BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0527600 Os01g0527600|AK108380
(385 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49500.1 | chr3:18349193-18353205 REVERSE LENGTH=1197 471 e-133
AT1G14790.1 | chr1:5094317-5097817 REVERSE LENGTH=1108 281 3e-76
AT4G11130.1 | chr4:6780522-6784390 FORWARD LENGTH=1134 244 7e-65
AT2G19930.1 | chr2:8607533-8612441 REVERSE LENGTH=978 87 2e-17
AT2G19920.1 | chr2:8602222-8606887 REVERSE LENGTH=928 80 1e-15
AT2G19910.1 | chr2:8595820-8600757 REVERSE LENGTH=993 78 7e-15
>AT3G49500.1 | chr3:18349193-18353205 REVERSE LENGTH=1197
Length = 1196
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/387 (60%), Positives = 290/387 (74%), Gaps = 2/387 (0%)
Query: 1 ILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLY 60
+ G V IAKNPCLHPGDVRILEAVDVP+LHH+ DCL+FPQKG+RPH NEASGSDLDGDLY
Sbjct: 810 VKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLY 869
Query: 61 FVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVV 120
FV WD+KLIPP +KS+ M Y E K L R V+ DIIDFF +N+ +E LG ICNAHVV
Sbjct: 870 FVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVV 929
Query: 121 HADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSE 180
HAD SEYGAMDE+C+ LAELAATAVDFPKTGK+ MP HLKPK+YPDFMGKED Q+YKS
Sbjct: 930 HADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSN 989
Query: 181 KILGRLYRSIQEASNGD--VVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQL 238
KILGRLYR ++E + D S+E P+ +PYD LE+PG D + AW KC YD QL
Sbjct: 990 KILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQL 1049
Query: 239 SALLSQYRVRTEAELVTGHITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQ 298
LL QY+V+ E E+VTGHI + K +SKKQG++K+RLK +Y++L+KEF+ FE D
Sbjct: 1050 IGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDH 1109
Query: 299 CEIGDDEKNLLYEMKASAWYQVTYHPKWVEKSRGILGPDGEEIPASLSFAWIPVDYLARI 358
+ ++EKN+LYE KASAWY VTYHP+WV+KS + PD A LSFAWI DYLARI
Sbjct: 1110 ENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARI 1169
Query: 359 KLRCHGKVRVEGQKPVERLAAYISERI 385
K+R ++ KPV+ LA ++++R+
Sbjct: 1170 KIRSREMGSIDSAKPVDSLAKFLAQRL 1196
>AT1G14790.1 | chr1:5094317-5097817 REVERSE LENGTH=1108
Length = 1107
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/386 (41%), Positives = 231/386 (59%), Gaps = 38/386 (9%)
Query: 1 ILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLY 60
I G VV+AKNPCLHPGDVR+L+AV+VP L+H+VDC+VFPQKG RPH NE SGSDLDGD+Y
Sbjct: 744 ITGPVVVAKNPCLHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIY 803
Query: 61 FVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVV 120
FV WD++L+PP ++ PMDY+P + L V+ ++ ++F +++++LG I NAH
Sbjct: 804 FVCWDQELVPP--RTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTA 861
Query: 121 HADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSE 180
AD A + CI LA+ +TAVDFPKTG A++P HL K YPDFM K D +Y+S+
Sbjct: 862 FADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESK 921
Query: 181 KILGRLYRSIQEAS---------NGDVVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCK 231
++G+L+R ++E + DV S+ YD D+EV G +++ A+ K
Sbjct: 922 NVIGKLFREVKERAPPLISIKSFTLDVASKS--------YDKDMEVDGFEEYVDEAFYQK 973
Query: 232 CSYDAQLSALLSQYRVRTEAELVTGHITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTF 291
+YD +L L+ Y ++TEAE+++G I + K+ +K++ + + A ALRKE S F
Sbjct: 974 ANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD--AESIGRAVRALRKETLSLF 1031
Query: 292 ESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWVEKSRGILGPDGEEIPASLSFAWIP 351
+ ++ E KASAWY VTYH + L +G LSFAW
Sbjct: 1032 NASEEEENE----------SAKASAWYHVTYHSSYWG-----LYNEGLNRDHFLSFAWCV 1076
Query: 352 VDYLARIKLRCHGKVRVEGQKPVERL 377
D L RIK G R + Q+ +ERL
Sbjct: 1077 YDKLVRIKKTNLG--RRQRQETLERL 1100
>AT4G11130.1 | chr4:6780522-6784390 FORWARD LENGTH=1134
Length = 1133
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 205/366 (56%), Gaps = 33/366 (9%)
Query: 1 ILGTVVIAKNPCLHPGDVRILEAVDVPELHH----LVDCLVFPQKGERPHANEASGSDLD 56
++G VV+ KNPCLHPGD+R+L+A+ E+H +DC++FPQKGERPH NE SG DLD
Sbjct: 775 VIGKVVVTKNPCLHPGDIRVLDAI--YEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLD 832
Query: 57 GDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICN 116
GD +FV+WDEK+IP PMDY+ + + V+ +I FF+ MIS+ LG I
Sbjct: 833 GDQFFVSWDEKIIPSEMDP--PMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVIST 890
Query: 117 AHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQS 176
AH+VHAD A +KC+ LA L + AVDF KTG A MP LKP+ +PDF+ + + +
Sbjct: 891 AHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPT 950
Query: 177 YKSEKILGRLYRSIQEASNGDVVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDA 236
Y SE + G+LYR+++ S+ E + + + YD+ LE G F+ +A + Y
Sbjct: 951 YISESVFGKLYRAVK--SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGE 1008
Query: 237 QLSALLSQYRVRTEAELVTGHIT---FLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFES 293
+L++L+ Y E E++TG + + +++ GD+KDR+ + L KE FE
Sbjct: 1009 KLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK 1068
Query: 294 IASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWVEKSRGILGPDGEEIPASLSFAWIPVD 353
CE +K L ASAWY VTY+P +E LSF WI D
Sbjct: 1069 ----SCEDEQQKKKL-----ASAWYYVTYNPN-----------HRDEKLTFLSFPWIVGD 1108
Query: 354 YLARIK 359
L IK
Sbjct: 1109 VLLDIK 1114
>AT2G19930.1 | chr2:8607533-8612441 REVERSE LENGTH=978
Length = 977
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 29/231 (12%)
Query: 1 ILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVD----CLVFPQKGERPHANEASGSDLD 56
I G V++ +NP LH GD+ IL+A V L V + FPQKG R +E +G D D
Sbjct: 625 ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFD 684
Query: 57 GDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQ-------------HDIIDFFL 103
GD+YF++ + +L+ K S + +PP R SQ F
Sbjct: 685 GDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHA 744
Query: 104 KNMI---SENLGRICNAHVVHAD--LSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPP 158
N+I +++ I + ++ D E M +K + L ++ A+D PK G +P
Sbjct: 745 SNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPN 804
Query: 159 HLKPKVYPDFMGKEDGQSYKSEKILGRLY-----RSIQEASNGDVVSQEVC 204
LKP ++P +M E + ++S ILG ++ ++ +E S +S+ C
Sbjct: 805 KLKPDIFPHYM--ERDKKFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPC 853
>AT2G19920.1 | chr2:8602222-8606887 REVERSE LENGTH=928
Length = 927
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 30/239 (12%)
Query: 5 VVIAKNPCLHPGDVRILEAVDVPELHHLVD----CLVFPQKGERPHANEASGSDLDGDLY 60
V++ +NP LH GD+ IL+A V L V + FPQKG R +E +G D DGD+Y
Sbjct: 629 VLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMY 688
Query: 61 FVTWDEKLIPPGKKSWNPMDYSPPEAK----QLPRQVS----QHDIIDFFLKNMISEN-- 110
F++ + KL+ K S P S P +K + P ++S + ++ FLK S +
Sbjct: 689 FISRNPKLLEHYKPS-EPWVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSPSSV 747
Query: 111 LGRICNAHVVHAD---------LSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLK 161
+G+ ++ + D + E M +K + L ++ A+D PKTG +P +K
Sbjct: 748 IGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPLDVK 807
Query: 162 PKVYPDFMGKEDGQSYKSEKILGRLYRSIQ----EASNGDVVSQEVCTPNDLPYDIDLE 216
++P +M E +++KS ILG ++ ++ E + +S+ C ++ + D+E
Sbjct: 808 VDLFPHYM--ERNKTFKSTSILGLIFDTVDFHNAEDTTPSGISKLQCFEDEPVSEFDME 864
>AT2G19910.1 | chr2:8595820-8600757 REVERSE LENGTH=993
Length = 992
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 1 ILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVD----CLVFPQKGERPHANEASGSDLD 56
I G V++ +NP LH GD+ +L+A V L V + FPQKG R +E +G D D
Sbjct: 636 ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFD 695
Query: 57 GDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQ-------VSQHDIIDFFLKNMISE 109
GD+YF++ + KL+ K S + S P R+ + ++ FLK
Sbjct: 696 GDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEELFKMFLK----- 750
Query: 110 NLGRICNAHVV-HADLSEYGAMD-----------------EKCIHLAELAATAVDFPKTG 151
R C V+ A G MD + + L ++ A+D PK G
Sbjct: 751 --ARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKG 808
Query: 152 KLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSI 190
+PP L+ K +P +M ++ + ++S ILG ++ ++
Sbjct: 809 AKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTV 847
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,010,237
Number of extensions: 388814
Number of successful extensions: 944
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 931
Number of HSP's successfully gapped: 6
Length of query: 385
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 285
Effective length of database: 8,364,969
Effective search space: 2384016165
Effective search space used: 2384016165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)