BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0595900 Os01g0595900|AK100625
(543 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13570.1 | chr1:4642528-4643930 REVERSE LENGTH=417 60 3e-09
AT3G03360.1 | chr3:795218-796918 FORWARD LENGTH=482 59 7e-09
AT5G41840.1 | chr5:16754436-16756263 REVERSE LENGTH=541 56 6e-08
AT3G28410.1 | chr3:10640152-10642071 REVERSE LENGTH=466 55 8e-08
AT5G22700.1 | chr5:7545653-7547307 REVERSE LENGTH=438 53 4e-07
AT5G22660.2 | chr5:7536328-7537853 REVERSE LENGTH=451 53 5e-07
AT5G02700.1 | chr5:609381-611679 REVERSE LENGTH=457 52 1e-06
AT5G22610.1 | chr5:7515217-7516916 FORWARD LENGTH=473 51 1e-06
AT2G39415.1 | chr2:16458607-16458966 REVERSE LENGTH=120 51 1e-06
AT2G04230.1 | chr2:1447025-1448678 REVERSE LENGTH=449 49 9e-06
>AT1G13570.1 | chr1:4642528-4643930 REVERSE LENGTH=417
Length = 416
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWASTXXXXXXXXXXXXXXXXXRRG 148
D IS LP +++ NI++RL RDA RT+VLS++WR W++ +
Sbjct: 6 DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWST-----------LTDLVFDEKC 54
Query: 149 HSHRVDLAAAASRVTRVLTS----HRGPYLCVHLTCCNMATHWPMLSYWLSLLAANGVQD 204
S D + + R +T H+GP L+ + P + WL L+ NG+++
Sbjct: 55 VSPSNDRCVVETNLVRFITGVLLLHQGPIHKFQLS-TSFKQCRPDIDQWLLFLSRNGIKE 113
Query: 205 LVFANRPYPLDLPLPVDILRIPSLRSLYLAFWTFPGIPGGARGPHVFPHLRELGLCFISI 264
LV + + +P + L L L F P +G F +L+ L L I +
Sbjct: 114 LVL--KLGEGEFRVPACLFNCLKLTCLELCHCEFDP-PQYFKG---FSYLKSLNLHQILV 167
Query: 265 DAQDLDGLLQCSPVLETLAL 284
+ ++ L+ P+LE L+L
Sbjct: 168 APEVIESLISGCPLLEFLSL 187
>AT3G03360.1 | chr3:795218-796918 FORWARD LENGTH=482
Length = 481
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 33/206 (16%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWASTXXXXXXXXXXXXXXXXXRRG 148
D ISRLP +L I+S LP R A +T+VLS RWR VW+ T
Sbjct: 37 DLISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSF--------------- 81
Query: 149 HSHRVDLAAAASRVTRVLTSHRGPYLCVH--LTCCNMA------THWPMLSYWLSLLAAN 200
H R D A + R+L +R P + +CC A TH + S W++ +
Sbjct: 82 HRDRPD----APCINRILDRYRAPKMMSFRICSCCRAACISRPDTHADIDS-WINFAMSR 136
Query: 201 GVQDLVFANRPYPLDLPLPVDILRI-PSLRSLYLAFWTFPG-IPGGARGPHVFPHLRELG 258
V++L D+P + L I SL+ LYL F I + + L+ L
Sbjct: 137 NVENLSLYLDEDKYDIP---EFLYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLS 193
Query: 259 LCFISIDAQDLDGLLQCSPVLETLAL 284
L +I + + +L P+LE+L L
Sbjct: 194 LYHCNISDESIAIILSGCPILESLLL 219
>AT5G41840.1 | chr5:16754436-16756263 REVERSE LENGTH=541
Length = 540
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 115/307 (37%), Gaps = 30/307 (9%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWASTXXXXXXXXXXXXXXXXXRRG 148
DRIS LP AL+ +I+S LP ++AA T VL+ RW+ + A +
Sbjct: 14 DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKY 73
Query: 149 HSHRVDLAAAASRVTRVLTSHRGPYLCVHLTCCNMATHWPMLSYWLSLLAANGVQDL--- 205
+ V + + P H+ C ++ +L W+ + GV D+
Sbjct: 74 SKSYESFMSFVDSVLALQAKTKTPLKRFHVKCEDVVDQSWVLE-WIPKVLKRGVLDIDLH 132
Query: 206 VFANRPYPLD---LPLPVDILRIPSLRSLYLAFWTFPGIPGGARGPHVFPHLRELGLCFI 262
+ ++R Y + LP I +L L + F G+ G P L+ L L +
Sbjct: 133 ITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQ--DGVHIDVEGGVSLPKLKTLHLDYF 190
Query: 263 SIDAQDLDGLLQCSPVLETLALVSNSYSPAHIRVRSRTLRCVLFWMSLAQEIALVVA--- 319
I+ L+ LL LE L L + L W +++ A V+
Sbjct: 191 KIETSMLNKLLSGCHALEELVLAN------------------LMWADSSEDEACHVSVSI 232
Query: 320 PRLDRLILWKTFMGFPGEIFCRTRVKIGYATELRVLGYLEPRMHELEIGNTTIEAGTKMS 379
P L RL ++ + GE E L + P + LE + ++ ++S
Sbjct: 233 PTLKRLNFCRSEDFYEGEFHFYEDYDEENINEGVSLSFDNPNLVYLEYSDVIVDKYKQVS 292
Query: 380 SDKTVPS 386
D V +
Sbjct: 293 FDSLVEA 299
>AT3G28410.1 | chr3:10640152-10642071 REVERSE LENGTH=466
Length = 465
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 30/200 (15%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWASTXXXXXXXXXXXXXXXXXRRG 148
D I+ +P +L +I+S +P A RT+VLS RWR VW T
Sbjct: 28 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPC------------------ 69
Query: 149 HSHRVDLAAAASRVTRVLTSHRGPYLCVHLTCCNMATHW-PMLSYWLSLLAANGVQDL-V 206
+D+ + LTS+ P + ++ + P + W+ + VQ+L V
Sbjct: 70 ----LDIKLKHGETNQTLTSYTAPIITSFKLVMDLNDNTVPQVDSWIEFALSRNVQNLSV 125
Query: 207 FA-NRPYPLDLPLPVDILRI-PSLRSLYLAFWTFPGIPGGARGPHVFPHLRELGLCFISI 264
F + Y P DI I SL+ L + F IP A + LR L L F I
Sbjct: 126 FVRDFTYTKTYRFP-DIFYISSSLKQLDVTLDFFDMIPTCAVS---WKSLRNLTLRFCQI 181
Query: 265 DAQDLDGLLQCSPVLETLAL 284
+ + +L P+LE+L L
Sbjct: 182 PDESMHNILSGCPILESLTL 201
>AT5G22700.1 | chr5:7545653-7547307 REVERSE LENGTH=438
Length = 437
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWAST 128
DRIS LP LL I+S LP ++A T++LSTRWR +W ST
Sbjct: 6 DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLST 45
>AT5G22660.2 | chr5:7536328-7537853 REVERSE LENGTH=451
Length = 450
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 88 DDRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWAST 128
+DRIS LP LLS I+S LP +A T++LSTRW+ +W ST
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLST 52
>AT5G02700.1 | chr5:609381-611679 REVERSE LENGTH=457
Length = 456
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWASTXXXXXXXXXXXXXXXXXRRG 148
D I+ +P +L +I+S +P A RT+VLS RWR VW T
Sbjct: 27 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPC------------------ 68
Query: 149 HSHRVDLAAAASRVTRVLTSHRGPYLCVHLTCCNMATHW-PMLSYWLSLLAANGVQDL-V 206
+D+ + + LTS+ P + ++ ++ P + W+ + VQ+L V
Sbjct: 69 ----LDITLKHGAMNQTLTSYTAPIITSFKLVMDLNSNTVPQVDSWIEFALSRNVQNLSV 124
Query: 207 FA-NRPYPLDLPLPVDILRIPSLRSLYLAFWTFPGIPGGARGPHVFPHLRELGLCFISID 265
F + Y P SL+ L + F IP + LR L L F I
Sbjct: 125 FVRDFTYSKTYRFPDIFYLSSSLKLLDVTLDFFDMIPTCTVS---WKSLRNLTLRFCQIP 181
Query: 266 AQDLDGLLQCSPVLETLAL 284
+ + +L P+LE+L L
Sbjct: 182 DESIHNILSGCPILESLTL 200
>AT5G22610.1 | chr5:7515217-7516916 FORWARD LENGTH=473
Length = 472
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 88 DDRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVW 125
+D IS+LP LLS I+S LP +D RT+VLS RW+ VW
Sbjct: 17 EDLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVW 54
>AT2G39415.1 | chr2:16458607-16458966 REVERSE LENGTH=120
Length = 119
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 89 DRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWAST 128
D IS LP +L I+S LP A RT+VLSTRWR VW+ T
Sbjct: 38 DSISSLPDVILQQILSSLPTNLAIRTSVLSTRWRHVWSDT 77
>AT2G04230.1 | chr2:1447025-1448678 REVERSE LENGTH=449
Length = 448
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 9/121 (7%)
Query: 88 DDRISRLPGALLSNIVSRLPARDAARTAVLSTRWRRVWASTXXXXXXXXXXXXXXXXXRR 147
+DRIS LP ALL I+S LP +A T+VLS RWR +W
Sbjct: 12 EDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVF------ 65
Query: 148 GHSHRVDLAAAASRVTRVLTSHRGPYL-CVHLTCCNMATHWPMLSYWLSLLAANGVQDLV 206
+D + V + L+ H+ P L +HL+ T + W++ A GV+ LV
Sbjct: 66 -DDDNIDPTMFSENVYKTLSLHKAPVLESLHLS-FEGRTDCLHVGIWIATAFARGVRKLV 123
Query: 207 F 207
Sbjct: 124 L 124
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,737,769
Number of extensions: 415495
Number of successful extensions: 1535
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 1535
Number of HSP's successfully gapped: 10
Length of query: 543
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 440
Effective length of database: 8,282,721
Effective search space: 3644397240
Effective search space used: 3644397240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)