BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0653800 Os01g0653800|AK111686
         (1377 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24710.1  | chr5:8459148-8467920 REVERSE LENGTH=1378          1748   0.0  

>AT5G24710.1 | chr5:8459148-8467920 REVERSE LENGTH=1378
          Length = 1377

 Score = 1748 bits (4528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 857/1179 (72%), Positives = 953/1179 (80%), Gaps = 15/1179 (1%)

Query: 1    MLRLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELKAGGVDERRLV 60
            MLR RAFR T+ K+VKIQ+HPTHPWLVTAD +D VSVW+WEHRQVIYELKAGGVDERRLV
Sbjct: 1    MLRARAFRQTNGKIVKIQVHPTHPWLVTADDSDHVSVWNWEHRQVIYELKAGGVDERRLV 60

Query: 61   GVKLEKLAEGDTDSKGKPTEAIRGGSVKQVSFYDDDVRFWQHWRNCSAAAEAPTAVNQQX 120
            G KLEKLAEG++D K KPTEAIRGGSVKQV FYDDDVR+WQ WRN SAAAE+P+AVN   
Sbjct: 61   GAKLEKLAEGESDYKAKPTEAIRGGSVKQVKFYDDDVRYWQLWRNRSAAAESPSAVNHLT 120

Query: 121  XXXXXXXXXTRGRHFVVICCENKVIFLDLVTMRGRDVPKQELDNKSLLCMEFLSRSSSSD 180
                     T+GRHF+VICCENK IFLDLVTMRGRDVPKQELDNKSLLCMEFLSRSS  D
Sbjct: 121  SAFTSPAPSTKGRHFLVICCENKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLSRSSGGD 180

Query: 181  APLVAFGSSDGVIRVLSMLTWKLVRRYTGGHKGAISCLMTFMSAAGEVHLVSGGSDGLLI 240
             PLVAFGS+DGVIRVLSM+TWKL RRYTGGHKG+I CLM FM+++GE  LVSGGSDGLL+
Sbjct: 181  GPLVAFGSTDGVIRVLSMITWKLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLLV 240

Query: 241  LWSADHIHDSRELVPKISLKAHDGGVVAVELSRVMGSAPQLITIGADKTLAIWDTVTFKE 300
            LWSADH  DSRELVPK+SLKAHDGGVVAVELSRV GSAPQLITIGADKTLAIWDT+TFKE
Sbjct: 241  LWSADHGADSRELVPKLSLKAHDGGVVAVELSRVSGSAPQLITIGADKTLAIWDTMTFKE 300

Query: 301  IRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELSSLVP 360
            +RRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIW+IEHPTYSALTRPLCELSSLVP
Sbjct: 301  LRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWSIEHPTYSALTRPLCELSSLVP 360

Query: 361  PQVLTQHKKLRVYCMVAHPLQPHLVATGTNIGIILSEFDXXXXXXXXXXXXXXESKEHSA 420
            PQVL  H+KLRVYCMVAHPLQPHLVATGTN+GII+SEFD               S+E+SA
Sbjct: 361  PQVLATHRKLRVYCMVAHPLQPHLVATGTNVGIIVSEFDPRAIPSAAPLPALPGSRENSA 420

Query: 421  VYIVERELKLLNFQLSNTANPSLGNAGVTSETGRSRNDPLEQLVVKQTKKHISTPAPHDS 480
            +YI+ RELKLLNFQLSNTANPSLGN    SE+G S+ DP EQL VKQTKK I  P PHDS
Sbjct: 421  IYILGRELKLLNFQLSNTANPSLGNNSALSESGLSKGDPGEQLTVKQTKKQIVAPVPHDS 480

Query: 481  YSILSVSSSGKYVAVIWPDIPSFAVYKASDWSVVDSGTGKLFAWDTCRDRYALVESALPP 540
            YS+LSVSSSGKYVAV+WPDI  F++YK SDWS+VDSG+ +L AWDTCRDR+A++ES LP 
Sbjct: 481  YSVLSVSSSGKYVAVVWPDILYFSIYKVSDWSIVDSGSARLLAWDTCRDRFAILESVLPH 540

Query: 541  RMPLIVKGGXXXXXXXXXXXXXXXXXXXXXXXXXXTVQVRILLDDGTAHVLQRSIDGRSE 600
            RMP+I KGG                          +VQVRILLDDGT+++L RS+ GRSE
Sbjct: 541  RMPIIPKGG-SSRKAKEAAAAAAQAAAAASAASSASVQVRILLDDGTSNILMRSVGGRSE 599

Query: 601  PVIGLHGGALLGVTYRTSRRISPVTATAISTVQSMPLXXXXXXXXXXXXX-----XXXXX 655
            PVIGLHGGALLG+ YRTSRRISPV ATAIST+QSMPL                       
Sbjct: 600  PVIGLHGGALLGIGYRTSRRISPVAATAISTIQSMPLSGFGNSNVSSFSSYDDGFSSQKS 659

Query: 656  KEGPPQNFQLYSWETYQPVSGLLAQPEWTVWDQTVEYCAFAYQQYIVISSLRPQFRYLGD 715
             E  P N+QLYSWE ++PV G+L QPEWT WDQTVEYCAFAYQQY+VISSLRPQ+RYLGD
Sbjct: 660  AESAPLNYQLYSWENFEPVGGMLPQPEWTAWDQTVEYCAFAYQQYMVISSLRPQYRYLGD 719

Query: 716  VSIPFATGAVWHRRQLFVATPTTIECVFVDAGVAAIDIXXXXXXXXXXXXXXQSRAAAEH 775
            V+I  ATGAVWHRRQLFVATPTTIECVFVDAGV+ IDI              Q+RA AEH
Sbjct: 720  VAIAHATGAVWHRRQLFVATPTTIECVFVDAGVSEIDIETRKMKEEMKLKEAQARAVAEH 779

Query: 776  GDLALITVEGPKTTTSEKIALRPPMLQVVRLASFQYAPSIPPFI-VPKQSKLDGEDSVFQ 834
            G+LALITVEG +    E+I+LRPPMLQVVRLASFQ APS+PPF+ +P+QS+ D +D    
Sbjct: 780  GELALITVEGSQAAKQERISLRPPMLQVVRLASFQNAPSVPPFLSLPRQSRGDSDDI--- 836

Query: 835  KELDDRRYAEXXXXXXXXXXXXTRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHALSL 894
              +D+RR  E            TRFP EQKRP+GPLVV GVRDGVLWL+DRYMCAHA+SL
Sbjct: 837  --MDERRVNEVAVGGGGVSVAVTRFPVEQKRPVGPLVVAGVRDGVLWLIDRYMCAHAISL 894

Query: 895  SHPGIRCRCLAAYGDPVSAVKWATRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFD 954
            +HPGIRCRCLAAYGD VSAVKWA+RLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFD
Sbjct: 895  NHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFD 954

Query: 955  LAMQSNDLKRALACLLTMSNSRDVGQETTATDVTQILNLAVAKQAKQESLADAVQGIVKF 1014
            LAMQSNDLKRAL CLLTMSNS+D+GQ+    D++ IL+L      K+E + +AV+GIVKF
Sbjct: 955  LAMQSNDLKRALHCLLTMSNSKDIGQDGVGLDLSDILSLTA---TKKEDVVEAVEGIVKF 1011

Query: 1015 VKEFFDLIDAADATGQADIAREVLKRLAAAASVKGALHGQMLRGLALRLANHGELTRLSG 1074
             KEF DLIDAADATG ADIARE LKRLA A SVKGAL G  LRGL+LRLANHGELTRLSG
Sbjct: 1012 AKEFLDLIDAADATGHADIAREALKRLATAGSVKGALQGHELRGLSLRLANHGELTRLSG 1071

Query: 1075 LVTNLIIAGHGREXXXXXXVLGDNALMEKAWQDTGMLAEAVLHSQAHGRPSLRNLVIAWN 1134
            LV NLI  G GRE      VLGDNALMEKAWQDTGMLAEAVLH+ AHGRP+L+NLV AWN
Sbjct: 1072 LVNNLISIGLGRESAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWN 1131

Query: 1135 KMLQKELDHTPTVKTDAAAAFLASLEDPKLTSLGETEKK 1173
            K LQKE++  P+ KTDAA+AFLASLEDPKLTSL +  +K
Sbjct: 1132 KTLQKEVEKAPSSKTDAASAFLASLEDPKLTSLSDASRK 1170



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 25,703,916
Number of extensions: 973898
Number of successful extensions: 2566
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2569
Number of HSP's successfully gapped: 1
Length of query: 1377
Length of database: 11,106,569
Length adjustment: 111
Effective length of query: 1266
Effective length of database: 8,063,393
Effective search space: 10208255538
Effective search space used: 10208255538
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)