BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0377500 Os01g0377500|AK069233
(427 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26430.1 | chr2:11243433-11245504 REVERSE LENGTH=417 448 e-126
AT4G19600.1 | chr4:10673619-10676532 FORWARD LENGTH=542 147 1e-35
AT5G45190.2 | chr5:18277808-18280733 REVERSE LENGTH=591 135 6e-32
AT1G35440.1 | chr1:13035294-13036037 REVERSE LENGTH=248 124 7e-29
AT1G27630.1 | chr1:9611647-9613967 FORWARD LENGTH=318 111 8e-25
AT4G19560.1 | chr4:10661904-10664369 FORWARD LENGTH=461 110 1e-24
AT5G48640.1 | chr5:19723653-19725641 REVERSE LENGTH=254 65 6e-11
AT5G48630.2 | chr5:19721663-19723119 REVERSE LENGTH=257 59 4e-09
>AT2G26430.1 | chr2:11243433-11245504 REVERSE LENGTH=417
Length = 416
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/301 (69%), Positives = 244/301 (81%), Gaps = 6/301 (1%)
Query: 1 MIYTAIDTFYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQ 60
MIYTAID FYL+DEQL+ SPSRKDGIDE TE +LR+YGCDLIQE GILLKLPQAVMAT Q
Sbjct: 1 MIYTAIDNFYLSDEQLKASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQ 60
Query: 61 VLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHL 120
VLF RFYCKKS +F VK VAASCVWLA KLEE+P++++ +IIVFHRMECRREN+P+EHL
Sbjct: 61 VLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHL 120
Query: 121 DVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEA-PELTQEAWNLAN 179
D+++KK+S+LK +L RTERH+LKEMGF+CHVEHPHKFISNYLATLE PEL QEAWNLAN
Sbjct: 121 DMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLAN 180
Query: 180 DSLRTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDADEAGIQEVCRVLAHLY 239
DSLRTTLCVRF+SEVVACGVVYAAARR VPLPE+PPWW FDAD++ I EVCRVLAHLY
Sbjct: 181 DSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDEVCRVLAHLY 240
Query: 240 SLPKSQYIQVYKDNDSFTHRRTSDTNASKES-----PATTVASDKGTPVPSSSSQEKDAL 294
SLPK+QYI V KD FT S + + + P A D S+++ KD +
Sbjct: 241 SLPKAQYISVCKDGKPFTFSSRSGNSQGQSATKDLLPGAGEAVDTKCTAGSANNDLKDGM 300
Query: 295 I 295
+
Sbjct: 301 V 301
>AT4G19600.1 | chr4:10673619-10676532 FORWARD LENGTH=542
Length = 541
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 136/249 (54%), Gaps = 10/249 (4%)
Query: 9 FYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFYC 68
++ E +SPSR D ID ET LR C +Q+ G+ LK+PQ +ATA + HRF+
Sbjct: 34 YFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFI 93
Query: 69 KKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKK-Y 127
++S R + +A C++LAGK+EE+PR K +I+V + + +++ P + K+ Y
Sbjct: 94 RQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKD--PTTAQKIKQKEVY 151
Query: 128 SDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAPE--LTQEAWNLANDSLRTT 185
K ++ E+ +L +GF +V HP+K + + + + L Q AWN ND LRT+
Sbjct: 152 EQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTS 211
Query: 186 LCVRFKSEVVACGVVYAAARRHGVPLPEDPP--WWNVFDADEAGIQEVCRVLAHLYS--- 240
LC++FK +A G ++ AA+ V LP D WW FD +++V + LY
Sbjct: 212 LCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNR 271
Query: 241 LPKSQYIQV 249
+P SQ +V
Sbjct: 272 VPASQVSEV 280
>AT5G45190.2 | chr5:18277808-18280733 REVERSE LENGTH=591
Length = 590
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 139/277 (50%), Gaps = 21/277 (7%)
Query: 9 FYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLP-----------QAVMA 57
++ E +SPSR DGID ET LR C +Q+ G+ LKL +A
Sbjct: 34 YFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKLAWFLDIIAYVCTDVTIA 93
Query: 58 TAQVLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPI 117
TA + HRF+ ++S + + +A C++LAGK+EE+PR K +I V + + +++ P
Sbjct: 94 TAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKD--PG 151
Query: 118 EHLDVFSKK-YSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAPE--LTQEA 174
+ K+ Y K ++ E+ +L +GF +V HP+K + + + + L Q A
Sbjct: 152 ASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQVA 211
Query: 175 WNLANDSLRTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPP--WWNVFDADEAGIQEVC 232
WN ND LRT+LC++FK +A G ++ AA+ V LP D WW FD +++V
Sbjct: 212 WNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVS 271
Query: 233 RVLAHLYS---LPKSQYIQVYKDNDSFTHRRTSDTNA 266
+ LY +P SQ +V + +R NA
Sbjct: 272 NQMLELYEQNRVPASQGSEVESSVGGGSAQRPGSRNA 308
>AT1G35440.1 | chr1:13035294-13036037 REVERSE LENGTH=248
Length = 247
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 15/238 (6%)
Query: 9 FYLTDEQL-RDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFY 67
+Y T E + + SPSR DGI+ ET R +QE G L PQ +ATA VL RF+
Sbjct: 7 WYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFF 66
Query: 68 CKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKKY 127
++S + K VA C+++AGK+E SPR + ++ V +R+ +E P+ DVF +
Sbjct: 67 TRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKE--PLR--DVFER-- 120
Query: 128 SDLKHDLVRTERHLLKEMGFICHVEHPHKFISNY----LATLEAPELTQEAWNLANDSLR 183
LK ++ E+ +L + +EHP+K + ++ + T + L Q A+N NDSLR
Sbjct: 121 --LKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLR 178
Query: 184 TTLCVRFKSEVVACGVVYAAARRHGVPLP--EDPPWWNVFDADEAGIQEVCRVLAHLY 239
T+LC++F +A +Y + LP D WW FD + + E+C + LY
Sbjct: 179 TSLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTKRQLWEICDQMLDLY 236
>AT1G27630.1 | chr1:9611647-9613967 FORWARD LENGTH=318
Length = 317
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 120/234 (51%), Gaps = 9/234 (3%)
Query: 9 FYLTDEQL-RDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFY 67
+Y + E++ R SPSRKDGID E+ LR C +Q G+ L + Q ++ A V+ HRFY
Sbjct: 34 WYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFY 93
Query: 68 CKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKK- 126
++S + + +A S ++LA K E+ P + +++ + E E P + + +
Sbjct: 94 MRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASY--EIIYEWDPSASIRIHQTEC 151
Query: 127 YSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEA-PELTQEAWNLANDSLRTT 185
Y + K ++ E LL F +E P+K ++ L L A P+L AWN +D +RTT
Sbjct: 152 YHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPDLATAAWNFVHDWIRTT 211
Query: 186 LCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDAD----EAGIQEVCRVL 235
LC+++K V+A V+ AA + WW F + IQE+C ++
Sbjct: 212 LCLQYKPHVIATATVHLAATFQNAKVGSRRDWWLEFGVTTKLLKEVIQEMCTLI 265
>AT4G19560.1 | chr4:10661904-10664369 FORWARD LENGTH=461
Length = 460
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 9 FYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFYC 68
F+ +E R+SPSR+DGID TET LR C ++ G LK+PQ +ATA HRF+
Sbjct: 32 FFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFL 91
Query: 69 KKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKKYS 128
++S + + +A C+ LAGK+EE+P + +II + +++ + +V+ ++
Sbjct: 92 RQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQRKEVYDQQ-- 149
Query: 129 DLKHDLVRTERHLLKEMGFICHVEHPHK----FISNYLATLEAPELTQEAWNLANDSLRT 184
K ++ E +L + F + HP+K I Y+ +L Q AWN ND LRT
Sbjct: 150 --KELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRT 207
Query: 185 TLCVRFK 191
TLC++++
Sbjct: 208 TLCLQYQ 214
>AT5G48640.1 | chr5:19723653-19725641 REVERSE LENGTH=254
Length = 253
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 49 LKLPQAVMATAQVLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRM 108
+K+ Q V+ATA R Y +KS V F + VA +C++LA K EES ++++++ R+
Sbjct: 55 IKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRL 114
Query: 109 ECRRENVPIEHLDVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYL--ATLE 166
P E+ KY +LK D++ E +L+ + + V HP++ +S +L A L
Sbjct: 115 ------YPDEY-----NKY-ELK-DILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALN 161
Query: 167 APELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAA 204
+ Q W + ND+ + L + +A +Y A+
Sbjct: 162 DVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIAS 199
>AT5G48630.2 | chr5:19721663-19723119 REVERSE LENGTH=257
Length = 256
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 9 FYLTDEQLRDSPS--------RKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQ 60
FY ++L+D + GI ++++ + I + +K+ Q V+ATA
Sbjct: 10 FYFHSKELKDPEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAV 69
Query: 61 VLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHL 120
R Y +KS + + VA +C++LA K EES +K ++VF+
Sbjct: 70 TYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAK--LLVFY-------------- 113
Query: 121 DVFSKKYSDLKH-----DLVRTERHLLKEMGFICHVEHPHKFISNYL--ATLEAPELTQE 173
K Y+D K D++ E +L+ + F V HP++ + +L + + +T
Sbjct: 114 --MKKLYADEKFRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEFLQDSGINDTSMTHL 171
Query: 174 AWNLANDSLRTTLCVRFKSEVVACGVVYAAA 204
W L ND+ R L + ++ +Y A+
Sbjct: 172 TWGLVNDTYRMDLILIHPPFLITLACIYIAS 202
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,659,696
Number of extensions: 306746
Number of successful extensions: 818
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 803
Number of HSP's successfully gapped: 8
Length of query: 427
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 326
Effective length of database: 8,337,553
Effective search space: 2718042278
Effective search space used: 2718042278
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)