMGVYFQSQDDYLDCFGEPEIIGKIGSDIEDFKCSWLFVQALERADEKQKGVL 240
            VK +LV+MG+YFQ QDDYLDCF +PE +GKIG+DIEDFKCSWL V+ALER  E+Q  +L
Sbjct: 216 DVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKIL 275

Query: 241 FENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAVRAVLKSFLH 300
           +ENYGK++P+ VAKVK LY EL L+  F EYE+ESYEKL   IEA  ++A++AVLKSFL 
Sbjct: 276 YENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLA 335

Query: 301 KIYKRSK 307
           KIYKR K
Sbjct: 336 KIYKRQK 342



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.139    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,668,442
Number of extensions: 285274
Number of successful extensions: 652
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 650
Number of HSP's successfully gapped: 2
Length of query: 307
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 209
Effective length of database: 8,419,801
Effective search space: 1759738409
Effective search space used: 1759738409
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)