BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0660800 Os01g0660800|J075052N14
(199 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13870.2 | chr4:8023563-8025542 REVERSE LENGTH=289 99 1e-21
AT3G12410.1 | chr3:3946267-3946959 REVERSE LENGTH=231 97 6e-21
AT3G12460.1 | chr3:3954695-3955423 REVERSE LENGTH=243 94 4e-20
AT2G36110.1 | chr2:15161877-15162596 FORWARD LENGTH=240 92 2e-19
AT3G12470.1 | chr3:3956123-3956785 REVERSE LENGTH=221 83 1e-16
AT3G12440.1 | chr3:3951199-3952260 REVERSE LENGTH=354 75 2e-14
AT3G12420.1 | chr3:3948014-3948882 REVERSE LENGTH=186 70 6e-13
AT5G48350.1 | chr5:19593566-19594165 FORWARD LENGTH=200 69 2e-12
AT3G12430.1 | chr3:3949580-3950377 REVERSE LENGTH=239 68 3e-12
AT1G56310.1 | chr1:21082863-21085564 FORWARD LENGTH=590 59 2e-09
AT3G11770.1 | chr3:3721490-3722092 REVERSE LENGTH=201 52 2e-07
AT5G06450.1 | chr5:1967869-1968489 REVERSE LENGTH=207 47 6e-06
>AT4G13870.2 | chr4:8023563-8025542 REVERSE LENGTH=289
Length = 288
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 47 IVGLDVEWRPSY--GPAQNPVALLQLCVDRR-CLIFQLLYADYVPGSLRRFLAGAADCFV 103
VGLD+EWRPS+ G VA +Q+CVD C + + ++ +P SL+ + + V
Sbjct: 129 FVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHSG-IPQSLQHLIEDSTLVKV 187
Query: 104 GVGVDKDAERLSDDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQR 163
G+G+D D+ +L D+G+++ + DL LA Q++G + + GL ++ ++ +L+KP R
Sbjct: 188 GIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGDK--KWGLASLTETLVCKELLKPNR 245
Query: 164 VTMSRWDASCLSNEQIRYACIDAYVSFEVGRRL 196
+ + W+ LS +Q++YA DAY S+ + + L
Sbjct: 246 IRLGNWEFYPLSKQQLQYAATDAYASWHLYKVL 278
>AT3G12410.1 | chr3:3946267-3946959 REVERSE LENGTH=231
Length = 230
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 29/204 (14%)
Query: 15 FGDAVITTTVTSSGAAVEGWLREV----RAAYGPGLIVGLDVEWRP-SYGP--------- 60
FGD I T VT + + W+R V R + P L+VG+ V+W P SY
Sbjct: 23 FGDEFIVT-VTWDSSVISRWIRNVLFNNRFSSHP-LVVGVGVQWTPFSYYSDPRPNNYYA 80
Query: 61 --------AQNPVALLQLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFVGVGVDKDAE 112
+ NP +LQLCV RCLI QL Y D VP +LR FLA FVGV +DA
Sbjct: 81 DPPPIRYYSDNPADILQLCVGNRCLIIQLGYCDQVPNNLRSFLADPETTFVGVWNGQDAG 140
Query: 113 RLSD-DHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGAD--LVKPQRVTMSRW 169
+L+ H L + D+R GR + ++ + +V MG ++ P+ ++MS W
Sbjct: 141 KLARCCHQLEIGELLDIRRYVTDSWGR-SMRRSSFEEIVEECMGYQGVMLDPE-ISMSDW 198
Query: 170 DASCLSNEQIRYACIDAYVSFEVG 193
A L +QI A +DAYV ++G
Sbjct: 199 TAYDLDLDQILQASLDAYVCHQLG 222
>AT3G12460.1 | chr3:3954695-3955423 REVERSE LENGTH=243
Length = 242
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 96/206 (46%), Gaps = 35/206 (16%)
Query: 15 FGDAVITTTVTSSGAAVEGWLREV----RAAYGPGLIVGLDVEWRPS-YGPAQNPVAL-- 67
FG+ + T VT + + W+ +V R + P L+VG+ V+W PS Y PA PV+
Sbjct: 22 FGEELFVT-VTPDPSVIGQWIHDVFFHNRLSSHP-LVVGVGVQWTPSGYHPASPPVSYRS 79
Query: 68 ------------------------LQLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFV 103
LQLCV RC+I QL Y + VP LR FLA + FV
Sbjct: 80 DSSPDSYRSDSPPVFYSSDPPADTLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDNTFV 139
Query: 104 GVGVDKDAERLS-DDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQ 162
G+ +DA +L H L +A DLR + GR + L+ +V +G V+
Sbjct: 140 GIWNSQDAGKLERSRHQLEIAELMDLREFVSDSSGRRSMYNYSLEKIVEENLGYPGVRLD 199
Query: 163 R-VTMSRWDASCLSNEQIRYACIDAY 187
R V+MS W LS +QI A ID Y
Sbjct: 200 REVSMSDWRVYNLSYDQILQASIDVY 225
>AT2G36110.1 | chr2:15161877-15162596 FORWARD LENGTH=240
Length = 239
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 15 FGDAVITTTVTSSGAAVEGWLREVR----AAYGPGLIVGLDVEWRPSYGPAQNPVALLQL 70
FG+ +I T VT + + + W+ +R L+VGLDV+W P G + P +LQL
Sbjct: 22 FGERLIVT-VTHTTSTIRRWIHSIRFFSRLRSSHPLVVGLDVQWTP--GGSDPPPDILQL 78
Query: 71 CVDRRCLIFQLLYADYVPGSLRRFLAGAADCFVGVGVDKDAERLSD-DHGLTVANTADLR 129
CV RCLI QL + +P LR FL FVGV +D +L H L + D+R
Sbjct: 79 CVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVGVWNSQDQGKLERFRHQLEIWRLLDIR 138
Query: 130 PLAAQRLGRPELSQAGLQAVVRAVMGADLV-KPQRVTMSRWDASCLSNEQIRYACIDAYV 188
R L + + +V +G V K + + MS W A LS++QI A D YV
Sbjct: 139 HYLPTR-----LLNSSFEKIVEECLGYKGVRKDKEICMSNWGARSLSHDQIVQASDDVYV 193
Query: 189 SFEVG 193
++G
Sbjct: 194 CCKLG 198
>AT3G12470.1 | chr3:3956123-3956785 REVERSE LENGTH=221
Length = 220
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 15 FGDAVITTTVTSSGAAVEGWLREVRA-----AYGPGLIVGLDVEWRPSYGPAQNPVALLQ 69
FGD +I T VT + + + W+R VR+ + P L+VG+ V+WRP P LQ
Sbjct: 22 FGDDLIVT-VTPTASVIRRWIRSVRSYNRNHSVHP-LVVGIGVQWRPDSSDPDPPPKTLQ 79
Query: 70 LCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFVGVGVDKDAERLSD-DHGLTVANTADL 128
LCV RCLI QL Y +P LR FLA FVGV +D ++L H + + D+
Sbjct: 80 LCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHRVEIGKLLDI 139
Query: 129 RPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQ-RVTMSRWDASCLSNEQIRYACIDAY 187
R G + + +V+ +G V+ + MS W L++ Q+ A I++Y
Sbjct: 140 RMFVRDSRG-ARMCFCSFEQIVKERLGRVGVRLDPAICMSDWGVYNLNHYQVLQASIESY 198
Query: 188 VSFEV 192
V F++
Sbjct: 199 VCFKL 203
>AT3G12440.1 | chr3:3951199-3952260 REVERSE LENGTH=354
Length = 353
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 46 LIVGLDVEWRPSYGPAQN--PVALLQLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFV 103
L V +R PA++ P LQLCV RC+I QL Y + VP LRRFL FV
Sbjct: 195 LSVSPPARYRSVSPPARSDPPANTLQLCVGNRCIIIQLFYCNRVPHVLRRFLGDRNHTFV 254
Query: 104 GVGVDKDAERLS-DDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQ 162
G +DA +L H L +A DLR GR L + VV +G V+ +
Sbjct: 255 GFWNSQDAGKLKRSRHRLEIAELLDLRNHVVDSRGR-GLKGRSFEVVVGECLGYRGVRLE 313
Query: 163 R-VTMSRWDASCLSNEQIRYACIDAYVSFEVGRR 195
+ + MS W LS +QI A ID YV ++G R
Sbjct: 314 KAIGMSDWSVYDLSYDQILQASIDVYVCSKLGFR 347
>AT3G12420.1 | chr3:3948014-3948882 REVERSE LENGTH=186
Length = 185
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 65/155 (41%), Gaps = 41/155 (26%)
Query: 15 FGDAVITTTVTSSGAAVEGWLREV-----RAAYGPGLIVGLDVEWRPS------------ 57
FG+ ++ TVTS A + W+ EV R Y L+VG+ V+W P
Sbjct: 22 FGNT-LSVTVTSDFAIISQWIHEVEYNNCRPYYLQPLVVGVGVQWTPPVSYDANPPPDRY 80
Query: 58 ----------------------YGPAQNPVALLQLCVDRRCLIFQLLYADYVPGSLRRFL 95
+ P P LQLCV +CLI QL + D VP SLR FL
Sbjct: 81 YSDHHPPRSYDPNPPPNRYYSDHHPPHPPADTLQLCVGNQCLIIQLCHCDQVPTSLRSFL 140
Query: 96 AGAADCFVGVGVDKDAERLS-DDHGLTVANTADLR 129
FVGV +DA +L+ H L + D+R
Sbjct: 141 TDPNTTFVGVWNSQDAGKLARSKHQLEIGKLLDIR 175
>AT5G48350.1 | chr5:19593566-19594165 FORWARD LENGTH=200
Length = 199
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 17/195 (8%)
Query: 13 VAFGDAVITTTVTSSGAAVEGWLREVRAAYGP-GLIVGLDVEWRPSYGPAQNPVALLQLC 71
V G I TTVT + ++ + I+GLD E R G N LLQLC
Sbjct: 6 VKIGIDSIKTTVTEKERDINRLVKTFLSNKNNRKKIIGLDTE-RVQKGRKLNKTVLLQLC 64
Query: 72 VDRRCLIFQL---------LYADYVPGSLRRFLAGAADCFVGVGVDKDAERLSDDHGLTV 122
CLI QL D +P L FL FVG+G++K RL + GLT
Sbjct: 65 DGDNCLIVQLPDEDEDEGEGEDDNLPLPLFNFLNLPEFTFVGIGINKTMMRLESEFGLTC 124
Query: 123 ANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQRVTMSRWDASCLSNEQIRYA 182
N ++ P A L ++ + A++ + +P + W+ L+ QI+ A
Sbjct: 125 KNVVEIGP-ATWNLTN---MTTDVKFRISAIVSTE--RPSNAVLEDWEKFVLNKNQIKLA 178
Query: 183 CIDAYVSFEVGRRLL 197
+AY +F +G LL
Sbjct: 179 ASNAYFAFGIGNILL 193
>AT3G12430.1 | chr3:3949580-3950377 REVERSE LENGTH=239
Length = 238
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 36/206 (17%)
Query: 15 FGDAVITTTVTSSGAAVEGWLREV----RAAYGPGLIVGLDVEW--------------RP 56
FG+ I VT + + W+ +V R + P L+VG+ V+W R
Sbjct: 22 FGEEFIVI-VTPDPSVIGQWIHDVLSHNRFSSHP-LVVGVGVQWTPSSYYSASSPVRYRS 79
Query: 57 SYGPAQN-------------PVALLQLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFV 103
P + P LQLCV RC+I QL + + VP LR FLA FV
Sbjct: 80 DSPPVRYRSDSPRVRRRFDPPADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFV 139
Query: 104 GVGVDKDAERLS-DDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQ 162
G+ +DA +L H L +A DLR + GR + + + +V +G V+
Sbjct: 140 GIWNSQDAGKLKRSKHELEIAVLLDLRKFVSDSSGR-TMKRCSFEKIVEENLGHSGVRLD 198
Query: 163 R-VTMSRWDASCLSNEQIRYACIDAY 187
R V+ S W L QI A ID Y
Sbjct: 199 RKVSRSDWRVYDLRYVQILQASIDVY 224
>AT1G56310.1 | chr1:21082863-21085564 FORWARD LENGTH=590
Length = 589
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 47 IVGLDVEWRPSY--GPAQNPVALLQLCVDRRCLIFQL--LYAD---YVPGSLRRFLAGAA 99
+VG+D EW+P+Y G QN V+++Q+ D + I L LY D + L L +
Sbjct: 380 VVGIDCEWKPNYIKGSKQNKVSIMQIGSDTKIFILDLIKLYNDASEILDNCLSHILQSKS 439
Query: 100 DCFVGVGVDKDAERLSDDHG-LTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADL 158
+G D ++L+ +G L D+ P GL + + ++G L
Sbjct: 440 TLKLGYNFQCDIKQLALSYGDLKCFERYDMLLDIQNVFNEP---FGGLAGLTKKILGVSL 496
Query: 159 VKPQRVTMSRWDASCLSNEQIRYACIDAYVSFEVGRRL 196
K +R S W+ LS Q+ YA +DA V + R +
Sbjct: 497 NKTRR--NSDWEQRPLSQNQLEYAALDAAVLIHIFRHV 532
>AT3G11770.1 | chr3:3721490-3722092 REVERSE LENGTH=201
Length = 200
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 91 LRRFLAGAADCFVGVGVDKDAERLSDDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVV 150
L RF A FVGV + +D L ++HG+ + ++ ++ LAA+ G P + G + +
Sbjct: 95 LYRFFASKFVTFVGVQIQEDLALLKENHGIVIRSSLEIGKLAAKARGTPIVEFLGTRELA 154
Query: 151 RAVMGADLVKPQRVTMSRWDASCLSNEQIRYACIDAYVSFEVGRRL 196
++ D+ + + S+WD + SN+++ A I+ ++ F V +L
Sbjct: 155 HKILWYDMSRLDSI-QSKWDEAS-SNDRLEAAAIEGWLIFNVYDQL 198
>AT5G06450.1 | chr5:1967869-1968489 REVERSE LENGTH=207
Length = 206
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 68 LQLCVDRRCLIFQLL--YADYVPGSLRRFLAGAADCFVGVGVDKDAERLSDDHGLTVANT 125
++L CL +L + D + L RF A FVGV +++D + L ++HGL + N
Sbjct: 76 VKLSTRNLCLFLRLPKPFHDNLK-DLYRFFASKFVTFVGVQIEEDLDLLRENHGLVIRNA 134
Query: 126 ADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLVKPQRVTMSRWDASCLSNEQIRYACID 185
++ LAA+ G L G + + V+ +DL + + ++W+ + EQ+ A I+
Sbjct: 135 INVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQLDSIE-AKWEKAG-PEEQLEAAAIE 192
Query: 186 AYVSFEVGRRL 196
++ V +L
Sbjct: 193 GWLIVNVWDQL 203
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,002,954
Number of extensions: 148793
Number of successful extensions: 318
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 306
Number of HSP's successfully gapped: 12
Length of query: 199
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 106
Effective length of database: 8,556,881
Effective search space: 907029386
Effective search space used: 907029386
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 109 (46.6 bits)