BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0662800 Os01g0662800|Os01g0662800
(242 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209 99 2e-21
AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212 96 1e-20
AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296 92 2e-19
AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399 65 3e-11
AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353 64 8e-11
AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121 62 4e-10
AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140 61 4e-10
AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304 60 9e-10
AT3G20750.1 | chr3:7255016-7256140 FORWARD LENGTH=209 59 2e-09
AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332 59 2e-09
AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309 59 3e-09
AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150 58 5e-09
AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323 58 5e-09
AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270 58 5e-09
AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241 57 6e-09
AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309 57 7e-09
AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265 57 1e-08
AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198 54 5e-08
AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292 54 5e-08
AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191 54 6e-08
AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275 54 1e-07
AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340 52 2e-07
AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205 52 3e-07
AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313 51 7e-07
AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239 48 5e-06
>AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209
Length = 208
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 7/105 (6%)
Query: 55 YGGGGSVDCTLSLGTPSTRRAEAAVAGLPWDQSSLQPSCNGRQEMSGAAAPRTEPXXXXX 114
+ SVDCTLSLGTPSTR + S+ + +G + G A +
Sbjct: 32 FSSSTSVDCTLSLGTPSTRLDDHHRF-----SSANSNNISGDFYIHGGNAKTSS--YKKG 84
Query: 115 XXXXXXPRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERR 159
PRRCA+CDTTSTPLWRNGP+GPKSLCNACGIR+KKEERR
Sbjct: 85 GVAHSLPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERR 129
>AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212
Length = 211
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 46 GDGEYPDVPYGGGGSVDCTLSLGTPSTRRAEAAVAGLPWDQSSLQPSCNGRQEMSGAAAP 105
D + PY SVDCTLSLGTPSTR ++ + + + G
Sbjct: 11 NDVSHHSSPYA---SVDCTLSLGTPSTRLC---------NEDDERRFSSHTSDTIGWDFL 58
Query: 106 RTEPXXXXXXXXXXXPRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXX 165
RRCANCDTTSTPLWRNGPRGPKSLCNACGIR+KKEERR
Sbjct: 59 NGSKKGGGGGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-----A 113
Query: 166 XXXXXXSDGGVEYAYGYPRQQQQ 188
+ GG A G P Q
Sbjct: 114 STARNSTSGGGSTAAGVPTLDHQ 136
>AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296
Length = 295
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 62/123 (50%), Gaps = 24/123 (19%)
Query: 61 VDCTLSLGTPSTR-------RAEAAVAGLPWDQSSLQPSCNGRQEMSGAAAPRTEPXXXX 113
VDCTLSLGTPSTR R + +G S+ + + S A P
Sbjct: 67 VDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNFWDLIHTKNNNSKTAPYNNVPSFSA 126
Query: 114 XX-----------------XXXXXPRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKE 156
RRCANCDTTSTPLWRNGPRGPKSLCNACGIR+KKE
Sbjct: 127 NKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKE 186
Query: 157 ERR 159
ERR
Sbjct: 187 ERR 189
>AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399
Length = 398
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKK 155
R C++C+TT TPLWR+GPRGPKSLCNACGIR +K
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 263
>AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353
Length = 352
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 29/31 (93%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIR 152
R C++C+TT TPLWR+GPRGPKSLCNACGIR
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229
>AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121
Length = 120
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 158
C+ C TT TP+WR GP GPKSLCNACGIR++K+ R
Sbjct: 28 CSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRR 62
>AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140
Length = 139
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 121 PRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXSDGGVEYAY 180
+ CA+C T+ TPLWR GP GPKSLCNACGIR +K +RR S GG +
Sbjct: 35 KKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRK-KRRGGTEDNKKLKKSSSGGGNRKF 93
Query: 181 GYPRQQ 186
G +Q
Sbjct: 94 GESLKQ 99
>AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304
Length = 303
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 73 RRAEAAVAGLPWDQSSLQPSCNGRQEMSGAAAPRTEPXXXXXXXXXXXPRRCANCDTTST 132
R+ E + G P + + +++ RT R+C +C+TT T
Sbjct: 171 RKPEKSTPGKPESECYFSSEQHAKKKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKT 230
Query: 133 PLWRNGPRGPKSLCNACGIRYK 154
P WR GP GPK+LCNACG+R++
Sbjct: 231 PQWREGPSGPKTLCNACGVRFR 252
>AT3G20750.1 | chr3:7255016-7256140 FORWARD LENGTH=209
Length = 208
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 126 NCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERR 159
NC+ +TP+WR GP GPKSLCNACGI+++KEE R
Sbjct: 163 NCNALNTPMWRRGPLGPKSLCNACGIKFRKEEER 196
>AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332
Length = 331
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
RRC +C T TP WR GP GPK+LCNACG+RYK
Sbjct: 219 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYK 251
>AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309
Length = 308
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
RRC +C T TP WR GP GPK+LCNACG+RYK
Sbjct: 197 RRCLHCATEKTPQWRTGPMGPKTLCNACGVRYK 229
>AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150
Length = 149
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 158
CA C T+ TPLWR GP GPKSLCNACGIR +K+ R
Sbjct: 43 CAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRR 77
>AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323
Length = 322
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
R+C +C+ T TP WR GP GPK+LCNACG+RYK
Sbjct: 229 RKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYK 261
>AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270
Length = 269
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
RRC++C T +TP WR GP GPK+LCNACG+R+K
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFK 212
>AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241
Length = 240
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 68 GTPSTRRAEA---AVAGLPWDQSSLQPSCNGRQEMSGAAAPRTEPXXXXXXXXXXXPRRC 124
G P +RR+ A +VAG W S C+ A P+ + RRC
Sbjct: 108 GKPRSRRSRAPAPSVAGT-WAPMSESELCHS------VAKPKPKKVYNAESVTADGARRC 160
Query: 125 ANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
+C + TP WR GP GPK+LCNACG+RYK
Sbjct: 161 THCASEKTPQWRTGPLGPKTLCNACGVRYK 190
>AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309
Length = 308
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
R C +C+T +TP WR GP GPK+LCNACG+R+K
Sbjct: 218 RICTHCETITTPQWRQGPSGPKTLCNACGVRFK 250
>AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265
Length = 264
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
RRC +C + TP WR GP GPK+LCNACG+R+K
Sbjct: 179 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFK 211
>AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198
Length = 197
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKE 156
C +C T+ TPLWR GP GPKSLCNACGI+ +K+
Sbjct: 39 CVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKK 71
>AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292
Length = 291
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
C +C+TT+TP WR GP G K+LCNACGIR++
Sbjct: 193 CTHCETTTTPQWREGPNGRKTLCNACGIRFR 223
>AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191
Length = 190
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 121 PRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKE 156
R C +C T TPLWR GP GPKSLCNACGI+ +K+
Sbjct: 41 KRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK 76
>AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275
Length = 274
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
R+C +C TP WR GP GPK+LCNACG+RYK
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYK 226
>AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340
Length = 339
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
R+C++C TP WR GP G K+LCNACG+RYK
Sbjct: 249 RKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYK 281
>AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205
Length = 204
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
C++C T TPLWR GPRG +LCNACG+RY+
Sbjct: 117 CSHCGTRKTPLWREGPRGAGTLCNACGMRYR 147
>AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313
Length = 312
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
R+C +C TP WR GP G K+LCNACG+RYK
Sbjct: 221 RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYK 253
>AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239
Length = 238
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
C++C TP WR GP G K+LCNACG+R+K
Sbjct: 166 CSHCGVQKTPQWRMGPLGAKTLCNACGVRFK 196
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.136 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,983,028
Number of extensions: 194337
Number of successful extensions: 348
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 348
Number of HSP's successfully gapped: 26
Length of query: 242
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 146
Effective length of database: 8,474,633
Effective search space: 1237296418
Effective search space used: 1237296418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)