BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0586600 Os01g0586600|AK069698
         (450 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69800.2  | chr1:26274416-26276325 REVERSE LENGTH=477          438   e-123
AT3G48530.1  | chr3:17987559-17989592 FORWARD LENGTH=425          170   1e-42

>AT1G69800.2 | chr1:26274416-26276325 REVERSE LENGTH=477
          Length = 476

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 287/429 (66%), Gaps = 3/429 (0%)

Query: 12  SCDAYFDTIQSKKKLPLSLQESLTAAFAQIPVSSFPDVPNGRVIEIPGDTSVLDAVRILS 71
           SC+AYF+ +QS+K LP SLQE+L +AFA IPVSSFP VP GRVIEI  +T V +AV+ILS
Sbjct: 47  SCEAYFEKVQSRKNLPKSLQETLNSAFAGIPVSSFPQVPGGRVIEIQAETPVSEAVKILS 106

Query: 72  KHNIRAAPVLNPECGAPADWKGRYLGIIDYSAIILWVLENAEIXXXXXXXXXXXXXXXXX 131
              I +APV+N +  +  DW+ RYLGIIDYS+IILWVLE+AE+                 
Sbjct: 107 DSKILSAPVINTDHESSLDWRERYLGIIDYSSIILWVLESAELAAIALSATSATAAGVGA 166

Query: 132 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGVAKDGLTAADHLGEDFYKVL 191
                                                E+G+ KD  TAAD LG+DFY+V+
Sbjct: 167 GAVGALGVAALGMTGPVAAAGLAAAAVGAAVAGGVAAERGIGKDAPTAADKLGKDFYEVI 226

Query: 192 LQQEPFKSTTVRSIVESYRWSPFVPIXXXXXXXXXXXXXSKYRLRNVPVIEPDKPIIKNF 251
           LQ+EPFKSTTVR+I++S+RW+PF+P+             SKYRLRNVPVI+  +P IKN+
Sbjct: 227 LQEEPFKSTTVRTILKSFRWAPFLPVSTESSMLSVMLLLSKYRLRNVPVIKTGEPDIKNY 286

Query: 252 ITQTGVVKGLQQCKGRDWFDYISALPLSDLGLPFMSLDEVITVNSGDLILEAFKCMKDNK 311
           +TQ+ VV GL+ CKGRDWFD+ISALP+SDLGLPFMS +EVI++ S +LILEAFK M+DN 
Sbjct: 287 VTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFMSPNEVISIESEELILEAFKRMRDNN 346

Query: 312 IGGVPVVEGPNKKLVGSVSIRDIRFLLLRPDLFSNFRQLTVMEFMKTIGSTVSDSGNGLV 371
           IGG+PVVEG NKK+VG++S+RDIR+LLL+P++FSNFRQLTV  F   I +   +   GL 
Sbjct: 347 IGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFRQLTVKSFATKIATAGEEY--GLA 404

Query: 372 KPPLTCSPDASLGSVIDSIASRITHRIYXXXX-XXXXXXXXTLRDVISCFIYEPPGYCDN 430
            P +TC PD++LGSVI+S+ASR  HR+Y             TLRDVISCF+ EPP Y +N
Sbjct: 405 IPAITCRPDSTLGSVINSLASRSVHRVYVAAGDENELYGVITLRDVISCFVSEPPNYFEN 464

Query: 431 YLASAMDKL 439
            L  ++ ++
Sbjct: 465 CLGFSVKEM 473



>AT3G48530.1 | chr3:17987559-17989592 FORWARD LENGTH=425
          Length = 424

 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 147/254 (57%), Gaps = 3/254 (1%)

Query: 186 DFYKVLLQQEPFKSTTVRSIVESYRWSPFVPIXXXXXXXXXXXXXSKYRLRNVPVIEPDK 245
           +F++VL   E +K+T VR I  ++RW+PF+ +             SKY+++++PV++   
Sbjct: 163 NFFEVLTSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGV 222

Query: 246 PIIKNFITQTGVVKGLQQCKGRDWFDYISALPLSDLGLPFMSLDEVITVNSGDLILEAFK 305
             I+N ITQ+GV+  L +C G  WF+      LS++GLP MS D +I +   + +L+AFK
Sbjct: 223 AKIENIITQSGVIHMLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFK 282

Query: 306 CMKDNKIGGVPVVEGPNKKLVGSVSIRDIRFLLLRPDLFSNFRQLTVMEFMKTIGSTVSD 365
            M+  +IGG+PV+E  ++K VG++S+RD++FLL  P+++ ++R +T   F+ ++   +  
Sbjct: 283 LMRRKRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVREHLEK 342

Query: 366 SGNG---LVKPPLTCSPDASLGSVIDSIASRITHRIYXXXXXXXXXXXXTLRDVISCFIY 422
            G+    ++   + C+ + +L  +I  + +   HRIY            TLRD+I+  ++
Sbjct: 343 CGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITLRDIIARLVH 402

Query: 423 EPPGYCDNYLASAM 436
           EP GY  ++    M
Sbjct: 403 EPSGYFGDFFDGVM 416




 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 23  KKKLPLSLQESLTAAFAQIPVSSFPDVPNGRVIEIPGDTSVLDAVRILSKHNIRAAPVLN 82
           ++K  LS  E L A F  IPVS+FP   + + IEI  DTS+ +AV+ LSK  + +APV++
Sbjct: 38  EQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAVQTLSKFKVLSAPVVD 97

Query: 83  PECGAPADWKGRYLGIIDYSAIILWVLENAE 113
            +    A W  RY+GI+++  I++W+L   E
Sbjct: 98  VDAPEDASWIDRYIGIVEFPGIVVWLLHQLE 128



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,221,405
Number of extensions: 302313
Number of successful extensions: 531
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 529
Number of HSP's successfully gapped: 4
Length of query: 450
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 348
Effective length of database: 8,310,137
Effective search space: 2891927676
Effective search space used: 2891927676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)