BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0374900 Os01g0374900|AK067148
(313 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53410.1 | chr3:19801175-19802274 REVERSE LENGTH=300 232 2e-61
AT3G09770.1 | chr3:2996402-2997835 REVERSE LENGTH=389 230 6e-61
AT5G03200.1 | chr5:760450-761667 REVERSE LENGTH=338 217 6e-57
AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379 192 2e-49
AT3G06140.1 | chr3:1856993-1858777 REVERSE LENGTH=360 184 5e-47
AT1G54150.1 | chr1:20215480-20217303 FORWARD LENGTH=384 53 2e-07
AT2G21380.1 | chr2:9141833-9148883 FORWARD LENGTH=1059 50 1e-06
AT2G38185.4 | chr2:16000155-16002699 FORWARD LENGTH=448 50 2e-06
AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400 50 2e-06
AT4G39050.1 | chr4:18193462-18200148 FORWARD LENGTH=1056 49 3e-06
AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405 49 4e-06
AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653 48 6e-06
AT4G24204.3 | chr4:12562069-12562815 REVERSE LENGTH=179 48 7e-06
>AT3G53410.1 | chr3:19801175-19802274 REVERSE LENGTH=300
Length = 299
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 156/249 (62%), Gaps = 9/249 (3%)
Query: 52 HVERHRAVAVSVGVNVKGDTLRLVPXXXXXXGRSLLLAFSFDADGPGSITVCFFAQEDK- 110
+VE AV + +N+K +TLRL P LL+F+FDA PGSITV FFA+E K
Sbjct: 54 YVEHQEAVTIRNDINLKKETLRLEPDEQNPG--KFLLSFTFDASVPGSITVMFFAKEGKD 111
Query: 111 CALKTAKENLLQPVTVPFKEGRGQEFKQPSGSGIDVSRFEESELTNVGEGGVFPVAFKVQ 170
C L KE+L V F +G Q FKQ G+GID S E++L E V+ VA K +
Sbjct: 112 CNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEANETDVYHVAVKAE 171
Query: 171 MDVSGNQESEGAHETEQSKYLVKYAIFVKKDNAEYGVHVVQQILWVNGIRYVLQEIYGIG 230
+ VS + E Q + + + K EY VV+QILWVNG RYVLQEIYGIG
Sbjct: 172 V-VSEDDHPESGTPNRQ----ITHVVLEKDHKGEYKARVVKQILWVNGNRYVLQEIYGIG 226
Query: 231 NTADKNAHE-DDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPVE 289
NT D N + ++ GKECV+CLSEPRDT VLPCRHMC+C CA++L++QTN CPICRQPV+
Sbjct: 227 NTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVD 286
Query: 290 GLREIEVDN 298
L EI V+N
Sbjct: 287 RLLEITVNN 295
>AT3G09770.1 | chr3:2996402-2997835 REVERSE LENGTH=389
Length = 388
Score = 230 bits (587), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/251 (49%), Positives = 168/251 (66%), Gaps = 10/251 (3%)
Query: 52 HVERHRAVAVSVGVNVKGDTLRLVPXXXXXXGRSLLLAFSFDADGPGSITVCFFAQE-DK 110
+VE +AV + VN+K ++LRL P GR L++F+FDA G I+V FFA+E +
Sbjct: 123 YVEHQKAVTIRNDVNLKKESLRLEPDPDNP-GR-FLVSFTFDATVSGRISVIFFAKESED 180
Query: 111 CALKTAKENLLQPVTVPFKEGRGQEFKQPSGSGIDVSRFEESELTNVG-EGGVFPVAFKV 169
C L KE++L P+T+ F++G GQ+FKQ SGSGID S FE+ EL + ++P+A K
Sbjct: 181 CKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVKA 240
Query: 170 QMDVSGNQESEGAHETEQSKYLVKYAIFVKKDNAEYGVHVVQQILWVNGIRYVLQEIYGI 229
+ SG + E ++ + + A++ +KD E + VV+QILWVNG RY LQEIYGI
Sbjct: 241 EAAPSGGENEEEERSGSKNAQITQ-AVY-EKDKGEIKIRVVKQILWVNGTRYELQEIYGI 298
Query: 230 GNTAD----KNAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICR 285
GNT + +D GKECV+CLSEPRDT VLPCRHMC+C CA+VL++QTN+CPICR
Sbjct: 299 GNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICR 358
Query: 286 QPVEGLREIEV 296
QPVE L EI+V
Sbjct: 359 QPVERLLEIKV 369
>AT5G03200.1 | chr5:760450-761667 REVERSE LENGTH=338
Length = 337
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 151/241 (62%), Gaps = 16/241 (6%)
Query: 56 HRAVAVSVGVNVKGDTLRLVPXXXXXXGRSLLLAFSFDADGPGSITVCFFAQED-KCALK 114
+AV + VN+K TL L+P LL++F+FDA PG ITV FFA ED +C L+
Sbjct: 107 QKAVTIRNDVNLKKKTLTLIPDPENP--NRLLVSFTFDASMPGRITVVFFATEDAECNLR 164
Query: 115 TAKENLLQPVTVPFKEGRGQEFKQPSGSGIDVSRFEESELTNVGEGGVFPVAFKVQMDVS 174
KE+ L P+T F EG GQ+F Q SG+GID++ F++SEL + VFP+A K
Sbjct: 165 ATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFKEVDTDVFPLAVKA----- 219
Query: 175 GNQESEGAHETEQSKYLVKYA-IFVKKDNAEYGVHVVQQILWVNGIRYVLQEIYGIGNTA 233
E+ A E + V+ + K+ E + VV+QILWVN RY L EIYGI NT
Sbjct: 220 ---EATPAEEGKSGSTNVQITQVVYTKEKGEIKIEVVKQILWVNKRRYELLEIYGIENTV 276
Query: 234 DKNAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPVEGLRE 293
D + D GKECVVCLSEPRDT VLPCRHMC+C CA+ L++QTN CP+CRQPVE L E
Sbjct: 277 DGS----DEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLLE 332
Query: 294 I 294
I
Sbjct: 333 I 333
>AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379
Length = 378
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 52 HVERHRAVAVSVGVNVKGDTLRLVPXXXXXXGRSLLLAFSFDADGPGSITVCFFAQED-K 110
+VE A V VNV T+RLV L++F FDA GS T+ FF +E+ K
Sbjct: 128 YVEHQTAKKVKNDVNVNKATVRLV--ADDLNPGHYLVSFVFDALFDGSFTIIFFGEEESK 185
Query: 111 CALKTAKENLLQPVTVPFKEGRGQEFKQPSGSGIDVSRFEESELTNVGEGGVFPVAFKVQ 170
C + P+ VPF++G GQ+F Q G+GID+ F +L+ V+P+ +
Sbjct: 186 CTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPSPEEVYPLVISAE 245
Query: 171 MDVSGNQESEGAHETEQSKYLVKYAIFVKKDNAEYGVHVVQQILWVNGIRYVLQEIYGIG 230
+S + SE +Q + A+ K ++ + V V++QILW+ G RY LQE+YGI
Sbjct: 246 TVISPSSVSEEPLVHKQ----ITQAVLEKTNDGSFKVKVMKQILWIEGERYELQELYGID 301
Query: 231 NTADK----NAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQ 286
N+ + + ED GKECV+CL+EP+DTAV+PCRH+CLC +CA+ L++QTNKCPICRQ
Sbjct: 302 NSITQGTAASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQ 361
Query: 287 PVEGLREIEVDN 298
P+ L +I+V++
Sbjct: 362 PIHELVKIKVES 373
>AT3G06140.1 | chr3:1856993-1858777 REVERSE LENGTH=360
Length = 359
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 150/254 (59%), Gaps = 18/254 (7%)
Query: 52 HVERHRAVAVSVGVNVKGDTLRL-----VPXXXXXXGRSLLLAFSFDADGPGSITVCFFA 106
++E+ A V VNV DT+RL VP L++F FDA GS T+ FFA
Sbjct: 112 YLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHH-------LVSFVFDALFDGSFTITFFA 164
Query: 107 QED-KCALKTAKENLLQPVTVPFKEGRGQEFKQPSGSGIDVSRFEESELTNVGEGGVFPV 165
+E+ C + + P F++G GQ+F QPSG+G D+S F +L+ E V+P+
Sbjct: 165 KEEPNCTIIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPLEEDVYPL 224
Query: 166 AFKVQMDVSGNQESEGAHETEQSKYLVKYAIFVKKDNAEYGVHVVQQILWVNGIRYVLQE 225
+ +S N SE + +Q V A+ K ++ + V VV+QILW+ G+RY L+E
Sbjct: 225 VISAETIISPNSISEQSSVHKQ----VTQAVLEKDNDGSFKVKVVKQILWIEGVRYELRE 280
Query: 226 IYG-IGNTADKNAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPIC 284
+YG A E SG ECV+C++E +DTAVLPCRH+C+C +CA+ L+ Q+NKCPIC
Sbjct: 281 LYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPIC 340
Query: 285 RQPVEGLREIEVDN 298
RQP+E L EI++++
Sbjct: 341 RQPIEELLEIKMNS 354
>AT1G54150.1 | chr1:20215480-20217303 FORWARD LENGTH=384
Length = 383
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 235 KNAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTN-KCPICRQPVEG 290
++A E G+ CV+C+S R A +PC H+ CR CA ++ + N KCP+C Q + G
Sbjct: 320 EDADEIPDGELCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRG 376
>AT2G21380.1 | chr2:9141833-9148883 FORWARD LENGTH=1059
Length = 1058
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 246 CVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPV 288
C VC P T +LPCRH CLC+ C+ ++CPICR +
Sbjct: 1011 CKVCFESPTATILLPCRHFCLCKSCS----LACSECPICRTKI 1049
>AT2G38185.4 | chr2:16000155-16002699 FORWARD LENGTH=448
Length = 447
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 242 SGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPVEGLREI 294
S + C +C PRD LPC H C EC ++ CPICR+ ++ ++ I
Sbjct: 392 SRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRI 444
>AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400
Length = 399
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 236 NAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPVEGLREI 294
N E + C +C PRD LPC H C +C +K +CPICR+ + ++ I
Sbjct: 338 NDVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRI 396
>AT4G39050.1 | chr4:18193462-18200148 FORWARD LENGTH=1056
Length = 1055
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 237 AHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPV 288
A+ D + C VC P +LPCRH CLC+ C+ ++CPICR +
Sbjct: 999 ANGDANSHICKVCFESPTAAILLPCRHFCLCKSCS----LACSECPICRTKI 1046
>AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405
Length = 404
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 236 NAHEDDSGKECVVCLSEPRDTAVLPCRHMCLCRECAQVLKYQTNKCPICRQPVEGLREI 294
N E + C +C PRD LPC H C +C +K +CPICR+ + ++ I
Sbjct: 343 NDVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRI 401
>AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653
Length = 652
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 205 YGVHVVQQILWVNGIRYVLQEIYGIGNTADKNAH-EDDSGKECVVCLSEPRDTAVLPCRH 263
+ +H Q L ++ +R ++ + + K+ H E+ ++C VC +T + C H
Sbjct: 557 HNLHSTLQ-LEMSELRDSVKTCLDVNASLQKSVHLENPFKRKCCVCNETQVETLLYRCGH 615
Query: 264 MCLCRECAQVLKYQTNKCPICRQPVEGLREIEVDNK 299
MC C CA L+Y KCPIC + + + VD++
Sbjct: 616 MCTCLRCANELQYNGGKCPICHAKILDVVRVFVDSR 651
>AT4G24204.3 | chr4:12562069-12562815 REVERSE LENGTH=179
Length = 178
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 225 EIYGIGN--TADKNAHED-DSGKECVVCLSEPRDTAVLPCRHMCLCRECAQ-VLKYQTNK 280
E+ G G+ TA ++ +D D CV+C E R+ +PC H CR CAQ +L ++
Sbjct: 100 EVTGKGDVETASFSSSDDVDYSTLCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKV 159
Query: 281 CPICRQPV 288
CPICR+ +
Sbjct: 160 CPICRRVI 167
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,958,338
Number of extensions: 246205
Number of successful extensions: 751
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 746
Number of HSP's successfully gapped: 15
Length of query: 313
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 215
Effective length of database: 8,419,801
Effective search space: 1810257215
Effective search space used: 1810257215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)