BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0616900 Os01g0616900|003-129-E09
         (124 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12670.1  | chr3:4020351-4024086 REVERSE LENGTH=592            167   9e-43
AT1G30820.1  | chr1:10945251-10948825 REVERSE LENGTH=601          161   7e-41
AT4G20320.1  | chr4:10974980-10978998 FORWARD LENGTH=598          156   2e-39
AT4G02120.1  | chr4:940873-944097 FORWARD LENGTH=557              133   2e-32
AT2G34890.1  | chr2:14718195-14721271 REVERSE LENGTH=598          133   3e-32

>AT3G12670.1 | chr3:4020351-4024086 REVERSE LENGTH=592
          Length = 591

 Score =  167 bits (424), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 80/102 (78%), Positives = 82/102 (80%)

Query: 1   MPFIEALGQFSYRVGPGNFCXXXXXXXXXXXXXGEQKTKPTQHSVRGLRGLGLTPNILAC 60
           MPFIEALGQFSY+VGPGNFC             GEQKTKPTQHSVRGLR LGLTPNILAC
Sbjct: 157 MPFIEALGQFSYKVGPGNFCLVHVSLVPVLSVVGEQKTKPTQHSVRGLRSLGLTPNILAC 216

Query: 61  RSTKELEENVKEKLSQFCHVPAANIVTLYDVSNIWRIPLLLR 102
           RSTK LEENVK KLSQFCHVP  NIVTLYDV NIW +PLLLR
Sbjct: 217 RSTKALEENVKTKLSQFCHVPEVNIVTLYDVPNIWHVPLLLR 258



>AT1G30820.1 | chr1:10945251-10948825 REVERSE LENGTH=601
          Length = 600

 Score =  161 bits (408), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 78/107 (72%), Positives = 84/107 (78%)

Query: 2   PFIEALGQFSYRVGPGNFCXXXXXXXXXXXXXGEQKTKPTQHSVRGLRGLGLTPNILACR 61
           PFIEALGQFSYRVGPGNFC             GEQKTKPTQHSV+GLRGLGLTP+ILACR
Sbjct: 158 PFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVKGLRGLGLTPDILACR 217

Query: 62  STKELEENVKEKLSQFCHVPAANIVTLYDVSNIWRIPLLLRVRHISL 108
           STK LE+NVKEKL+QFCHVP   I TLYDV NIWRIPLLL+ +   L
Sbjct: 218 STKPLEDNVKEKLAQFCHVPLEYIFTLYDVPNIWRIPLLLKDQKAHL 264



>AT4G20320.1 | chr4:10974980-10978998 FORWARD LENGTH=598
          Length = 597

 Score =  156 bits (395), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 75/102 (73%), Positives = 79/102 (77%)

Query: 1   MPFIEALGQFSYRVGPGNFCXXXXXXXXXXXXXGEQKTKPTQHSVRGLRGLGLTPNILAC 60
           MPFIEALGQFSYRVG  NFC             GEQKTKPTQHSVR LRGLGL+PNILAC
Sbjct: 157 MPFIEALGQFSYRVGTDNFCLIHVSLVPVLNVVGEQKTKPTQHSVRDLRGLGLSPNILAC 216

Query: 61  RSTKELEENVKEKLSQFCHVPAANIVTLYDVSNIWRIPLLLR 102
           RSTK LE+NVK KLSQFCHVP  N+VTLYD  NIW IPLLL+
Sbjct: 217 RSTKPLEDNVKAKLSQFCHVPMENVVTLYDCPNIWHIPLLLK 258



>AT4G02120.1 | chr4:940873-944097 FORWARD LENGTH=557
          Length = 556

 Score =  133 bits (335), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 73/102 (71%)

Query: 1   MPFIEALGQFSYRVGPGNFCXXXXXXXXXXXXXGEQKTKPTQHSVRGLRGLGLTPNILAC 60
           MPFIEAL Q S+ VGP NFC             GEQKTKPTQH+VR LR LGLTP+ LAC
Sbjct: 157 MPFIEALRQLSFSVGPDNFCLIHVSLIPVLGVVGEQKTKPTQHTVRELRALGLTPHFLAC 216

Query: 61  RSTKELEENVKEKLSQFCHVPAANIVTLYDVSNIWRIPLLLR 102
           RS + L E+ K KLSQFCHV AANI+ ++DV NIW +PLLLR
Sbjct: 217 RSAQPLLESTKAKLSQFCHVAAANILNIHDVPNIWHVPLLLR 258



>AT2G34890.1 | chr2:14718195-14721271 REVERSE LENGTH=598
          Length = 597

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 72/101 (71%)

Query: 2   PFIEALGQFSYRVGPGNFCXXXXXXXXXXXXXGEQKTKPTQHSVRGLRGLGLTPNILACR 61
           PF +AL Q SY VG  NFC             GEQKTKPTQHS++ LRG GLTPNI+ACR
Sbjct: 158 PFADALSQLSYSVGRENFCLIHVTLVPVLSVVGEQKTKPTQHSIKDLRGFGLTPNIIACR 217

Query: 62  STKELEENVKEKLSQFCHVPAANIVTLYDVSNIWRIPLLLR 102
           STK LEENVK KLS+FC+VP  NI +L DV NIW IPLLL+
Sbjct: 218 STKALEENVKAKLSRFCYVPIQNIFSLCDVPNIWHIPLLLK 258



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.142    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,433,933
Number of extensions: 82873
Number of successful extensions: 238
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 238
Number of HSP's successfully gapped: 5
Length of query: 124
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 38
Effective length of database: 8,748,793
Effective search space: 332454134
Effective search space used: 332454134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 105 (45.1 bits)