BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0518500 Os01g0518500|AK072383
(649 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26380.1 | chr3:9660140-9663145 FORWARD LENGTH=648 656 0.0
AT5G08370.1 | chr5:2691116-2693441 REVERSE LENGTH=397 86 5e-17
AT5G08380.1 | chr5:2694851-2697616 REVERSE LENGTH=411 80 4e-15
AT3G56310.1 | chr3:20882886-20885745 FORWARD LENGTH=438 77 4e-14
>AT3G26380.1 | chr3:9660140-9663145 FORWARD LENGTH=648
Length = 647
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/623 (51%), Positives = 418/623 (67%), Gaps = 15/623 (2%)
Query: 32 SEANEQLAEFPPRGWNSYDSFSWIVDENTYMQNAEILAEKLLPHGYEFAVIDYLWYRKYV 91
+ + +Q A FPPRGWNSYDSF W + E ++Q+AEI++++LLPHGY++ V+DYLWYRK V
Sbjct: 32 ARSRQQHASFPPRGWNSYDSFCWTISEAEFLQSAEIVSKRLLPHGYQYVVVDYLWYRKKV 91
Query: 92 HGAYTDSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIHLMKGISLQ 151
GAY DS GFD IDEWGR PD R+PSSR KGF+++A KVH MGLKFGIH+M GIS Q
Sbjct: 92 EGAYVDSLGFDVIDEWGRLHPDPGRWPSSRGGKGFTEVAEKVHRMGLKFGIHVMGGISTQ 151
Query: 152 AVNGNTPILDIKTGKPYVEDGRQWTARDIGLTHRTCAWMPHGFMSVNTDIGAGKAFLRSL 211
A N N+ ++D G Y E GRQW A+DIG+ R C WM HGFMSVNT +GAGKAFLRSL
Sbjct: 152 AYNANSLVMDSVKGGAYEESGRQWRAKDIGIKERACVWMSHGFMSVNTKLGAGKAFLRSL 211
Query: 212 YQQYADWGVDFVKVDCIFGTDYSPKEIITISELLAELDRPIILSISPGTEVTPALAKNIS 271
Y+QYA+WGVDF+K DC+FGTD++ +EI +SE+L ELDRP++ SISPGT VTP +AK +S
Sbjct: 212 YRQYAEWGVDFIKHDCVFGTDFNIEEITYVSEVLKELDRPVLYSISPGTSVTPTMAKEVS 271
Query: 272 QHVNMYRITGDDWDNWKXXXXXXXXXXXXXXANKIGAIGLRGRSWPDLDMLPFGWLTNAG 331
Q VNMYRITGDDWD WK ++ IGA GL+G+SWPDLDMLP GWLT+ G
Sbjct: 272 QLVNMYRITGDDWDTWKDVTAHFDISRDLSASSMIGARGLQGKSWPDLDMLPLGWLTDQG 331
Query: 332 VNQGPHRQCELTSDEQRTQIALWSMAKSPLMYGGDLRHLDNDTLSIITNPTLLKINHYSI 391
N GPHR C L +EQ++Q+ LWS+AKSPLM+GGD+R+LD T ++ITNPTLL+IN YS
Sbjct: 332 SNVGPHRACNLNLEEQKSQMTLWSIAKSPLMFGGDVRNLDATTYNLITNPTLLEINSYSS 391
Query: 392 NNMEFHHVHSERTSKEDKHSSRFISEDLVHVPKIDGVS----LGLTACSDDKANGWYMFS 447
NN EF ++ + R S+ +KH + H P +S GLT+C + KAN W++
Sbjct: 392 NNKEFPYITATRVSR-NKH------KGYPHHPTGKNISTKHAFGLTSCKEQKANTWFIVD 444
Query: 448 QHGKSDHICRNYGMQDDKNISFCLGKTIPLLTSDDIIVHNEEYQTKFHLANMDSDDACLD 507
++ IC N + FCL LL SD + HN+ YQ K HL D +CL
Sbjct: 445 KN--RGQICWNQHSSEKLEKPFCLYNRKALLASDKKLKHNQLYQGKLHLHTNDKAQSCLA 502
Query: 508 ASGSQRRTSSDSKFPMFSRCRWHAMQMWELNEKGNLISSYSRLCATVESNNKGVVTTGAV 567
AS Q+ TS D S C+ A QMWEL+ G L +SYS LCA + ++ V
Sbjct: 503 ASSQQKLTSKDYSQGALSPCKLDANQMWELHSNGTLENSYSGLCAVLNPVKAAEASSNGV 562
Query: 568 ARAWIATGSKGEIYLAFFNLDSMSRKITARISDLEKVL-GSTFIRKDTCSCTEVWSGRNF 626
R+WIATG +GE+Y+AFFNL+ KI+A+ISD+ L G + +C+ E+WSG++F
Sbjct: 563 -RSWIATGRRGEVYVAFFNLNQEKTKISAKISDIATALRGKKNLVGASCTSHELWSGKDF 621
Query: 627 GRVEEEISAVVKSHGSMVFEITC 649
G ++ +S V+ HG +F + C
Sbjct: 622 GPTKDSVSIQVEPHGPALFVLHC 644
>AT5G08370.1 | chr5:2691116-2693441 REVERSE LENGTH=397
Length = 396
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 137/358 (38%), Gaps = 92/358 (25%)
Query: 35 NEQLAEFPPRGWNSYDSFSWIVDENTYMQNAE-ILAEKLLPHGYEFAVIDYLWYRKYVHG 93
N LA P GWNS++ F ++E Q A+ +++ L GY++ ID
Sbjct: 33 NNGLALSPQMGWNSWNHFQCNINETLIKQTADAMVSSGLSAIGYKYINID---------- 82
Query: 94 AYTDSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIHLMKGISLQAV 153
D +G D G FPS G L++ VH GLK GI+ G
Sbjct: 83 ---DCWGELKRDSQGSLVAKASTFPS-----GIKALSDYVHSKGLKLGIYSDAGT----- 129
Query: 154 NGNTPILDIKTGKPYVEDGRQWTARDIGLTHRTCAW-MPHGFMSVNTDIGAGKAFLRSLY 212
TC+ MP D
Sbjct: 130 -------------------------------LTCSQTMPGSLGHEEQDA----------- 147
Query: 213 QQYADWGVDFVKVDCIFGTDYSPKEII-TISELLAELDRPIILSISPGTEVTPAL-AKNI 270
+ +A WG+D++K D T SP+E +S+ L R I S+ + PA A +I
Sbjct: 148 KTFASWGIDYLKYDNCENTGTSPRERYPKMSKALLNSGRSIFFSLCEWGQEDPATWAGDI 207
Query: 271 SQHVNMYRITGDDWDNWKXXXXXXXXXXXXXXANKIGAIGLRGRSWPDLDMLPFGWLTNA 330
N +R TGD DNWK N A R SW D DML G N
Sbjct: 208 G---NSWRTTGDIQDNWKSMTLIADQ-------NDRWASYARPGSWNDPDMLEVG---NG 254
Query: 331 GVNQGPHRQCELTSDEQRTQIALWSMAKSPLMYGGDLRHLDNDTLSIITNPTLLKINH 388
G +T +E + ++W++AK+PL+ G DLR +D T +++N ++ +N
Sbjct: 255 G----------MTKEEYMSHFSIWALAKAPLLIGCDLRSMDKVTFELLSNKEVIAVNQ 302
>AT5G08380.1 | chr5:2694851-2697616 REVERSE LENGTH=411
Length = 410
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 130/353 (36%), Gaps = 88/353 (24%)
Query: 38 LAEFPPRGWNSYDSFSWIVDENTYMQNAEILAEKLLPH-GYEFAVIDYLWYRKYVHGAYT 96
L PP GWNS++ FS +DE + A+ L L GY + ID W
Sbjct: 50 LGVTPPMGWNSWNHFSCNIDEKMIKETADALVTTGLSKLGYNYVNIDDCWAEI------- 102
Query: 97 DSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIHLMKGISLQAVNGN 156
+ D G P FPS G +A+ VH GLK GI+
Sbjct: 103 ------SRDSKGSLVPKKSTFPS-----GIKAVADYVHSKGLKLGIY------------- 138
Query: 157 TPILDIKTGKPYVEDGRQWTARDIGLTHRTCAWMPHGFMSVNTDIGAGKAFLRSLYQQYA 216
D G+ + + + + + +A
Sbjct: 139 -------------SDA--------------------GYFTCSKTMPGSLGYEEHDAKTFA 165
Query: 217 DWGVDFVKVDCIFGTDYSPK-EIITISELLAELDRPIILSISPGTEVTPALAKNISQHVN 275
+WG+D++K D P ++ L + RPI S+ ++ PAL S N
Sbjct: 166 EWGIDYLKYDNCNSDGSKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWG--SPVGN 223
Query: 276 MYRITGDDWDNWKXXXXXXXXXXXXXXANKIGAIGLRGRSWPDLDMLPFGWLTNAGVNQG 335
+R T D D W N++ A R W D DML G N G
Sbjct: 224 SWRTTNDIKDTW-------LSMISIADMNEVYAEHARPGGWNDPDMLEVG---NGG---- 269
Query: 336 PHRQCELTSDEQRTQIALWSMAKSPLMYGGDLRHLDNDTLSIITNPTLLKINH 388
+T DE ++W+++K+PL+ G D+R++ +T+ I+ N ++ IN
Sbjct: 270 ------MTKDEYIVHFSIWAISKAPLLLGCDIRNMTKETMEIVANKEVIAINQ 316
>AT3G56310.1 | chr3:20882886-20885745 FORWARD LENGTH=438
Length = 437
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 131/362 (36%), Gaps = 89/362 (24%)
Query: 29 WGTSEANEQLAEFPPRGWNSYDSFSWIVDENTYMQNAEILAEKLLPHGYEFAVIDYLWYR 88
+G + N LA P GWNS++ F+ ++E + A+ L L
Sbjct: 60 YGRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSSGLAD------------L 107
Query: 89 KYVHGAYTDSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIHLMKGI 148
Y+H D + D G+ P + FPS G LA+ VH GLK GI+ G+
Sbjct: 108 GYIHVNIDDCWSNLLRDSEGQLVPHPETFPS-----GIKLLADYVHSKGLKLGIYSDAGV 162
Query: 149 SLQAVNGNTPILDIKTGKPYVEDGRQWTARDIGLTHRTCAWMPHGFMSVNTDIGAGKAFL 208
TC P D
Sbjct: 163 ------------------------------------FTCEVHPGSLFHEVDDADI----- 181
Query: 209 RSLYQQYADWGVDFVKVDCIFGTDYSPKE-IITISELLAELDRPIILSISPGTEVTPAL- 266
+A WGVD++K D F P E + + L R I S+ PAL
Sbjct: 182 ------FASWGVDYLKYDNCFNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALW 235
Query: 267 AKNISQHVNMYRITGDDWDNWKXXXXXXXXXXXXXXANKIGAIGLRGRSWPDLDMLPFGW 326
AK + N +R T D D W NK A G W D DML G
Sbjct: 236 AKEVG---NSWRTTDDINDTWASMTTIADLN------NKWAAYAGPG-GWNDPDMLEIG- 284
Query: 327 LTNAGVNQGPHRQCELTSDEQRTQIALWSMAKSPLMYGGDLRHLDNDTLSIITNPTLLKI 386
N G +T +E R ++W++ K+PL+ G D+R++ +TL I++N ++ +
Sbjct: 285 --NGG----------MTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETLEILSNKEIIAV 332
Query: 387 NH 388
N
Sbjct: 333 NQ 334
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,927,516
Number of extensions: 649346
Number of successful extensions: 1225
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1217
Number of HSP's successfully gapped: 4
Length of query: 649
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 544
Effective length of database: 8,227,889
Effective search space: 4475971616
Effective search space used: 4475971616
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)