BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0678500 Os01g0678500|AB100696
         (757 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G03560.1  | chr4:1580253-1585691 FORWARD LENGTH=734            789   0.0  

>AT4G03560.1 | chr4:1580253-1585691 FORWARD LENGTH=734
          Length = 733

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/715 (53%), Positives = 493/715 (68%), Gaps = 8/715 (1%)

Query: 46  GSRQYQRRSDALAYGNRYQKAAALVDLAEDGVGIPEDVLNDTRFERAMRFYFVYLRLDXX 105
           G     RRS+A+ +G  +QKAAALVDLAEDG+G+P ++L+ + F  + R+YF++ RLD  
Sbjct: 14  GGTDRVRRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLI 73

Query: 106 XXXXXXXXXXXXXXEKPLWCRGYSQHACDQRDLYFLGQLPYLSKTESLIYEGLTLVILVM 165
                         E+PLWC    + +C  RD Y+LG+LPYL+  ES+IYE +TL IL++
Sbjct: 74  WSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLV 133

Query: 166 DIFYPLSYEGLNLFWKNTINKLKVLLLFILACDILV-------FAFSPQPFRVAPYIRVA 218
             F+P+SYEG  +FW + +N +KV  + IL  D+LV        AF   PFR+APY+RV 
Sbjct: 134 HTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVI 193

Query: 219 FLIMNIRELRMCAVTLVGMVGTYLNVXXXXXXXXXXXXXXXYVTFEDTPQGKTVFSSYGT 278
             I++IRELR   V L GM+GTYLN+               +V FEDT QG TVF+SYG 
Sbjct: 194 IFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGA 253

Query: 279 TLYQMFILFTTSNNPDVWVPAYKSSRWSSLFFIVYVLLGVYFLTNLILAVIYDSFKEQLA 338
           TLYQMFILFTTSNNPDVW+PAYKSSRWSS+FF++YVL+GVYF+TNLILAV+YDSFKEQLA
Sbjct: 254 TLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLA 313

Query: 339 KQVSQADCTRKSILEKAFGIIDATGQGYLNKEQCLSLLDELNKYRSLPKTSREDFELIFA 398
           KQVS  D  ++ +LEKAFG+ID+   G ++K QC+ L ++L  YR+LPK S+E+F LIF 
Sbjct: 314 KQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFD 373

Query: 399 ELDQSGDFKVTSEEFATLCNTIAIKFQKEPPPSYLEKYPSFYHSALCEWLKSFVRSPLFE 458
           ELD + DFK+  +EFA LC  IA++FQKE  PS  E +P  YHSAL + L++FVRSP F 
Sbjct: 374 ELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFG 433

Query: 459 YIVIFVLLMNLVAVIIETTLDIENSSSQKVWQEVEFVFGWIYVIEMALKIFSLGFGAYWM 518
           Y + F+L++N +AV++ETTLDIE SS+QK WQ  EFVFGWIYV+EMALKI++ GF  YW 
Sbjct: 434 YAISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWR 493

Query: 519 EGQNKFDFVLTWTIFIGETLTFAFPSKLSFLSNGEWIRYLLLGRMLRLTRILLQXXXXXX 578
           EG N+FDF++TW I IGET TF  P + +F SNGEWIRYLLL RMLRL R+L+       
Sbjct: 494 EGANRFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRA 553

Query: 579 XXXXXXXLMSSLMPYLGIVFCTLCIYCSLGLQIFGGIVYAGNPTLEETDLFSNDYLLFNF 638
                  L+ SLMPYLG +FC LCIYCS+G+Q+FGG+V AGN  L ET+L  +DYLLFNF
Sbjct: 554 FIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNF 613

Query: 639 NDYPSGMVTLFNLLVMGNWQAWMESYRQLTGSYWSLIYFXXXXXXXXXXXXXXXXXXXXE 698
           NDYP+GMVTLFNLLVMGNWQ WMESY+ LTG++WS+ YF                    E
Sbjct: 614 NDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLE 673

Query: 699 AFFAEMELEKDGEADIQDPTLEGXXXXXXXXXXTKGTMVDILLHHMLSNELDGSQ 753
           AFF E++LE++ +   QD + E           ++   VD LLHHML +EL   +
Sbjct: 674 AFFTELDLEEEEKCQGQD-SQEKRNRRRSAGSKSRSQRVDTLLHHMLGDELSKPE 727



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.325    0.141    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,071,301
Number of extensions: 538524
Number of successful extensions: 1652
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1647
Number of HSP's successfully gapped: 1
Length of query: 757
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 651
Effective length of database: 8,200,473
Effective search space: 5338507923
Effective search space used: 5338507923
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 116 (49.3 bits)