BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0640200 Os01g0640200|Os01g0640200
(589 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54780.1 | chr3:20278985-20281429 FORWARD LENGTH=676 184 1e-46
AT5G60710.1 | chr5:24410953-24414849 REVERSE LENGTH=705 174 1e-43
AT1G08050.1 | chr1:2499088-2501311 REVERSE LENGTH=642 172 5e-43
AT2G38970.1 | chr2:16274135-16276651 FORWARD LENGTH=693 167 2e-41
AT5G49665.1 | chr5:20167119-20169420 REVERSE LENGTH=741 74 2e-13
AT5G65683.1 | chr5:26261472-26263704 FORWARD LENGTH=718 67 3e-11
AT2G22680.1 | chr2:9645433-9647484 FORWARD LENGTH=684 64 3e-10
AT4G37890.1 | chr4:17812812-17815031 REVERSE LENGTH=740 57 4e-08
>AT3G54780.1 | chr3:20278985-20281429 FORWARD LENGTH=676
Length = 675
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 210/420 (50%), Gaps = 20/420 (4%)
Query: 65 RAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATRLCPL-RFV 123
RA +DLV V+D+SGSM G ++ +K A+ FVI+ L DRL ++ F + A RL PL R
Sbjct: 239 RAPIDLVTVLDISGSMGGTKLALLKRAMGFVIQNLGSSDRLSVIAFSSTARRLFPLTRMS 298
Query: 124 TAAAQAELKALVDGLKAYGDTNMKGGLETGMSVVDGRSLAAGRAVSVMLMSDG----YQN 179
A Q L+A V+ L A G TN+ GL G V++ R L S++L+SDG N
Sbjct: 299 DAGRQLALQA-VNSLVANGGTNIVDGLRKGAKVMEDR-LERNSVASIILLSDGRDTYTTN 356
Query: 180 HGGDARDVHLKNVPVYTFSFGASHDSNLLEAIARKSLGGTFNYVADSANLTGPFSQLLGG 239
H + V L + V++F FG+ HD++++ +++ S GGTF+++ + + +Q +GG
Sbjct: 357 HPDPSYKVMLPQISVHSFGFGSDHDASVMHSVSEVS-GGTFSFIESESVIQDALAQCIGG 415
Query: 240 LLTIIAQDLELTVTRFHGEVTIKRVVWVDAGTYPQTTASDGSSVTVSFGTLYSAEARRVI 299
LL++ Q+L + + V R+ + AG+Y DG S V G LY+ E R +
Sbjct: 416 LLSVAVQELRVEIEGVSPNV---RLSSIKAGSYSSLVTGDGHSGLVDLGDLYADEERDFL 472
Query: 300 VYLAL-ADKTASPPYDANVCLAQYRFTFQAQQVTSNPDLITIKRRPSAAPGAARKPQPVE 358
V + + ++ P CL T +++T+ + RRP P V
Sbjct: 473 VSINIPVEEDGHTPLLKLRCLYINPLT---KEITTLESHVLQIRRPEYVAEEKVVPIEVV 529
Query: 359 NELARRQHADMIRAARDMAEANKMEDARNKLEEARKALEENFNQAANPTVAMLLE-ELRQ 417
+ R A+ + AR +AE +E A +E R L E + + L+ EL++
Sbjct: 530 RQRNRFLAAEAMAQARTLAEHGDLEAAVKAIENFRLVLAETVAAKSCDRFCVALDSELKE 589
Query: 418 LRGLMERQYLYNKEGRPYAASSLASHDRQRVATRGQ----ADGVRLYTTPHMDTYLKQAE 473
++G M ++Y GR Y S L+SH QR RG + V+ Y TP M L++++
Sbjct: 590 MQGRMRSSHMYEASGRAYILSGLSSHSWQRATARGNSRDSSSFVQAYQTPSMAEMLRRSQ 649
>AT5G60710.1 | chr5:24410953-24414849 REVERSE LENGTH=705
Length = 704
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 229/481 (47%), Gaps = 43/481 (8%)
Query: 3 YNDDEQTAPTSTATEPARPTVGITGQL-------VKQVRLNKYHNDVASMAPHDQXXXXX 55
+NDDE + E G+TG L + +V + D A +
Sbjct: 179 FNDDEALEHQDRSAESGLDKPGVTGTLEVKTYPEISEVVRSVSFKDFAVLINLKAPTSSK 238
Query: 56 XXXXXXXTDRAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNAT 115
+ RA +DLV V+DVSGSM G ++ +K A+ FVI+ L DRL +++F + A
Sbjct: 239 SSSNPSSSSRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSSTAR 298
Query: 116 RLCPLRFVTAAAQAELKALVDGLKAYGDTNMKGGLETGMSVVDGRSLAAGRAVSVMLMSD 175
R PLR +T + E V+ L + G TN+ GL+ G V+ R S++L+SD
Sbjct: 299 RNFPLRLMTETGKQEALQAVNSLVSNGGTNIAEGLKKGARVLIDRRF-KNPVSSIVLLSD 357
Query: 176 GYQNH---------GGD-----ARDVHLKNVPVYTFSFGASHDSNLLEAIARKSLGGTFN 221
G + G D ++++ +PV+ F FGA HD++L+ +IA S GGTF+
Sbjct: 358 GQDTYTMTSPNGSRGTDYKALLPKEINGNRIPVHAFGFGADHDASLMHSIAENS-GGTFS 416
Query: 222 YVADSANLTGPFSQLLGGLLTIIAQDLELTVTRFHGEVTIKRVVWVDAGTYPQTTASDGS 281
++ + F+Q +GGLL+++ Q+L +T+ H + R+ V AG+Y +
Sbjct: 417 FIESETVIQDAFAQCIGGLLSVVVQELCVTIECMH---HLLRIGSVKAGSYRFDNGPNSR 473
Query: 282 SVTVSFGTLYSAEARRVIVYL--ALADKTASPPYDANV-CLAQYRFTFQAQQVTSNPD-- 336
+ +++ G LY+ E R +V L + D + V C+ + T + + ++ +
Sbjct: 474 TGSIAVGDLYAEEERNFLVNLDIPIVDGVSDVMSLLKVQCVYKDPVTKETVNLNNSGEVK 533
Query: 337 ----LITIKRRPSAAPGAARKPQPVENELARRQHADMIRAARDMAEANKMEDARNKLEEA 392
++ +RRP + V+ + R + A+ I AR +AE + +A + LE
Sbjct: 534 ILRPIVMTERRPVVS-------VEVDRQRIRLRAAEAISEARVLAERGDLTEAVSVLETC 586
Query: 393 RKALEENFN-QAANPTVAMLLEELRQLRGLMERQYLYNKEGRPYAASSLASHDRQRVATR 451
R L E+ + +A + L EL++++ M + +Y GR Y + L+SH QR R
Sbjct: 587 RGLLTESVSGRAGDQLCVTLCAELKEMQERMASRQVYEASGRAYVLAGLSSHSWQRATAR 646
Query: 452 G 452
G
Sbjct: 647 G 647
>AT1G08050.1 | chr1:2499088-2501311 REVERSE LENGTH=642
Length = 641
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 211/442 (47%), Gaps = 25/442 (5%)
Query: 65 RAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATRLCPLRFVT 124
RA LDL+ V+DVSGSMDG +++ +K A+ FVI+ L + DRL +++F + A RL PLR ++
Sbjct: 200 RAPLDLITVLDVSGSMDGVKMELMKNAMSFVIQNLGETDRLSVISFSSMARRLFPLRLMS 259
Query: 125 AAAQAELKALVDGLKAYGDTNMKGGLETGMSVVDGRSLAAGRAVSVMLMSDGYQNHGGDA 184
+ V+ L A G TN+ GL+ G V++GR +ML+SDG N
Sbjct: 260 ETGKQAAMQAVNSLVADGGTNIAEGLKIGARVIEGRRW-KNPVSGMMLLSDGQDNFTFSH 318
Query: 185 RDVHLKN-----------VPVYTFSFGASHDSNLLEAIARKSLGGTFNYVADSANLTGPF 233
V L+ +P++TF FG+ HD+ L+ I+ S GTF+++ + F
Sbjct: 319 AGVRLRTDYESLLPSSCRIPIHTFGFGSDHDAELMHTISEVS-SGTFSFIETETVIQDAF 377
Query: 234 SQLLGGLLTIIAQDLELTVTRFHGEVTIKRVVWVDAGTYPQTTASDGSSVTVSFGTLYSA 293
+Q +GGLL+++ + + + H E +K + + AG+Y A D + T+ G +Y+
Sbjct: 378 AQCIGGLLSVVILEQVVEIECIH-EQGLK-ISSIKAGSYRSRIAPDARTATIDVGDMYAE 435
Query: 294 EARRVIVYLALADKTASPPYDANVCLAQYRFTFQ----AQQVTSNPDLITIKRRPSAAPG 349
E R +V L + ++ L + R ++ + V ++I+ RP G
Sbjct: 436 EERDFLVLLEIPCCDNGSGESESLSLLKVRCVYKDPVTKEIVHVESGELSIQ-RPMKLTG 494
Query: 350 AARKPQPVENELARRQHADMIRAARDMAEANKMEDARNKLEEARKALEENFN-QAANPTV 408
V+ +L R + + AR +A+ + A L + L E + Q+++
Sbjct: 495 KEVVSIEVDRQLNRFLVSQAMSEARVLADGGDLSGAVGILRNRERELSETPSAQSSDRLC 554
Query: 409 AMLLEELRQLRGLMERQYLYNKEGRPYAASSLASHDRQRVATRGQA----DGVRLYTTPH 464
L EL L+ M + +Y GR YA SS++SH QR RG + V+ Y T
Sbjct: 555 QSLSSELSALQERMTSRRMYRTSGRAYAFSSMSSHSAQRATARGDSTQGFSPVQAYQTSP 614
Query: 465 MDTYLKQAEQFEKNPDEAPPPA 486
M + +++ P P
Sbjct: 615 MARMVTRSQLLVLESPTKPSPG 636
>AT2G38970.1 | chr2:16274135-16276651 FORWARD LENGTH=693
Length = 692
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 212/433 (48%), Gaps = 33/433 (7%)
Query: 65 RAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATRLCPLRFVT 124
RA +DLV V+D+SGSM G ++ +K A+ FVI+ L DRL ++ F + A RL PL ++
Sbjct: 249 RAPVDLVTVLDISGSMAGTKLALLKRAMGFVIQNLGSNDRLSVIAFSSTARRLFPLTKMS 308
Query: 125 AAAQAELKALVDGLKAYGDTNMKGGLETGMSVVDGRSLAAGRAVSVMLMSDGYQNHGGDA 184
A + V+ + A G TN+ GL G+ V++ R S++L+SDG + +
Sbjct: 309 DAGRQRALQAVNSVVANGGTNIAEGLRKGVKVMEDRR-DKNPVASIILLSDGRDTYTMNQ 367
Query: 185 RDVHLK---------------NVPVYTFSFGASHDSNLLEAIARKSLGGTFNYVADSANL 229
D + K +PV++F FG+ HD++L+ +++ S GGTF+++ + +
Sbjct: 368 ADPNYKLLLPLSMHGCESKRFQIPVHSFGFGSDHDASLMHSVSETS-GGTFSFIESESVI 426
Query: 230 TGPFSQLLGGLLTIIAQDLELTVTRFHGEVTIKRVVWVDAGTYPQTTASDGSSVTVSFGT 289
+Q +GGLL++ Q+L L + +V + + AG+Y + DG S V G
Sbjct: 427 QDALAQCIGGLLSVAVQELRLEIEGMCSDVHLSS---IKAGSYQSLVSGDGRSGCVDIGD 483
Query: 290 LYSAEARRVIVYLAL---ADKTASPPYDANVCLAQYRFTFQAQQVTSNPDLITIKRRPSA 346
LY+ E R ++ + + D +P C+ Y+ + VT ++ I+ RP
Sbjct: 484 LYADEERDFLISVNIPPQKDGNETPLLKMR-CV--YKDLLTKEIVTLQSHMLKIQ-RPET 539
Query: 347 APGAARKPQPVENELARRQHADMIRAARDMAEANKMEDARNKLEEARKALEENFNQAANP 406
V+ + R A+ + AR +AE + ++ R AL E + +
Sbjct: 540 VGQEVVVSIEVDRQRNRFLAAEAMVKARALAEREDLAAGVTAIQNFRVALAETVSAKSGD 599
Query: 407 TVAMLLE-ELRQLRGLMERQYLYNKEGRPYAASSLASHDRQRVATRGQA-DGVRL----Y 460
+ L+ EL++++ M +++Y GR Y S L+SH QR +RG++ DG Y
Sbjct: 600 GFCVALDRELKEMQERMASRHVYEVSGRAYILSGLSSHSWQRATSRGESGDGSSFVQAYY 659
Query: 461 TTPHMDTYLKQAE 473
TP M L +++
Sbjct: 660 QTPSMVEMLHRSQ 672
>AT5G49665.1 | chr5:20167119-20169420 REVERSE LENGTH=741
Length = 740
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 41/241 (17%)
Query: 78 GSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFC-TNATRLCPLRFVTAAAQAELKALVD 136
G+M+G ++ VK A++ VI L DRL IV T RL PL+ +T + A+VD
Sbjct: 341 GTMNGAKLQMVKRAMRLVISSLGSADRLSIVAVVMTVPKRLLPLKRMTEHGKRSAGAVVD 400
Query: 137 GLKAYGDTNMKGGLETGMSVVDGRSLAAGRAVSVMLMSDGYQ-------------NHGGD 183
GL +N L+ V++ R S++L++DG + G
Sbjct: 401 GLLCGQGSNTSEALKKASRVLEDRR-ERNPVASIVLLTDGQGQLSKVHTNQRSTITNVGS 459
Query: 184 ARDVHLKNVPVYTFSFGASHDSNLLEAIARKSLGGTFNYVADSANLTGPFSQLLGGLLTI 243
R H++ +PV FG S GG N A+ A F++ +GGLL++
Sbjct: 460 TRFAHIE-IPVTEHGFGES--------------GGCSNAPAEEA-----FAKCIGGLLSV 499
Query: 244 IAQDL--ELTVTRFHGEVTIKRVVWVDAGTYPQTTASDGSSVTVSFGTLYSAEARRVIVY 301
+ QDL ++ V G I + + T S GS +V G LY+ E R ++V
Sbjct: 500 VVQDLRIQIRVGSGSGPCEISAIYLCNGRP---TLVSSGSG-SVRLGDLYAGEERELLVE 555
Query: 302 L 302
L
Sbjct: 556 L 556
>AT5G65683.1 | chr5:26261472-26263704 FORWARD LENGTH=718
Length = 717
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 35/255 (13%)
Query: 65 RAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATRLCPLRFVT 124
R +DLV V+D+S G + VK A++ VI L ++DRL IV F T + RL PLR +T
Sbjct: 322 RPSIDLVTVLDLSNG--GANLQTVKHAMRSVISLLREMDRLSIVVFSTGSKRLMPLRRMT 379
Query: 125 AAAQAELKALVDGLKAYGDTNMKGGLET----GMSVVDGRSLAA---------GRAVSVM 171
A + + +VD L GG+ET GMSV D A + S+
Sbjct: 380 AKGRRSARRMVDAL---------GGMETTGGVGMSVNDALKKAVKVVEDRREKNPSTSIF 430
Query: 172 LMSDGY-QNHGGDARDVHLKNVPVYTFSFGASHDSNLLEAIARKSLGGTFNYVADSANLT 230
++SDG Q ++ +P + S + ++ S G + A L
Sbjct: 431 VLSDGQDQPEAVLKAKLNATRIPFVVSTTRFSRPEIPVHSVYIASPGALLH-----APLR 485
Query: 231 GPFSQLLGGLLTIIAQDLELTVTRFHGE-VTIKRVVWVDAGTYPQTTASDGSSVTVSFGT 289
F++ + LL + +++L ++ +G +T V+ G + GS + G
Sbjct: 486 DAFTERIASLLNVTLHNVKLNLSLVNGSHLTEISSVYSLTGRL----ENFGSGSVIQVGD 541
Query: 290 LYSAEARRVIVYLAL 304
L++ E R +V L +
Sbjct: 542 LFAEEEREFLVELKV 556
>AT2G22680.1 | chr2:9645433-9647484 FORWARD LENGTH=684
Length = 683
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 65 RAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATRLCPLRFVT 124
R +DLVAV+DVSG G +++ +K ++ V+ L ++DRL I+ F +++ RL PLR +T
Sbjct: 298 RVPVDLVAVLDVSGRNSGGKLEMLKQTMRIVLSNLREMDRLSIIAFSSSSKRLSPLRRMT 357
Query: 125 AAAQAELKALVDGLKAYGDTNMKG--GLETGMSVVDGRSLAAGRAVSVM 171
A + + +VD + G + G GMSV D A +AV V+
Sbjct: 358 ANGRRSARRIVDIITVPGSVSGVGIDFSGEGMSVND----ALKKAVKVL 402
>AT4G37890.1 | chr4:17812812-17815031 REVERSE LENGTH=740
Length = 739
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 78/267 (29%)
Query: 65 RAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATRLCPLRFVT 124
R+ +DLV VIDVSG I+ VK A++ VI L + DRL +V+F +++ RL PLR +T
Sbjct: 353 RSPVDLVTVIDVSGG----NIEMVKRAMRQVISSLRETDRLSMVSFSSSSKRLTPLRRMT 408
Query: 125 AAAQAELKALVDGLKAYGDTNMKGGLETGMSVVDGRSLAA---------GRAVSVMLMSD 175
A + + +VD + GD GMSV D AA ++ +++D
Sbjct: 409 ANGRRLARRIVDDISGDGD---------GMSVNDAVKKAAKVIEDRRQKNLFTTIFVLTD 459
Query: 176 GYQNHGGDA-----------RDVHLKNVPVYTFSFGASHDSNLLEAIARKSLGGTFNYVA 224
+N A R HL+ +P +T GA + + L E +
Sbjct: 460 RNRNSAHQAQLAQPDFVTSTRFSHLE-IPTHTIWLGACNHA-LPEDV------------- 504
Query: 225 DSANLTGPFSQLLGGLLTIIAQDLELTVTRFHGEVTIK---------RVVWVDAGTYPQT 275
F++ + LL++ QDL L + G K R VW+ +G
Sbjct: 505 --------FAKRIKSLLSLSVQDLTLNLGLVSGSGQGKVTSVYSLSGRPVWLGSG----- 551
Query: 276 TASDGSSVTVSFGTLYSAEARRVIVYL 302
+ G +Y E R V+V L
Sbjct: 552 --------LIRLGDMYGDEEREVLVEL 570
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,805,145
Number of extensions: 397366
Number of successful extensions: 1139
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1119
Number of HSP's successfully gapped: 8
Length of query: 589
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 485
Effective length of database: 8,255,305
Effective search space: 4003822925
Effective search space used: 4003822925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)