BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0557500 Os01g0557500|AK100765
(451 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51860.1 | chr3:19239458-19242519 FORWARD LENGTH=460 451 e-127
AT2G38170.3 | chr2:15990113-15993178 REVERSE LENGTH=476 443 e-125
AT5G01490.1 | chr5:195589-198465 FORWARD LENGTH=455 414 e-116
AT3G13320.1 | chr3:4315418-4317997 FORWARD LENGTH=442 326 2e-89
AT1G55730.1 | chr1:20831387-20833941 REVERSE LENGTH=442 322 2e-88
AT1G55720.1 | chr1:20828118-20830595 REVERSE LENGTH=468 310 8e-85
>AT3G51860.1 | chr3:19239458-19242519 FORWARD LENGTH=460
Length = 459
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/413 (60%), Positives = 295/413 (71%), Gaps = 7/413 (1%)
Query: 19 HGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIA 78
HGR TAHNMSSSSLRKKSD LV+KVP L+ +L+NLQEV L TKL +LF A+PLAI
Sbjct: 30 HGR--TAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAIL 87
Query: 79 AQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALF 138
A + + + +F LSL+GL PLAERVSFLTEQ+A YTGPTVGGLLNATCGNATELIIA+
Sbjct: 88 ANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAIL 147
Query: 139 ALLKGKIEVVKCXXXXXXXXXXXXXXXXXXFCGGVVNLGARQPYDRNQSDVSTALLFLAV 198
AL K+ VVK F GG+ N+ Q +DR Q+DV+ LL + +
Sbjct: 148 ALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQADVNFFLLLMGL 207
Query: 199 LCHSAPLLLRYAVAAGEHXXXXXXXXXXXXXXXXXXFVMLASYVAYLFFQLKTHRQLFEP 258
LCH PLLL+YA A GE VML +Y+AYL FQL THRQLFE
Sbjct: 208 LCHLLPLLLKYA-ATGE-VSTSMINKMSLTLSRTSSIVMLIAYIAYLIFQLWTHRQLFEA 265
Query: 259 QEVXXXXX---XXXXEEPALGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSF 315
Q+ E P +GF S WL MT VI++LSEYVV TIE S SWGLSVSF
Sbjct: 266 QQDDDDAYDDEVSVEETPVIGFWSGFAWLVGMTIVIALLSEYVVDTIEDASDSWGLSVSF 325
Query: 316 ISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQM 375
ISIILLPIVGNAAEHAGAIIFA KNKLDI+LGVALGSATQIS+FVVPLSV+VAWI+G++M
Sbjct: 326 ISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLSVIVAWILGIKM 385
Query: 376 DLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQP 428
DL+F +LET SL +A+++TAFTLQDGTSHY+KG++LLLCY++I ACFFV + P
Sbjct: 386 DLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIP 438
>AT2G38170.3 | chr2:15990113-15993178 REVERSE LENGTH=476
Length = 475
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/407 (58%), Positives = 282/407 (69%), Gaps = 3/407 (0%)
Query: 23 RTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCF 82
RTAHNMSSSSLRKKSD +++KVP L+ L+NLQEV L TKLA+LFPA+P AI
Sbjct: 32 RTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYC 91
Query: 83 RFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLK 142
Q W+F LSLLGL PLAERVSFLTEQ+A YTGPT+GGLLNATCGNATELIIA+ AL
Sbjct: 92 GVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTN 151
Query: 143 GKIEVVKCXXXXXXXXXXXXXXXXXXFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCHS 202
K+ VVK FCGG+ N+ Q +DR Q+DV+ LL L LCH
Sbjct: 152 NKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDRKQADVNFFLLLLGFLCHL 211
Query: 203 APLLLRYAVAAGEHXXXXXXXXXXXXXXXXXXFVMLASYVAYLFFQLKTHRQLFEPQEVX 262
PLL+ Y + GE VML SY+AYL FQL THRQLF+ QE
Sbjct: 212 LPLLVGY-LKNGE-ASAAVLSDMQLSISRGFSIVMLISYIAYLVFQLWTHRQLFDAQEQE 269
Query: 263 XXXXXXXXEEPA-LGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSFISIILL 321
+E A + F S WL MT VI++LSEYVV TIE S W LSVSFISIILL
Sbjct: 270 DEYDDDVEQETAVISFWSGFAWLVGMTLVIALLSEYVVATIEEASDKWNLSVSFISIILL 329
Query: 322 PIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKL 381
PIVGNAAEHAGA+IFA KNKLDI+LGVALGSATQI +FVVPL+++VAWI+G+ MDL+F
Sbjct: 330 PIVGNAAEHAGAVIFAFKNKLDISLGVALGSATQIGLFVVPLTIIVAWILGINMDLNFGP 389
Query: 382 LETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQP 428
LETG L +++++TAFTLQDG+SHY+KG++LLLCY +I CFFV + P
Sbjct: 390 LETGCLAVSIIITAFTLQDGSSHYMKGLVLLLCYFIIAICFFVDKLP 436
>AT5G01490.1 | chr5:195589-198465 FORWARD LENGTH=455
Length = 454
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/422 (50%), Positives = 286/422 (67%), Gaps = 13/422 (3%)
Query: 23 RTAHNMSSSSL-RKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQC 81
R +S+SSL RK+SD L+ +V +R +L NLQEV L TKL +LFPAVPLA+ A
Sbjct: 32 RVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHR 91
Query: 82 FRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALL 141
+ + WVFALSLLGL PLAER+SFLTEQIA +TGPTVGGL+NATCGNATE+IIA+ A+
Sbjct: 92 YDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVG 151
Query: 142 KGKIEVVKCXXXXXXXXXXXXXXXXXXFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCH 201
+ K+ +VK F GG+ NL Q +D Q D+++ LL+LA+LC
Sbjct: 152 QRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQ 211
Query: 202 SAPLLLRYAVAAGEHXXXXXXXXXXXXXXXXXXFVMLASYVAYLFFQL------KTHRQL 255
+ P+++R+ + A E+ FVML +Y+A+L F L L
Sbjct: 212 TLPMIMRFTMEAEEYDGSDVVVLSRASS-----FVMLIAYLAFLIFHLFSSHLSPPPPPL 266
Query: 256 FEPQEVXXXXXXXXXEEPA-LGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVS 314
+ ++V EE A +G SA+FWL +MT ++++LS+Y+V TI+ + SWGLSV
Sbjct: 267 PQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVG 326
Query: 315 FISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQ 374
FI IILLPIVGNAAEHAGA+IFA +NKLDITLG+ALGSATQI++FVVP++VLVAW MG++
Sbjct: 327 FIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIE 386
Query: 375 MDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQPAGHANS 434
MDL+F LLET +++LVT+ LQDGTS+Y+KG++LLLCY+VI ACFFV+ P+ N+
Sbjct: 387 MDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSTETNT 446
Query: 435 NG 436
Sbjct: 447 TN 448
>AT3G13320.1 | chr3:4315418-4317997 FORWARD LENGTH=442
Length = 441
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 255/436 (58%), Gaps = 17/436 (3%)
Query: 1 MEAAAAMEAGRKLAARHPHGRSRTAHNMSSSSLRKKSD--AALVRKVPVAPLRPLLANLQ 58
+EA M + +L + + A +SL ++ + + P AP +L +++
Sbjct: 10 IEAQVEMVSANELENKSLFRQEEDATQTKEASLMEQGSLSTSFPQHTPKAPKNSVLNSIK 69
Query: 59 EVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPT 118
V KL +L P PLAI + WVF L+L+G+ PLAER+ + TEQ+A YTGPT
Sbjct: 70 IVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPT 129
Query: 119 VGGLLNATCGNATELIIALFALLKGKIEVVKCXXXXXXXXXXXXXXXXXXFCGGVVNLGA 178
VGGLLNAT GN TELII++FAL G I VV+ FCGG+V
Sbjct: 130 VGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFYQK 189
Query: 179 RQPYDRNQSDVSTALLFLAVLCHSAPLLLRYA---VAAGEHXXXXXXXXXXXXXXXXXXF 235
Q +D+ + V++ LL +AV+ P +L Y V AG
Sbjct: 190 DQVFDKGIATVNSGLLLMAVMGILFPAVLHYTHSEVHAGSSELALSRFSSC--------- 240
Query: 236 VMLASYVAYLFFQLKTHRQLFEP---QEVXXXXXXXXXEEPALGFASALFWLALMTAVIS 292
+ML +Y AYLFFQLK+ + P + E+P + A+ WL+++TA +S
Sbjct: 241 IMLIAYAAYLFFQLKSQSNSYSPLDEESNQNEETSAEDEDPEISKWEAIIWLSILTAWVS 300
Query: 293 VLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGS 352
+LS Y+V IE S SW + ++FIS ILLPIVGNAAEHAGAI+FA+K+KLD++LGVA+GS
Sbjct: 301 LLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGS 360
Query: 353 ATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLL 412
+ QISMF VP V++ W+MG QMDL+F+L ET LF+ V+V AF LQ+G+S+Y KG++L+
Sbjct: 361 SIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLI 420
Query: 413 LCYIVIGACFFVARQP 428
LCY+++ A FFV P
Sbjct: 421 LCYLIVAASFFVHEDP 436
>AT1G55730.1 | chr1:20831387-20833941 REVERSE LENGTH=442
Length = 441
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 253/425 (59%), Gaps = 20/425 (4%)
Query: 11 RKLAARHPHGRSRTAHNMSSSSLRKKSDAALVRKVPV-APLRPLLANLQEVFLATKLAVL 69
+ L R R A +S + + S +A R+ P +L + + V L+ KL +L
Sbjct: 25 KSLFRRDTDSPERKA----ASLMEQGSLSASFRECSTKTPNNSVLQSFKIVILSNKLNLL 80
Query: 70 FPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGN 129
P PLAI ++ W+F LSL+G+ PLAER+ + TEQ+A YTG TVGGLLNAT GN
Sbjct: 81 LPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGN 140
Query: 130 ATELIIALFALLKGKIEVVKCXXXXXXXXXXXXXXXXXXFCGGVVNLGARQPYDRNQSDV 189
TELII++FAL G I VV+ FCGG+V Q +D+ + V
Sbjct: 141 VTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQKEQVFDKGNAVV 200
Query: 190 STALLFLAVLCHSAPLLLRYA---VAAGEHXXXXXXXXXXXXXXXXXXFVMLASYVAYLF 246
++ LL +AV+ P +L Y V AG +ML +Y AYLF
Sbjct: 201 NSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSC---------IMLVAYAAYLF 251
Query: 247 FQLKTHRQLFEP---QEVXXXXXXXXXEEPALGFASALFWLALMTAVISVLSEYVVGTIE 303
FQLK+ + P + E+P + A+ WL+++TA +S+LS Y+V IE
Sbjct: 252 FQLKSQPSSYTPLTEETNQNEETSDDDEDPEISKWEAIIWLSILTAWVSLLSGYLVDAIE 311
Query: 304 PTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPL 363
S SW + +SFIS+ILLPIVGNAAEHAGAI+FA+K+KLD++LGVA+GS+ QISMF VP
Sbjct: 312 GASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPF 371
Query: 364 SVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFF 423
V++ W+MG QMDL+F+L ET +LF+ V+V AF LQ+GTS+Y KG++L+LCY+++ A FF
Sbjct: 372 CVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFF 431
Query: 424 VARQP 428
V P
Sbjct: 432 VHEDP 436
>AT1G55720.1 | chr1:20828118-20830595 REVERSE LENGTH=468
Length = 467
Score = 310 bits (795), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 242/412 (58%), Gaps = 21/412 (5%)
Query: 21 RSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQ 80
++ A M SLR++ A P ++ + + V L+ KL +L P PLAI
Sbjct: 51 QTNAASLMEQGSLRERRAKA--------PRNSVVQSFKIVILSNKLNLLLPFGPLAILVH 102
Query: 81 CFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFAL 140
++ W F LSL+G+ PLAER+ + TEQ++ YTG TVGGLLNAT GN ELII++ AL
Sbjct: 103 YLTDNKGWFFLLSLVGITPLAERLGYATEQLSCYTGATVGGLLNATFGNVIELIISIIAL 162
Query: 141 LKGKIEVVKCXXXXXXXXXXXXXXXXXXFCGGVVNLGARQPYDRNQSDVSTALLFLAVLC 200
G I VV+ FCGG+V G Q +D+ + VS+ +L +AV+
Sbjct: 163 KNGMIRVVQLTLLGSILSNILLVLGCAFFCGGLVFPGKDQVFDKRNAVVSSGMLLMAVMG 222
Query: 201 HSAPLLLRYA---VAAGEHXXXXXXXXXXXXXXXXXXFVMLASYVAYLFFQLKTHRQLFE 257
P L Y V AG +ML +Y AYLFFQLK+ +
Sbjct: 223 LLFPTFLHYTHSEVHAGSSELALSRFISC---------IMLVAYAAYLFFQLKSQPSFYT 273
Query: 258 PQEVXXXXXXXXXEEPALGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSFIS 317
+ E+P + A+ WL++ TA +S+LS Y+V IE TS SW + +SFIS
Sbjct: 274 EKTNQNEETSNDDEDPEISKWEAIIWLSIFTAWVSLLSGYLVDAIEGTSVSWKIPISFIS 333
Query: 318 IILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDL 377
+ILLPIVGNAAEHAGAI+FA+K+KLD++LGVA+GS+ QISMF VP V++ W+MG QMDL
Sbjct: 334 VILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDL 393
Query: 378 DFKLLETGSLFMAVLVTAFTLQ-DGTSHYLKGILLLLCYIVIGACFFVARQP 428
+ +L ET +L + V+V AF LQ +GTS+Y K ++L+LCY+++ A FFV P
Sbjct: 394 NLQLFETATLLITVIVVAFFLQLEGTSNYFKRLMLILCYLIVAASFFVHEDP 445
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,410,310
Number of extensions: 248385
Number of successful extensions: 669
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 647
Number of HSP's successfully gapped: 6
Length of query: 451
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 349
Effective length of database: 8,310,137
Effective search space: 2900237813
Effective search space used: 2900237813
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)