BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0612600 Os01g0612600|AK066561
(326 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68140.1 | chr1:25539410-25540414 REVERSE LENGTH=335 163 1e-40
AT4G08460.1 | chr4:5377378-5378202 REVERSE LENGTH=275 147 1e-35
AT1G15430.1 | chr1:5305011-5305790 FORWARD LENGTH=260 141 4e-34
AT4G31410.1 | chr4:15244259-15245474 FORWARD LENGTH=309 137 6e-33
AT1G80220.1 | chr1:30167839-30168606 FORWARD LENGTH=256 133 2e-31
AT1G77770.1 | chr1:29246380-29247275 REVERSE LENGTH=266 130 1e-30
AT3G25910.1 | chr3:9489836-9490954 FORWARD LENGTH=373 114 9e-26
AT3G24740.1 | chr3:9032397-9033461 FORWARD LENGTH=355 104 6e-23
AT2G26050.1 | chr2:11098652-11099380 REVERSE LENGTH=222 103 1e-22
>AT1G68140.1 | chr1:25539410-25540414 REVERSE LENGTH=335
Length = 334
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 13/211 (6%)
Query: 5 RSTRAVSYERRRSRVSPY--PSNGKGCARRSEESXXXXXXXXXXXXXEWEDVRCPVCMDH 62
++ R V R R+R PY PS+ + AR + +WE+V C VCM+
Sbjct: 6 KAGRRVPSRRFRARAKPYKFPSSKRLVAR----NMFAEDCSKCLEKRDWENVICSVCMEC 61
Query: 63 PHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXXXXXXXXXXXXCQQ 122
PHNAVLL+CSSH+KGCRP+MC TS+R+SNC DQY+
Sbjct: 62 PHNAVLLLCSSHDKGCRPYMCGTSFRYSNCLDQYKKASAKLKTSGHQQINKSELG----- 116
Query: 123 PIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPTVRP 182
L+CPLCRG V WT AR +LN+K R C +E+C + G + +LR+H + +HP+ +P
Sbjct: 117 --NLTCPLCRGQVKGWTIVQPARDFLNLKKRICMQENCVYAGTFKELRKHMKVDHPSAKP 174
Query: 183 TQVDPERQRDWHRMEQQRDLGDLFSMLRSGL 213
+VDP+ +++W R+E + D D+ S +RS +
Sbjct: 175 REVDPDVEQNWRRLEIEHDRDDVMSTIRSTM 205
>AT4G08460.1 | chr4:5377378-5378202 REVERSE LENGTH=275
Length = 274
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 14/161 (8%)
Query: 51 WEDVRCPVCMDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXXX 110
W V CPVC++ PHN+V+L+CSS+ KGCRP+MC T R SNC +QY+
Sbjct: 44 WTGVTCPVCLEVPHNSVVLLCSSYHKGCRPYMCATGNRFSNCLEQYKKAYAKDEKS---- 99
Query: 111 XXXXXXXXXCQQPIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLR 170
+P +L CPLCRG V WT RKYLN K R+C + C F G+Y QL+
Sbjct: 100 ----------DKPPELLCPLCRGQVKGWTVVEKERKYLNSKKRSCMNDECLFYGSYRQLK 149
Query: 171 RHARENHPTVRPTQVDPERQRDWHRMEQQRDLGDLFSMLRS 211
+H +ENHP +P +DP + W ++E +R+ D+ S + S
Sbjct: 150 KHVKENHPRAKPRAIDPVLEAKWKKLEVERERSDVISTVMS 190
>AT1G15430.1 | chr1:5305011-5305790 FORWARD LENGTH=260
Length = 259
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 107/208 (51%), Gaps = 21/208 (10%)
Query: 1 MPKDRSTRAVSYERRRSRVSPYPSNGKGC-ARRSEESXXXXXXXXXXXXXEWEDVRCPVC 59
M K+R VS R+RVSPYP + C ++ +E EWEDVRC +C
Sbjct: 1 MHKERGKMPVS--SNRNRVSPYPL--RSCRNKKQKEVEASSSPVELESVSEWEDVRCVIC 56
Query: 60 MDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXXXXXXXXXXXX 119
M+ PHNAVLL CSS KGCR +MCDTS RHSNCF QYR
Sbjct: 57 MEPPHNAVLLQCSSFSKGCRAYMCDTSARHSNCFKQYRRSNSSSRCSGKT---------- 106
Query: 120 CQQPIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPT 179
L CP CRG V K AR+++N + R CT + C+F G Y QL+ H + HP
Sbjct: 107 ------LHCPYCRGEVQGTMKSTCARRFMNARPRCCTVDKCDFSGTYAQLKNHLKTEHPG 160
Query: 180 VRPTQVDPERQRDWHRMEQQRDLGDLFS 207
P ++DP Q W ++E++ + ++ +
Sbjct: 161 FTPPKLDPWEQHMWEQLEREAEYIEMLN 188
>AT4G31410.1 | chr4:15244259-15245474 FORWARD LENGTH=309
Length = 308
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Query: 51 WEDVRCPVCMDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXXX 110
W+D+ CP+C+D PHN VLL CSS+ GCR F+C+T + HSNC D++
Sbjct: 29 WDDLTCPICLDFPHNGVLLQCSSYGNGCRAFVCNTDHLHSNCLDRFISACGTESPPAPDE 88
Query: 111 XXXXXXXXXCQQPIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLR 170
C+ P+ CPLCRG V+ W +AR L+ K R C +E C F G Y +LR
Sbjct: 89 PRSKVLEESCK-PV---CPLCRGEVTGWLVVEEARLRLDEKKRCCEEERCRFMGTYLELR 144
Query: 171 RHARENHPTVRPTQVDPERQRDWHRMEQQRDLGDLFSMLRS 211
+HA+ HP RP+++DP R+ DW +Q ++ D+ S + S
Sbjct: 145 KHAQSEHPDSRPSEIDPARKLDWENFQQSSEIIDVLSTIHS 185
>AT1G80220.1 | chr1:30167839-30168606 FORWARD LENGTH=256
Length = 255
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 8 RAVSYERRRSRVSPYPSNGKGCARRSEESXXXXXXXXXXXXXEWEDVRCPVCMDHPHNAV 67
R V + RVSPYP RS + WEDVRC +CM+ PH AV
Sbjct: 6 RIVCESSNKIRVSPYP-------LRSTRTNKLKAIESPIDESNWEDVRCMICMEPPHEAV 58
Query: 68 LLVCSSHEKGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXXXXXXXXXXXXCQQPIKLS 127
LL CSS GCRP+MC TS+RHSNCF Q+ L
Sbjct: 59 LLTCSSSLNGCRPYMCGTSFRHSNCFKQFCRNNRKKRSNTKT----------------LH 102
Query: 128 CPLCRGPVSHWTK-DYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPTVRPTQVD 186
CPLCRG V K AR+++N K R+C + CEF G Y L +H + H + P +VD
Sbjct: 103 CPLCRGEVLETKKASKTARRFMNAKPRSCPVDGCEFSGTYAHLNKHLKTEHQGLVPAKVD 162
Query: 187 PERQRDWHRMEQQRDLGDLFS 207
P+RQ W + + + +L S
Sbjct: 163 PQRQSRWEMLVRHAEYVNLMS 183
>AT1G77770.1 | chr1:29246380-29247275 REVERSE LENGTH=266
Length = 265
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 93/162 (57%), Gaps = 16/162 (9%)
Query: 50 EWEDVRCPVCMDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXX 109
EW CPVC++ PHNAVLL+CSS+ KGCRP+MC TS R +NC DQYR
Sbjct: 25 EWAGSTCPVCLESPHNAVLLLCSSYHKGCRPYMCATSSRFANCLDQYRKSYGNENSG--- 81
Query: 110 XXXXXXXXXXCQQPIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQL 169
QP +L CPLCRG V WT DAR + N K R C +++C F G + +L
Sbjct: 82 ------------QP-ELLCPLCRGQVKGWTVVKDARMHFNSKRRTCMQDNCSFLGNFRKL 128
Query: 170 RRHARENHPTVRPTQVDPERQRDWHRMEQQRDLGDLFSMLRS 211
++H +E HP P +DP + W R+E++RD D+ S + S
Sbjct: 129 KKHMKEKHPHACPRAIDPALETKWKRLERERDRRDVISTIMS 170
>AT3G25910.1 | chr3:9489836-9490954 FORWARD LENGTH=373
Length = 372
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 121 QQPIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPTV 180
+P KL+CPLCRG + W AR ++N K R+C+ E+C+F G+Y LR+HAR HP V
Sbjct: 169 NKPQKLTCPLCRGHIKEWVVVKAARCFMNSKHRSCSCETCDFSGSYSDLRKHARLLHPGV 228
Query: 181 RPTQVDPERQRDWHRMEQQRDLGDLFSMLRSGLSAREDGIGVSEGEEDISERALHSPSIT 240
RP++ DPERQR W R+E+Q DLGDL S L+S D I +G R L T
Sbjct: 229 RPSEADPERQRSWRRLERQSDLGDLLSTLQSSFGG--DEISNDDGFLFADTRLL-----T 281
Query: 241 MVFIVRTGR 249
+ F++R R
Sbjct: 282 VYFLIRVFR 290
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Query: 1 MPKDRSTRAVSYERRRSRVSPYPSNGKGCARRSEESXXXXXXXXXXXXXEWEDVRCPVCM 60
MPK+R R+VS ++ + SP + SE+ EWE+ RCPVCM
Sbjct: 1 MPKERKERSVSLDKYKR--SPLCCEASLALKPSEK-----------QVKEWEEARCPVCM 47
Query: 61 DHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYR 97
+HPHN +LL+CSS+E GCRP+MCDTS+RHSNCFDQ+R
Sbjct: 48 EHPHNGILLICSSYENGCRPYMCDTSHRHSNCFDQFR 84
>AT3G24740.1 | chr3:9032397-9033461 FORWARD LENGTH=355
Length = 354
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 124 IKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPTVRPT 183
L CPLCRG V W + R YL+ K R+C++ESC F G Y LRRHAR HPT RP+
Sbjct: 136 TNLKCPLCRGTVLGWKVVEEVRTYLDHKNRSCSRESCSFTGNYQDLRRHARRTHPTTRPS 195
Query: 184 QVDPERQRDWHRMEQQRDLGDLFSMLRSGLSAREDGIGVSEGEEDISERALHSPSITMV- 242
DP R+R W R+E QR+ GD+ S +RS + P +V
Sbjct: 196 DTDPSRERAWRRLENQREYGDIVSAIRSAM-----------------------PGAVVVG 232
Query: 243 -FIVRTGRSILHYREAFPGHHRRRTILLLGEAFG 275
+++ G RE G T LLL + G
Sbjct: 233 DYVIENGDRFAGERETGNGGSDLWTTLLLFQMIG 266
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 50 EWEDVRCPVCMDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYR 97
E ++V CPVCMDHPHNAVLL+CSSH+KGCR ++CDTSYRHSNC D+++
Sbjct: 20 ELDEVSCPVCMDHPHNAVLLLCSSHDKGCRSYICDTSYRHSNCLDRFK 67
>AT2G26050.1 | chr2:11098652-11099380 REVERSE LENGTH=222
Length = 221
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 75/140 (53%), Gaps = 19/140 (13%)
Query: 76 KGCRPFMCDTSYRHSNCFDQYRXXXXXXXXXXXXXXXXXXXXXXCQQPIKLSCPLCRGPV 135
+GC P+MCDTS RHSNCF Q+R P L CPLCRG V
Sbjct: 38 RGCHPYMCDTSVRHSNCFKQFRRKTIKKRLY----------------PKTLHCPLCRGEV 81
Query: 136 SHWTK-DYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPTVRPTQVDPERQRDWH 194
S TK AR+++N K R+C+ E C+F G + QL +H + H + P +VDP RQ+ W
Sbjct: 82 SETTKVTSTARRFMNAKPRSCSVEDCKFSGTFSQLTKHLKTEHRGIVPPKVDPLRQQRWE 141
Query: 195 RMEQQRDLGDLFSMLRSGLS 214
ME+ + +L M +G+S
Sbjct: 142 MMERHSEYVEL--MTAAGIS 159
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,626,998
Number of extensions: 244568
Number of successful extensions: 646
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 639
Number of HSP's successfully gapped: 13
Length of query: 326
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 227
Effective length of database: 8,392,385
Effective search space: 1905071395
Effective search space used: 1905071395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)