BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0376700 Os01g0376700|AK071525
(423 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35840.1 | chr2:15053952-15055776 FORWARD LENGTH=423 550 e-157
AT1G51420.1 | chr1:19064852-19066704 REVERSE LENGTH=424 485 e-137
AT3G52340.1 | chr3:19407412-19409182 FORWARD LENGTH=424 464 e-131
AT3G54270.1 | chr3:20087419-20089735 REVERSE LENGTH=426 424 e-119
>AT2G35840.1 | chr2:15053952-15055776 FORWARD LENGTH=423
Length = 422
Score = 550 bits (1418), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/421 (63%), Positives = 316/421 (75%), Gaps = 3/421 (0%)
Query: 1 MDKLSGSARLIIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYK 60
M++L+ RL+IVSDLDHTMVDHHD ENLSLLRF +LWE Y DSLLVFSTGRSPTLYK
Sbjct: 1 MERLTSPPRLMIVSDLDHTMVDHHDPENLSLLRFNSLWEHAYRHDSLLVFSTGRSPTLYK 60
Query: 61 ELRKEKPMLTPDITIMSVGTEITYGEAMVPDDGWEEYLNNKWDRNVVVEETAKFSELKLQ 120
ELRKEKP+LTPDITIMSVGTEITYG +MVPD GW E LNNKWD +V +E + F ELKLQ
Sbjct: 61 ELRKEKPLLTPDITIMSVGTEITYGNSMVPDHGWVEALNNKWDLGIVKQEASNFPELKLQ 120
Query: 121 AQTEQRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKIIYSGGQDLDILPQGAGKGQAL 180
A+TEQRPHKVSF+V+K AQEV K LS K GLDVKIIYSGG DLDILPQGAGKGQAL
Sbjct: 121 AETEQRPHKVSFYVEKSKAQEVTKELSQRFLKRGLDVKIIYSGGMDLDILPQGAGKGQAL 180
Query: 181 AYLLKKLSSCGKPPNNTLVCGDSGNDAELFSIPGVHGVMVSNAQEELLQWYAENAKGNPK 240
AYLLKKL + GK P NTL CGDSGNDAELFSIP V+GVMVSNAQEELL+W+AENAK NPK
Sbjct: 181 AYLLKKLKTEGKLPVNTLACGDSGNDAELFSIPDVYGVMVSNAQEELLKWHAENAKDNPK 240
Query: 241 IIHATERCAAGIIEAIGHFKLGPSVSPRDVG-FPYVKEDHIKPTDAVVKFYVLYEKWRRA 299
+IHA ERCA GII+AIGHFKLGP++SPRDV F +K +++ P VVKF++ YE+WRR
Sbjct: 241 VIHAKERCAGGIIQAIGHFKLGPNLSPRDVSDFLEIKVENVNPGHEVVKFFLFYERWRRG 300
Query: 300 EVPKSDSVVQYFKNITHANGVIIQPSGLECSLHASVDALSSCYGEKQGKKYRTWVDRLFV 359
EV S++ K H GV + PSG E SL ++D L +G+KQGKK+R W D++
Sbjct: 301 EVENSEAYTASLKASVHPGGVFVHPSGTEKSLRDTIDELRKYHGDKQGKKFRVWADQVLA 360
Query: 360 SQSGSDSWLVRFDLWEAEGDARLCCLTSLALNVKPETPAGFLITHVHKTWLKGYSSADEQ 419
+ + +W+V+ D WE +GD R CC T++ K G + HV +TW K D+
Sbjct: 361 TDTTPGTWIVKLDKWEQDGDERRCCTTTVKFTSK--EGEGLVWEHVQQTWSKETMVKDDS 418
Query: 420 S 420
S
Sbjct: 419 S 419
>AT1G51420.1 | chr1:19064852-19066704 REVERSE LENGTH=424
Length = 423
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/411 (58%), Positives = 295/411 (71%), Gaps = 4/411 (0%)
Query: 1 MDKLSGSARLIIVSDLDHTMVDHH-DEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLY 59
M++L+ RL+IVSDLD TMVDHH D ENL+LLRF +LWE Y DSLLVFSTGR+ T+Y
Sbjct: 1 MERLTSPPRLMIVSDLDETMVDHHKDPENLALLRFNSLWEDAYRHDSLLVFSTGRAQTMY 60
Query: 60 KELRKEKPMLTPDITIMSVGTEITYGEAMVPDDGWEEYLNNKWDRNVVVEETAKFSELKL 119
K+LRKEKP+LTPD+ I SVGTEI YG +MVPDD W E LN KWDR +V EET+KF EL L
Sbjct: 61 KKLRKEKPLLTPDVIITSVGTEIAYGNSMVPDDNWVEILNKKWDRGIVQEETSKFPELTL 120
Query: 120 QAQTEQRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKIIYSGGQDLDILPQGAGKGQA 179
Q +TEQRPHK+SF +DK + V K LS +EK G+DVK I+SGG D+L +G GKGQA
Sbjct: 121 QGETEQRPHKLSFNIDKSKVKAVTKELSPRLEKRGVDVKFIFSGGNAFDVLAKGGGKGQA 180
Query: 180 LAYLLKKLSSCGKPPNNTLVCGDSGNDAELFSIPGVHGVMVSNAQEELLQWYAENAKGNP 239
LAYLLKKL + GK P NTL CGDSGND ELF+IP V+GVMVSNAQEELL+WYAENAK N
Sbjct: 181 LAYLLKKLKTEGKLPINTLACGDSGNDTELFTIPNVYGVMVSNAQEELLEWYAENAKDNA 240
Query: 240 KIIHATERCAAGIIEAIGHFKLGPSVSPRDVG-FPYVKEDHIKPTDAVVKFYVLYEKWRR 298
IIHA+ERCA GI +AIGHFKLGP++SPRDV F K D++ P VVKF++ YE+WRR
Sbjct: 241 NIIHASERCAGGITQAIGHFKLGPNLSPRDVSDFLECKADNVNPGHEVVKFFLFYERWRR 300
Query: 299 AEVPKSDSVVQYFKNITHANGVIIQPSGLECSLHASVDALSSCYGEKQGKKYRTWVDRLF 358
EV + K H +GV + PSG E SL ++D L YG+K+GKK+R W D++
Sbjct: 301 GEVENCTTYTSSLKASCHPSGVFVHPSGAEKSLRDTIDELGKYYGDKKGKKFRVWTDQVL 360
Query: 359 VSQSGSDSWLVRFDLWEAEGDARLCCLTSLALNVKPETPAGFLITHVHKTW 409
+ + +W+V+ D WE GD R CC T++ K GF+ HV + W
Sbjct: 361 ATDTTPGTWIVKLDKWEQTGDERKCCTTTVKFTSK--EGEGFVWEHVQQIW 409
>AT3G52340.1 | chr3:19407412-19409182 FORWARD LENGTH=424
Length = 423
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/424 (55%), Positives = 299/424 (70%), Gaps = 7/424 (1%)
Query: 1 MDKLSGSARLIIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYK 60
M++L L+IVSDLDHTMVDH D ENLSLLRF +LWE Y +DSLLVFST RSP LYK
Sbjct: 1 MERLISHPPLMIVSDLDHTMVDHQDHENLSLLRFNSLWEYAYRRDSLLVFSTARSPVLYK 60
Query: 61 ELRKEKPMLTPDITIMSVGTEITYGEAMVPDDGWEEYLNN-KWDRNVVVEETAKFSELKL 119
ELRKEKP+LTPDI I S+GTEI +G +MVPD W E LN+ KW+R +V+EET+KF EL L
Sbjct: 61 ELRKEKPLLTPDIIITSIGTEIAFGNSMVPDHAWVESLNSCKWNREIVLEETSKFPELTL 120
Query: 120 QAQTEQRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKIIYSGGQDLDILPQGAGKGQA 179
Q +TEQR HKVSF++D+ + + K LS +EK GLDVKIIYS G+++D++P+GAGKG+A
Sbjct: 121 QPKTEQRLHKVSFYIDEGKGEALTKELSQLLEKRGLDVKIIYSWGKNVDVIPRGAGKGEA 180
Query: 180 LAYLLKKLSSCGKPPNNTLVCGDSGNDAELFSIPGVHGVMVSNAQEELLQWYAENAKGNP 239
L YLLKKL + G P NTL CGDS +DAELFSIP VHGVMVSN+QEELL+W +ENA N
Sbjct: 181 LEYLLKKLQAEGIFPVNTLACGDSEHDAELFSIPDVHGVMVSNSQEELLKWRSENALNNL 240
Query: 240 KIIHATERCAAGIIEAIGHFKLGPSVSPRDVG-FPYVKEDHIKPTDAVVKFYVLYEKWRR 298
K+IH+TERCA GII+AIGHF LGP +SPRDV F K D++ P VV+FY+ YE+ RR
Sbjct: 241 KVIHSTERCADGIIQAIGHFNLGPDLSPRDVSEFLDRKMDNVNPGHEVVRFYLFYERLRR 300
Query: 299 AEVPKSDSVVQYFKNITHANGVIIQPSGLECSLHASVDALSSCYGEKQGKKYRTWVDRLF 358
E+ ++ + FK+ V+ PSG E SL ++D L CYG+K+GKK+ WVD++
Sbjct: 301 GEIKNYETYIASFKDSCLHAAVLFHPSGAEKSLRDTIDELKKCYGDKRGKKFWVWVDQVL 360
Query: 359 VSQSGSDSWLVRFDLWEAEGDARLCCLTSLALNVKPETPAGFLI-THVHKTWLKGYSSAD 417
V+ + W+V+FD WE D CC T++ K G L+ V + W + D
Sbjct: 361 VTDTIPGKWIVKFDKWEQCEDESQCCKTTVEFTSK----GGDLVWEKVKQIWSEESKVKD 416
Query: 418 EQSS 421
+ SS
Sbjct: 417 DNSS 420
>AT3G54270.1 | chr3:20087419-20089735 REVERSE LENGTH=426
Length = 425
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 287/423 (67%), Gaps = 6/423 (1%)
Query: 1 MDKLSGSARLIIVSDLDHTMVDHHDEENLSLLRFGALWESVYCQDSLLVFSTGRSPTLYK 60
MD+L G RLI+V+DLD T+VDH D EN LLRF ALWE+ Y DSLLV+ TGRS + Y
Sbjct: 1 MDRLEGPPRLILVADLDCTLVDHDDPENNDLLRFNALWEAHYRHDSLLVYCTGRSFSSYS 60
Query: 61 ELRKEKPMLTPDITIMSVGTEITYG--EAMVPDDGWEEYLNNKWDRNVVVEETAKFSELK 118
LRK++P+LTPDI + SVG+EI YG E+ V D W L+ KW+R++VVEET KF +L+
Sbjct: 61 SLRKKRPLLTPDIAVTSVGSEIVYGGGESTVSDVVWTARLDYKWNRDIVVEETLKFPKLE 120
Query: 119 LQAQTEQRPHKVSFFVDKKSAQEVIKSLSGNMEKCGLDVKIIYSGGQDLDILPQGAGKGQ 178
Q Q HKVSFFV ++ A E++K L G +E+ G+DVK++YS G D+LP+GAGK
Sbjct: 121 PQPDKSQEEHKVSFFVGREDAVEIMKVLPGILEERGVDVKLVYSNGYAFDVLPRGAGKQG 180
Query: 179 ALAYLLKKLSSCGKPPNNTLVCGDSGNDAELFSIPGVHGVMVSNAQEELLQWYAENAKGN 238
AL YLL KL GK P+NTLVCGDSGNDAELF+I V+GVMVSN+ EELLQWY ENAK N
Sbjct: 181 ALTYLLDKLDIEGKQPSNTLVCGDSGNDAELFNISDVYGVMVSNSHEELLQWYEENAKDN 240
Query: 239 PKIIHATERCAAGIIEAIGHFKLGPSVSPRDV-GFPYVKEDHIKPTDAVVKFYVLYEKWR 297
PKI HA+ERC AG+IEAI F LGP+VSPRDV + + P VV+FY+ YE+WR
Sbjct: 241 PKIFHASERCGAGMIEAIQRFNLGPNVSPRDVMDTENFHGESLNPAHEVVQFYLFYERWR 300
Query: 298 RAEVPKSDSVVQYFKNITHANGVIIQPSGLECSLHASVDALSSCYGEKQGKKYRTWVDRL 357
EV KSD +Q K+++ G+ + PSG+E +H +D + + YG+ + KK+R W+D +
Sbjct: 301 CGEVEKSDKYLQNLKSLSSPLGIFVHPSGVEKPIHEWIDEMENLYGDGKEKKFRIWLDNV 360
Query: 358 FVSQSGSDSWLVRFDLWE-AEGDARLCCLTSLALNVKPETPAGFLITHVHKTWLKGYSSA 416
S SD+WL +F E +EG R C T + L+ K E H+H++WL SS
Sbjct: 361 TSSHISSDTWLAKFVKHELSEGKVR-SCSTKVLLSYKEEKQR-LTWMHIHQSWLDESSSD 418
Query: 417 DEQ 419
D++
Sbjct: 419 DQE 421
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,087,350
Number of extensions: 443966
Number of successful extensions: 1034
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1027
Number of HSP's successfully gapped: 4
Length of query: 423
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 322
Effective length of database: 8,337,553
Effective search space: 2684692066
Effective search space used: 2684692066
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)