BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0503400 Os01g0503400|AK068118
(550 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80830.1 | chr1:30373066-30375644 REVERSE LENGTH=533 412 e-115
AT1G15960.1 | chr1:5482202-5485066 REVERSE LENGTH=528 404 e-113
AT1G47240.1 | chr1:17309043-17311308 REVERSE LENGTH=531 253 2e-67
AT2G23150.1 | chr2:9856422-9858565 REVERSE LENGTH=510 237 1e-62
AT5G67330.1 | chr5:26861822-26863580 FORWARD LENGTH=513 230 1e-60
AT4G18790.1 | chr4:10317785-10319660 REVERSE LENGTH=531 216 2e-56
AT5G03280.1 | chr5:788589-793066 FORWARD LENGTH=1295 79 4e-15
>AT1G80830.1 | chr1:30373066-30375644 REVERSE LENGTH=533
Length = 532
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/472 (43%), Positives = 307/472 (65%), Gaps = 3/472 (0%)
Query: 65 QAPTWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFIFVLTVQSLA 124
+ +WK F A++GPGF++SIAY+DP N +TDL AG+ ++Y LLW++L L +QSLA
Sbjct: 39 EKKSWKNFFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLA 98
Query: 125 ANLGIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLHIPFWA 184
ANLG++TG+HLAE C EY K + LW++AE+ V+A IP V+GTA A NML IP W
Sbjct: 99 ANLGVVTGKHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFSIPVWI 158
Query: 185 GVLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPAGGVIEGLFIPR 244
GVL G T ++L LQ YG RK+EF I+ L+ +A CFF+EL P G V+ GLF+P+
Sbjct: 159 GVLLTGLSTLILLALQKYGVRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQ 218
Query: 245 PKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGRKDASTFFLLENALALFIA 304
KG+ +T A+++ G++V+PHNLFLHS+LVL+RK+P ++ G K+A F+L+E+ LAL +A
Sbjct: 219 LKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSASGIKEACRFYLIESGLALMVA 278
Query: 305 LLVNVAIVSISGTIC-ANNLSFADXXXXXXXXXXXXYVLLKNILGKSSSTVYGVALLVSG 363
L+NV+++S+SG +C A NLS D LL+N++GK SS ++ +ALL SG
Sbjct: 279 FLINVSVISVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLASG 338
Query: 364 QSCMVATSYAGQYIMQGFSGMR--KCIIYLVAPCFTLLPSLIICSIGGTLRVHRIINIAA 421
QS + +YAGQY+MQGF +R + L+ C ++PSLI+ IGG+ ++I IA+
Sbjct: 339 QSSTITGTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIIIAS 398
Query: 422 IVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVIIGINIYFFCTSFVAWL 481
++LSF LPFAL+PL+KF+S T +G + N +I + W++ +I+GINIY+ +SF+ L
Sbjct: 399 MILSFELPFALVPLLKFTSCKTKMGSHVNPMAITALTWVIGGLIMGINIYYLVSSFIKLL 458
Query: 482 VHSDLPRVVNAIISSLVFPFMXXXXXXXXXXXFRKVNLSDPFPTNSVSGEIE 533
+HS + ++ L F + FRK ++ + S +E
Sbjct: 459 IHSHMKLILVVFCGILGFAGIALYLAAIAYLVFRKNRVATSLLISRDSQNVE 510
>AT1G15960.1 | chr1:5482202-5485066 REVERSE LENGTH=528
Length = 527
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/425 (45%), Positives = 293/425 (68%), Gaps = 3/425 (0%)
Query: 65 QAPTWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFIFVLTVQSLA 124
+ +WK F +++GPGF++SIAY+DP N +TDL +G+ ++Y LLW++L L +QSLA
Sbjct: 31 EKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLA 90
Query: 125 ANLGIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLHIPFWA 184
ANLG++TG+HLAE C EY K + LW++AE+ V+A IP V+GTA A NML +IP W
Sbjct: 91 ANLGVVTGKHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFNIPVWI 150
Query: 185 GVLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPAGGVIEGLFIPR 244
GVL G T ++L LQ YG RK+EF I+ L+ +A CFF+EL P V+ GLF+P+
Sbjct: 151 GVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTIALCFFVELHYSKPDPKEVLYGLFVPQ 210
Query: 245 PKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGRKDASTFFLLENALALFIA 304
KG+ +T A+++ G++V+PHNLFLHS+LVL+RK+P + G K+A ++L+E+ LAL +A
Sbjct: 211 LKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVTGIKEACRYYLIESGLALMVA 270
Query: 305 LLVNVAIVSISGTIC-ANNLSFADXXXXXXXXXXXXYVLLKNILGKSSSTVYGVALLVSG 363
L+NV+++S+SG +C A++LS D LL+N++GK SS ++ +ALL SG
Sbjct: 271 FLINVSVISVSGAVCNASDLSPEDRASCQDLDLNKASFLLRNVVGKWSSKLFAIALLASG 330
Query: 364 QSCMVATSYAGQYIMQGFSGMR--KCIIYLVAPCFTLLPSLIICSIGGTLRVHRIINIAA 421
QS + +YAGQY+MQGF +R + + C ++PSLI+ IGG+ ++I IA+
Sbjct: 331 QSSTITGTYAGQYVMQGFLDLRLEPWLRNFLTRCLAIIPSLIVALIGGSAGAGKLIIIAS 390
Query: 422 IVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVIIGINIYFFCTSFVAWL 481
++LSF LPFAL+PL+KF+SS T +G + N+ I + WI+ +I+GINIY+ +SF+ L
Sbjct: 391 MILSFELPFALVPLLKFTSSKTKMGSHANSLVISSVTWIIGGLIMGINIYYLVSSFIKLL 450
Query: 482 VHSDL 486
+HS +
Sbjct: 451 LHSHM 455
>AT1G47240.1 | chr1:17309043-17311308 REVERSE LENGTH=531
Length = 530
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 245/434 (56%), Gaps = 28/434 (6%)
Query: 62 GDVQAP-TWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFIFVLTV 120
GD P +W++ GPGF++SIA+LDP NL+ DL AG+ YSLLW+L++ L +
Sbjct: 57 GDTPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLI 116
Query: 121 QSLAANLGIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLH- 179
Q L+A +G+ TGRHLAELC EYP + +Y LW +AEL +I A I V+G+A+A +L
Sbjct: 117 QMLSARVGVATGRHLAELCRDEYPTWARYVLWSMAELALIGADIQEVIGSAIAIQILSRG 176
Query: 180 -IPFWAGVLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPAGGVIE 238
+P WAGV+ + FL L L+ YG RK+E +VL+ M F G+ P ++
Sbjct: 177 FLPLWAGVVITASDCFLFLFLENYGVRKLEAVFAVLIATMGLSFAWMFGETKPSGKELMI 236
Query: 239 GLFIPRPKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGR-KDASTFFLLEN 297
G+ +PR + AV + G +++PHN+FLHS+LV +RK+ K R ++A ++L+E+
Sbjct: 237 GILLPRLSSK-TIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKRKSRVQEALNYYLIES 295
Query: 298 ALALFIALLVNVAIVSI-----SGTICANNLSFADXXXXXXXXXXXXYVLLKNILGKSSS 352
++ALFI+ ++N+ + ++ GT ANN+ + L+ G
Sbjct: 296 SVALFISFMINLFVTTVFAKGFYGTEKANNIGLVNAGQY-----------LQEKFGGGLL 344
Query: 353 T---VYGVALLVSGQSCMVATSYAGQYIMQGFSGMR--KCIIYLVAPCFTLLPSLIICSI 407
++G+ LL +GQS + +YAGQ+IM GF +R K + ++ ++P++I+ +
Sbjct: 345 PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRAVITRSCAIVPTMIVAIV 404
Query: 408 GGTLRVH-RIINIAAIVLSFV-LPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVI 465
T ++N VL V +PFAL+PL+ S +G +K + RIAW ++ ++
Sbjct: 405 FNTSEASLDVLNEWLNVLQSVQIPFALLPLLTLVSKEEIMGDFKIGPILQRIAWTVAALV 464
Query: 466 IGINIYFFCTSFVA 479
+ IN Y FV+
Sbjct: 465 MIINGYLLLDFFVS 478
>AT2G23150.1 | chr2:9856422-9858565 REVERSE LENGTH=510
Length = 509
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 238/433 (54%), Gaps = 19/433 (4%)
Query: 56 QHGGLHGDVQAPTWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFI 115
+HG G +WK+ GPGF++SIA+LDP NL+ DL AG+ YSLLW+L++
Sbjct: 40 EHGVGCGGAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATA 99
Query: 116 FVLTVQSLAANLGIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYN 175
L VQ L+A LG+ TGRHLAELC EYP + + LW++AEL +I + I V+G+A+A
Sbjct: 100 MGLLVQLLSARLGVATGRHLAELCRDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIK 159
Query: 176 MLLH--IPFWAGVLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPA 233
+L + +P WAGV+ F+ L L+ YG RK+E +VL+ M F G+ P
Sbjct: 160 ILSNGILPLWAGVVITALDCFVFLFLENYGIRKLEAVFAVLIATMGVSFAWMFGQAKPSG 219
Query: 234 GGVIEGLFIPRPKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGR-KDASTF 292
++ G+ +P+ + AV + G +++PHN+FLHS+LV +R++ K R ++A +
Sbjct: 220 SELLIGILVPKLS-SRTIQKAVGVVGCIIMPHNVFLHSALVQSREVDKRQKYRVQEALNY 278
Query: 293 FLLENALALFIALLVNVAIVSISGTICANNLSFADXXXXXXXXXXXXYVLLKNILGKSSS 352
+ +E+ +ALFI+ L+N+ + T+ A D Y+ K G
Sbjct: 279 YTIESTIALFISFLINLFVT----TVFAKGFYNTDLANSIGLVNAGQYLQEKYGGGVFPI 334
Query: 353 T-VYGVALLVSGQSCMVATSYAGQYIMQGFSG--MRKCIIYLVAPCFTLLPSLIIC---- 405
++ + LL +GQS + +YAGQ+IM GF M+K + L+ ++P++I+
Sbjct: 335 LYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFD 394
Query: 406 SIGGTLRV-HRIINIAAIVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLV 464
S TL V + +N ++ S +PFALIPL+ S +G +K IAW+++ +
Sbjct: 395 SSEATLDVLNEWLN---VLQSIQIPFALIPLLCLVSKEQIMGSFKIGPLYKTIAWLVAAL 451
Query: 465 IIGINIYFFCTSF 477
+I IN Y F
Sbjct: 452 VIMINGYLLLEFF 464
>AT5G67330.1 | chr5:26861822-26863580 FORWARD LENGTH=513
Length = 512
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 234/422 (55%), Gaps = 21/422 (4%)
Query: 68 TWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFIFVLTVQSLAANL 127
+WK+ GPGF++SIA+LDP NL++DL AG+ YSL+W+L++ L +Q L+A L
Sbjct: 48 SWKKLWLFTGPGFLMSIAFLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARL 107
Query: 128 GIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLH--IPFWAG 185
G+ TGRHLAELC EYP + + LW++AE+ +I A I V+G+A+A +L + +P WAG
Sbjct: 108 GVATGRHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAG 167
Query: 186 VLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPAGGVIEGLFIPRP 245
V+ F+ L L+ YG RK+E ++L+ MA F G+ P ++ G +P+
Sbjct: 168 VVITALDCFIFLFLENYGIRKLEAVFAILIATMALAFAWMFGQTKPSGTELLVGALVPK- 226
Query: 246 KGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGR-KDASTFFLLENALALFIA 304
+ AV + G +++PHN+FLHS+LV +R++ + R K+A ++ +E+ AL ++
Sbjct: 227 LSSRTIKQAVGIVGCIIMPHNVFLHSALVQSREVDPKKRFRVKEALKYYSIESTGALAVS 286
Query: 305 LLVNVAIVSI-----SGTICANNLSFADXXXXXXXXXXXXYVLLKNILGKSSSTVYGVAL 359
++NV + ++ GT A+ + A+ + + I + + +
Sbjct: 287 FIINVFVTTVFAKSFYGTEIADTIGLANAGQYLQDKYGGGFFPILYI--------WAIGV 338
Query: 360 LVSGQSCMVATSYAGQYIMQGFSG--MRKCIIYLVAPCFTLLPSLIICSI--GGTLRVHR 415
L +GQS + +YAGQ+IM GF M+K + L+ ++P++I+ + +
Sbjct: 339 LAAGQSSTITGTYAGQFIMGGFLNLKMKKWVRALITRSCAIIPTMIVALVFDSSDSMLDE 398
Query: 416 IINIAAIVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVIIGINIYFFCT 475
+ ++ S +PFA+IPL+ S+ +G +K + I+WI++ ++I IN Y
Sbjct: 399 LNEWLNVLQSVQIPFAVIPLLCLVSNEQIMGSFKIQPLVQTISWIVAALVIAINGYLMVD 458
Query: 476 SF 477
F
Sbjct: 459 FF 460
>AT4G18790.1 | chr4:10317785-10319660 REVERSE LENGTH=531
Length = 530
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 239/429 (55%), Gaps = 31/429 (7%)
Query: 68 TWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFIFVLTVQSLAANL 127
+W + GPGF++SIA+LDP N++ DL AG+ YSLLW+LL+ + L +Q L+A +
Sbjct: 66 SWAKLWKFTGPGFLMSIAFLDPGNIEGDLQAGAVAGYSLLWLLLWATLMGLLMQLLSARI 125
Query: 128 GIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLH--IPFWAG 185
G+ TGRHLAE+C EYP + + LW +AE+ +I A I V+G+A+A +L +P W G
Sbjct: 126 GVATGRHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIALQILTRGFLPIWVG 185
Query: 186 VLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPAGGVIEGLFIPRP 245
V+ FLI L+ G RK+E +VL+ MA F + P + G+ IP+
Sbjct: 186 VIITSFDCFLISYLEKCGMRKLEGLFAVLIATMALSFAWMFNETKPSVEELFIGIIIPK- 244
Query: 246 KGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGR-KDASTFFLLENALALFIA 304
G + +AV + G ++ PHN+FLHS+LV +RK R ++A ++ +E++ ALF++
Sbjct: 245 LGSKTIREAVGVVGCVITPHNVFLHSALVQSRKTDPKEINRVQEALNYYTIESSAALFVS 304
Query: 305 LLVNVAIVSI-----SGTICANNLSFADXXXXXXXXXXXXYVLLKNILGKSSSTVY--GV 357
++N+ + ++ GT A+++ + Y L + G +Y G+
Sbjct: 305 FMINLFVTAVFAKGFYGTKQADSIGLVN----------AGYYLQEKYGGGVFPILYIWGI 354
Query: 358 ALLVSGQSCMVATSYAGQYIMQGFSG--MRKCIIYLVAPCFTLLPSLIIC----SIGGTL 411
LL +GQS + +YAGQ+IM+GF M + + + F ++P++ + + G+L
Sbjct: 355 GLLAAGQSSTITGTYAGQFIMEGFLDLQMEQWLSAFITRSFAIVPTMFVAIMFNTSEGSL 414
Query: 412 RV-HRIINIAAIVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVIIGINI 470
V + +N I+ S +PFA+IPL+ S+ +G +K S+ ++AW +++ ++ IN
Sbjct: 415 DVLNEWLN---ILQSMQIPFAVIPLLTMVSNEHIMGVFKIGPSLEKLAWTVAVFVMMING 471
Query: 471 YFFCTSFVA 479
Y F+A
Sbjct: 472 YLLLDFFMA 480
>AT5G03280.1 | chr5:788589-793066 FORWARD LENGTH=1295
Length = 1294
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 192/429 (44%), Gaps = 58/429 (13%)
Query: 70 KRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWV-LLFGFIFVLTVQSLAANLG 128
+R + + P ++S+ Y+DP ++ G+ Y L+ + LLF F +L Q +AA +
Sbjct: 16 QRMVPALLPVLLVSVGYIDPGKWVANIEGGARFGYDLVAITLLFNFAAIL-CQYVAARIS 74
Query: 129 IITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLHIPFWAGVLA 188
++TG+HLA++C EY K+ L + AE I + V+G A A N+L + GV
Sbjct: 75 VVTGKHLAQICNEEYDKWTCMFLGIQAEFSAILLDLTMVVGVAHALNLLFGVELSTGVFL 134
Query: 189 CGACTFLILGLQGYGARKMEFTISV-----LMLVMATCFFMELGKVNPPAGGVIEGLFIP 243
FL + M T+S+ ++L+ + + ++ GV+
Sbjct: 135 AAMDAFLFPVFASFLENGMANTVSIYSAGLVLLLYVSGVLLSQSEIPLSMNGVLT----- 189
Query: 244 RPKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGRKDASTF--------FLL 295
R G+ S + + G+ +VPHN ++HS TS D S+ F +
Sbjct: 190 RLNGE-SAFALMGLLGASIVPHNFYIHSYFAGES----TSSSDVDKSSLCQDHLFAIFGV 244
Query: 296 ENALALFIALLVNVA--IVSISGTICANNLSFADXXXXXXXXXXXXYVLLKNILGKSSST 353
+ L+L +L+N A + +G + L+F D V + ++
Sbjct: 245 FSGLSLVNYVLMNAAANVFHSTGLVV---LTFHDALSLMEQ------VFMSPLI----PV 291
Query: 354 VYGVALLVSGQSCMVATSYAGQYIMQGF------SGMRKCIIYLVAPCFTLLPSLIICSI 407
V+ + L S Q +A ++ G+ ++ F + + + I ++A + P+L
Sbjct: 292 VFLMLLFFSSQITALAWAFGGEVVLHDFLKIEIPAWLHRATIRILA----VAPALYCVWT 347
Query: 408 GGTLRVHRIINIAAIVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVI-- 465
G +++++ ++++ +LP ++IPL + +SS +G +K I ++ L+L
Sbjct: 348 SGADGIYQLLIFTQVLVAMMLPCSVIPLFRIASSRQIMGVHK----IPQVGEFLALTTFL 403
Query: 466 --IGINIYF 472
+G+N+ F
Sbjct: 404 GFLGLNVVF 412
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.142 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,055,519
Number of extensions: 386970
Number of successful extensions: 1187
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1156
Number of HSP's successfully gapped: 7
Length of query: 550
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 446
Effective length of database: 8,255,305
Effective search space: 3681866030
Effective search space used: 3681866030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)