BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0507900 Os01g0507900|AK102473
(314 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310 325 2e-89
AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293 205 3e-53
AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299 201 5e-52
AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242 172 3e-43
AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290 160 9e-40
ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197 149 2e-36
AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280 128 3e-30
AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306 120 1e-27
AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371 109 2e-24
AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388 107 1e-23
>AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310
Length = 309
Score = 325 bits (833), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 182/225 (80%), Gaps = 1/225 (0%)
Query: 73 LEELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAG 132
EELDTTNMLLRQRIVFLGS VDDM+ADL+ISQLLLLDAED +DI LFINSPGGSITAG
Sbjct: 81 FEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAG 140
Query: 133 MGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVT 192
MG+YDAMK CKAD+STVC GLAASMGAFLLA+G+KGKR+CMPN+++MIHQP G AGGK T
Sbjct: 141 MGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKAT 200
Query: 193 EMGLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVIDEGK 252
EM ++IREMMY KIK+NKI SRITGKPE +I+ DT D F++PWEAK+YG++D+VID+GK
Sbjct: 201 EMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGK 260
Query: 253 XXXXXXXXXXXXXXKSRVWYLWNASGPTRKIMKNLPSEEKLIQNG 297
K++VW LW G T+K NLPSE + QNG
Sbjct: 261 PGLIAPIGDGTPPPKTKVWDLWKVEG-TKKDNTNLPSERSMTQNG 304
>AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293
Length = 292
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 75 ELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMG 134
E D +LLR+RIVFLGS +DD AD I+SQLLLLDA+D KDIKLFINSPGGS++A M
Sbjct: 77 ESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMA 136
Query: 135 VYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEM 194
+YD ++ +AD+ST+ G+AAS + +L AGTKGKRF MPN RIMIHQP GGA G+ ++
Sbjct: 137 IYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDV 196
Query: 195 GLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVIDEGKXX 254
+Q +E+M+ K + I++ T + EQ+ +D D +MSP EA +YG++D VID
Sbjct: 197 EIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVID---GD 253
Query: 255 XXXXXXXXXXXXKSRVWYLWNASGPTRKIMKNLPSEE 291
K RV Y + P + + +P +E
Sbjct: 254 SIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDE 290
>AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299
Length = 298
Score = 201 bits (510), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 128/169 (75%)
Query: 80 NMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVYDAM 139
+ L + RI+ G VDD A++I++QLL LDA D TKDI +++NSPGGS+TAGM ++D M
Sbjct: 117 SQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTM 176
Query: 140 KFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEMGLQIR 199
+ + D+STVC GLAASMGAFLL+AGTKGKR+ +PN+RIMIHQP GGA G T++ +Q
Sbjct: 177 RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQAN 236
Query: 200 EMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVI 248
EM++ K +N L+ TG+ E+I++DT D+FMS EAK+YG++D VI
Sbjct: 237 EMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
>AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242
Length = 241
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 124/174 (71%)
Query: 77 DTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVY 136
D + LL++RI+ + P++D ++ ++++QLL L++E+ +K I +++NSPGG +TAG+ +Y
Sbjct: 48 DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107
Query: 137 DAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEMGL 196
D M++ ++ IST+C G AASM + LLAAG KG+R +PNA +MIHQPSGG G+ ++ +
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167
Query: 197 QIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVIDE 250
++++ +N++ + TG+P + + + D+FM+P EAK +GI+D VIDE
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221
>AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290
Length = 289
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 115/174 (66%)
Query: 76 LDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGV 135
LD +++L R RI+F+G P++ A +ISQL+ L + D DI +++N PGGS + + +
Sbjct: 113 LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 172
Query: 136 YDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEMG 195
YD M + K + TV FG+AAS GA LLA G KG R+ MPN R+MIHQP G GG V ++
Sbjct: 173 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVR 232
Query: 196 LQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVID 249
Q+ E + + KI+++ + TG+P E++ + T+ D F+S EA ++G++D +++
Sbjct: 233 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 286
>ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197
Length = 196
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 76 LDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGV 135
+D N L R+R+ FLG VD ++ +IS ++ L E TKD+ LFINSPGG + +GM +
Sbjct: 21 VDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAI 80
Query: 136 YDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQP-SGGAGGKVTEM 194
YD M+F + D+ T+C GLAAS+ +F+L G KR P+AR+MIHQP S + E
Sbjct: 81 YDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEF 140
Query: 195 GLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSV 247
L+ E++ + I ++ + TGKP I ED + D FMS EA+ +GIVD V
Sbjct: 141 ILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLV 193
>AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280
Length = 279
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 106/173 (61%)
Query: 76 LDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGV 135
+D N L R+R++F+G +D+ ++ I++ +L LD D ++ I +++N PGG +T + +
Sbjct: 88 VDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAI 147
Query: 136 YDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEMG 195
YD MK K+ + T C GLA ++ FLLAAG KG RF MP +RI + P+G A G+ ++
Sbjct: 148 YDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQ 207
Query: 196 LQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVI 248
+ +E+ + + L++ TG+P E++ +D + EA +YG++D ++
Sbjct: 208 NEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260
>AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306
Length = 305
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 77 DTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPG--------GS 128
D + L + RIV+LG + +LI+++ L L ED+ K I L+INS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 129 ITAGMGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAG 188
T +YD M + K I T+C G A A LL AG KG R +P++ IMI QP
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224
Query: 189 GKVTEMGLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVI 248
G+ T++ + +E+ + K ++ K+ S+ GK EQI+ D K + SP EA +YGI+D V+
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284
>AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371
Length = 370
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 106/187 (56%), Gaps = 11/187 (5%)
Query: 77 DTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPG---------G 127
D +MLL RIV++G P+ +L++++L+ L D + I ++INS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 128 SITAGMGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGA 187
+ G +YD++ K ++ TVC G A LL+AGTKGKRF MP+A+ MI QP +
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240
Query: 188 GG--KVTEMGLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVD 245
G +++ ++ +E++ + + ++LS+ TG E + + Y+M +AK++G++D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 246 SVIDEGK 252
++ G+
Sbjct: 301 RILWRGQ 307
>AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388
Length = 387
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 77 DTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPG---------G 127
D ++LL RI +LG P+ +L+++Q + LD ++ TK I L+INSPG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 128 SITAGMGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPS-GG 186
S T + D + +CK+D+ T+ G+A A LL+ G KG R P++ ++ P
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 187 AGGKVTEMGLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDS 246
+ G +M ++ +E+ ++L++ TGK +EQI+ED K ++ A DYGI D
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADK 350
Query: 247 VID 249
+ D
Sbjct: 351 IAD 353
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,266,736
Number of extensions: 201501
Number of successful extensions: 510
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 503
Number of HSP's successfully gapped: 10
Length of query: 314
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 216
Effective length of database: 8,419,801
Effective search space: 1818677016
Effective search space used: 1818677016
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)