BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0389700 Os01g0389700|AK108444
(240 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192 124 6e-29
AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214 123 9e-29
AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220 121 3e-28
AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214 119 2e-27
AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215 115 3e-26
AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244 111 3e-25
AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185 110 6e-25
AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245 107 7e-24
AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208 105 2e-23
AT4G28485.1 | chr4:14075321-14076011 REVERSE LENGTH=166 56 2e-08
>AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192
Length = 191
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 25/188 (13%)
Query: 58 MASTANLAQLLPTGTVLAYQALSPSFTNHGECN--AANKWLTXXXXXXXXXXSLFFSFTD 115
+ S N A LLPTGT L ++ L PSF+N GECN NK LT F SFTD
Sbjct: 9 LPSAGNFANLLPTGTALIFETLLPSFSNGGECNNKPVNKLLTITLISFCAAACFFSSFTD 68
Query: 116 SVVGQDGKLYYGVATRRGLNVFN------------MSREEEEAKKLSHSELRLRPLDFVH 163
S VGQDG++YYG+AT GL++ N ++ ++ E KLS +DFVH
Sbjct: 69 SYVGQDGRIYYGIATSNGLHILNDYPDEGYDPESGLTADKRERYKLSF-------VDFVH 121
Query: 164 SFFTAMVFLTVAFSDVGLQNCFFGQNP----GGNTKELLKNLPLGMAFLSSFVFLIFPTK 219
+F + +VFL +A + C ++ GG+ ++K + + ++SF F IFP+K
Sbjct: 122 AFVSVIVFLALAVESSDFRRCLLPEDDENSWGGHFVLMIKYFAVMVLTMASFFFAIFPSK 181
Query: 220 RKGIGYND 227
R+GIG +D
Sbjct: 182 RRGIGISD 189
>AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214
Length = 213
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 4/169 (2%)
Query: 58 MASTANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSV 117
+ S ANLA LLPTGT+LA+ L P FT++G C+ + LT SFTDSV
Sbjct: 39 LTSAANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTQVLTIVLLTLLSISCFLSSFTDSV 98
Query: 118 VGQDGKLYYGVATRRGLNVFNMSREEEEAKKLSH-SELRLRPLDFVHSFFTAMVFLTVAF 176
+DG +YYG ATR+G+ VF+ + + L + S+ R+R +D++H+ + +VF VA
Sbjct: 99 KAEDGNVYYGFATRKGMWVFDY--PDPDGLGLPNLSKYRIRIIDWIHAVLSVLVFGAVAL 156
Query: 177 SDVGLQNCFFGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIGY 225
D +CF+ P TK++L +P+G+ + +FL+FP +R GIGY
Sbjct: 157 RDKNAVSCFY-PAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGY 204
>AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220
Length = 219
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
Query: 58 MASTANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSV 117
+ S ANL+ LLPTGT+LA+Q L+P FT++G C+ A ++LT SFTDSV
Sbjct: 45 LTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAASCFVSSFTDSV 104
Query: 118 VGQDGKLYYGVATRRGLNVFNMSREEEEAKKLSHSELRLRPLDFVHSFFTAMVFLTVAFS 177
DG +Y+G T +G+ V + + ++ R+R +D++H+ + +VF VA
Sbjct: 105 KADDGTIYFGFVTFKGMWVVDYP-DPSGLGLPDLAKYRMRFVDWIHATLSVLVFGAVALR 163
Query: 178 DVGLQNCFFGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIGY 225
D + +CF+ +P TK +L +P+G+ + S +F++FP +R GIGY
Sbjct: 164 DKYITDCFY-PSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGY 210
>AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214
Length = 213
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 60 STANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSVVG 119
+TA+LA LLPTGTVLA+Q LSP F+N G+C+ +K +T SFTDS
Sbjct: 47 TTAHLANLLPTGTVLAFQLLSPIFSNGGQCDLVSKIMTSTLVAICGFSCFILSFTDSYKD 106
Query: 120 QDGKLYYGVATRRGLNVFNMSRE--EEEAKKLSHSELRLRPLDFVHSFFTAMVFLTVAFS 177
++G + YG+AT G + + S +E +K+ +LR +DFVH+F + VF V
Sbjct: 107 KNGTICYGLATIHGFWIIDGSTTLPQELSKR-----YKLRFIDFVHAFMSLFVFGAVVLF 161
Query: 178 DVGLQNCFFGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIGY 225
D NCFF +P E+L LP+G+ SS +F FPT R GIG+
Sbjct: 162 DRNAVNCFF-PSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGIGF 208
>AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215
Length = 214
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 60 STANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSVVG 119
+TANLA LLPTGTVLA+Q LSP TN G C+ ++++T SFTDS
Sbjct: 48 TTANLANLLPTGTVLAFQILSPICTNVGRCDLTSRFMTALLVSICGFSCFILSFTDSYKD 107
Query: 120 QDGKLYYGVATRRGLNVFNMSREEEEAKKLSHSELRLRPLDFVHSFFTAMVFLTVAFSDV 179
+G + YG AT G + + S ++LS S +LR +DFVH+ + +VF V D
Sbjct: 108 LNGSVCYGFATIHGFWIIDGS--ATLPQELSKS-YKLRFIDFVHAIMSFLVFGAVVLFDQ 164
Query: 180 GLQNCFFGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIGY 225
+ NCF+ + P ELL LP+ + S VF FPT R GIG+
Sbjct: 165 NVVNCFYPE-PSAEVVELLTTLPVAVGVFCSMVFAKFPTTRHGIGF 209
>AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244
Length = 243
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 14/178 (7%)
Query: 58 MASTANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSV 117
++ T+ L LPTGT+L ++ + P+ G+CN N + FF FTDS
Sbjct: 65 VSKTSMLVNFLPTGTLLMFEMVLPTIYRDGDCNGINTLMIHLLLLLCAMSCFFFHFTDSF 124
Query: 118 VGQDGKLYYGVATRRGLNVFNMSREE---------EEAKKLSHSELRLRPLDFVHSFFTA 168
DGK+YYG T RGL VF E+ ++ +LR DFVHS +
Sbjct: 125 KASDGKIYYGFVTPRGLAVFMKPPSPGFGGGDVIAEKEIPVTDERYKLRVNDFVHSVMSV 184
Query: 169 MVFLTVAFSDVGLQNCFFGQNPGGNTK--ELLKNLPLGMAFLSSFVFLIFPTKRKGIG 224
+VF+ +AFSD + C F PG + +++++ PL + + S +FL+FPT R G+G
Sbjct: 185 LVFMAIAFSDRRVTGCLF---PGKEKEMDQVMESFPLMVGIVCSALFLVFPTSRYGVG 239
>AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185
Length = 184
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 59 ASTANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSVV 118
+ +L +LLPTGTV +Q L+P TN+G C NK+LT F FTDS
Sbjct: 14 SGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINKYLTGVLIVICAFSCCFTCFTDSYR 73
Query: 119 GQDGKLYYGVATRRGLNVFNMSREEEEAKKLSHSELRLRPLDFVHSFFTAMVFLTVAFSD 178
+DG ++YGVAT +GL ++ + S RLR DFVH+FF+ +VF ++ D
Sbjct: 74 TRDGYVHYGVATVKGL--------WPDSSSVDLSSKRLRVGDFVHAFFSLIVFSVISLLD 125
Query: 179 VGLQNCFFGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIGYNDNTPNRKAED 236
NCF+ G K L LP + +S VF +FP++R GIG P+ +ED
Sbjct: 126 ANTVNCFY-PGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIG----NPSDHSED 178
>AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245
Length = 244
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 58 MASTANLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSV 117
++ T+ L LPTGT+L ++ + PS G+CN N + FF FTDS
Sbjct: 66 VSKTSMLVNFLPTGTLLMFEMVLPSIYRDGDCNGINTLMIHLLLLLCAMSCFFFHFTDSF 125
Query: 118 VGQDGKLYYGVATRRGLNVFNMSREEE--------EAK-KLSHSELRLRPLDFVHSFFTA 168
DGK+YYG T RGL VF E EA+ ++ +L DFVH+ +
Sbjct: 126 KASDGKIYYGFVTPRGLAVFMKPPPPEFGGGDVIAEAEIPVTDDRYKLTVNDFVHAVMSV 185
Query: 169 MVFLTVAFSDVGLQNCFFGQNPGGNTK--ELLKNLPLGMAFLSSFVFLIFPTKRKGIG 224
+VF+ +AFSD + C F PG + +++++ P+ + + S +FL+FPT R G+G
Sbjct: 186 LVFMAIAFSDRRVTGCLF---PGKEKEMDQVMESFPIMVGIVCSALFLVFPTTRYGVG 240
>AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208
Length = 207
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 63 NLAQLLPTGTVLAYQALSPSFTNHGECNAANKWLTXXXXXXXXXXSLFFSFTDSVVGQDG 122
+L +LLPTGT+ Y L+P TN GEC+ NK ++ +F FTDS G DG
Sbjct: 32 SLIKLLPTGTLFIYLLLNPVLTNDGECSTGNKVMSSILVALCSFSCVFSCFTDSFKGVDG 91
Query: 123 KLYYGVATRRGLNVFNMSREEEEAKKLSHSELRLRPLDFVHSFFTAMVFLTVAFSDVGLQ 182
+G+ T++GL + E + S+ +LR DFVH+ F VF T+ D
Sbjct: 92 SRKFGIVTKKGLWTY------AEPGSVDLSKYKLRIADFVHAGFVLAVFGTLVLLDANTA 145
Query: 183 NCFFGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIGYNDNTPNRKAEDVTKN 240
+CF+ + K L+ LP + S+ +F +FP+KR GIGY AE+ TK
Sbjct: 146 SCFYPRFR-ETQKTLVMALPPAVGVASATIFALFPSKRSGIGYAPIAEEVGAEEETKK 202
>AT4G28485.1 | chr4:14075321-14076011 REVERSE LENGTH=166
Length = 165
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 126 YGVATRRGLNVFNMSREEEEAKKLSHSELRLRPLDFVHSFFTAMVFLTVAFSDVGLQNCF 185
YG+AT GL V + S E +K + L DF+H+ + +VF V+ D + C
Sbjct: 65 YGLATWSGLLVMDGSITLTEEEKEKYKLKIL---DFIHAIMSMLVFFAVSMFDQNVTRCL 121
Query: 186 FGQNPGGNTKELLKNLPLGMAFLSSFVFLIFPTKRKGIG 224
F P TKE+L +LP + + FL FPT+R GIG
Sbjct: 122 F-PVPSEETKEILTSLPFVIGVICGAFFLAFPTRRHGIG 159
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,671,666
Number of extensions: 167630
Number of successful extensions: 418
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 10
Length of query: 240
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 144
Effective length of database: 8,474,633
Effective search space: 1220347152
Effective search space used: 1220347152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)