BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0368700 Os01g0368700|AK067396
(215 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214 100 8e-22
AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215 99 2e-21
AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220 90 8e-19
AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185 89 2e-18
AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214 87 7e-18
AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192 82 2e-16
AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208 77 5e-15
AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244 71 5e-13
AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245 69 1e-12
>AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214
Length = 213
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 15 VDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTASCVLLS 74
+ +T + LLPTGTVLAF L+P F+N GG C S+ T+ L+A C SC +LS
Sbjct: 41 IGQTFQTTAHLANLLPTGTVLAFQLLSPIFSN-GGQCDLVSKIMTSTLVAICGFSCFILS 99
Query: 75 FTDSLVSHVDGRRLYYGVATLRGFRPFNFEGTR-EEMEERFGDLPGMKVRALDXXXXXXX 133
FTDS + YG+AT+ GF + T +E+ +R+ K+R +D
Sbjct: 100 FTDSYKDK--NGTICYGLATIHGFWIIDGSTTLPQELSKRY------KLRFIDFVHAFMS 151
Query: 134 XXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTTRKSIGY 190
L + + C FP E+ LP+G+G+ +SM+F FPTTR IG+
Sbjct: 152 LFVFGAVVLFDRNAVNCFFPSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGIGF 208
>AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215
Length = 214
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 10/177 (5%)
Query: 15 VDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTASCVLLS 74
+ KT ++ LLPTGTVLAF L+P TN G C SR+ TA L++ C SC +LS
Sbjct: 42 IGKTFQTTANLANLLPTGTVLAFQILSPICTN-VGRCDLTSRFMTALLVSICGFSCFILS 100
Query: 75 FTDSLVSHVDGRRLYYGVATLRGFRPFNFEGTR-EEMEERFGDLPGMKVRALDXXXXXXX 133
FTDS ++G + YG AT+ GF + T +E+ + + K+R +D
Sbjct: 101 FTDSY-KDLNGS-VCYGFATIHGFWIIDGSATLPQELSKSY------KLRFIDFVHAIMS 152
Query: 134 XXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTTRKSIGY 190
L + +V C +P+ E+ LP+ +G+ SMVF FPTTR IG+
Sbjct: 153 FLVFGAVVLFDQNVVNCFYPEPSAEVVELLTTLPVAVGVFCSMVFAKFPTTRHGIGF 209
>AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220
Length = 219
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 6/174 (3%)
Query: 17 KTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTASCVLLSFT 76
T+ +A ++ LLPTGT+LAF L P FT++G C A+R+ TA L+ ASC + SFT
Sbjct: 43 NTLTSAANLSNLLPTGTLLAFQLLTPVFTSNG-VCDHATRFLTAVLLFLLAASCFVSSFT 101
Query: 77 DSLVSHVDGRRLYYGVATLRGFRPFNFEGTREEMEERFGDLPGMKVRALDXXXXXXXXXX 136
DS+ D +Y+G T +G ++ + DL ++R +D
Sbjct: 102 DSV--KADDGTIYFGFVTFKGMWVVDYP---DPSGLGLPDLAKYRMRFVDWIHATLSVLV 156
Query: 137 XXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTTRKSIGY 190
L + + C +P + +P+G+G++ S++FM+FP R IGY
Sbjct: 157 FGAVALRDKYITDCFYPSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGY 210
>AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185
Length = 184
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 10 TPPAVVDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTAS 69
T A+ D+T D++KLLPTGTV F L P TN+ G C ++Y T LI C S
Sbjct: 4 TFKAIRDRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNN-GHCLLINKYLTGVLIVICAFS 62
Query: 70 CVLLSFTDSLVSHVDGRRLYYGVATLRGFRPFNFEGTREEMEERFGDLPGMKVRALDXXX 129
C FTDS + DG ++YGVAT++G P + DL ++R D
Sbjct: 63 CCFTCFTDSYRTR-DG-YVHYGVATVKGLWP----------DSSSVDLSSKRLRVGDFVH 110
Query: 130 XXXXXXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTTRKSIG 189
L +A+ C +P G+ LP +G+++ VF +FP+ R IG
Sbjct: 111 AFFSLIVFSVISLLDANTVNCFYPGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIG 170
Query: 190 YTDMMPHKED 199
+ H ED
Sbjct: 171 --NPSDHSED 178
>AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214
Length = 213
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
Query: 7 RPPTPPAVVDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAAC 66
R + AV+ +T+ +A ++ LLPTGT+LAF L P FT++ G+C ++ T L+
Sbjct: 27 RQTSQHAVMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSN-GSCDYPTQVLTIVLLTLL 85
Query: 67 TASCVLLSFTDSLVSHVDGRRLYYGVATLRGFRPFNFEGTREEMEERFG--DLPGMKVRA 124
+ SC L SFTDS+ + DG +YYG AT +G F++ + G +L ++R
Sbjct: 86 SISCFLSSFTDSVKAE-DG-NVYYGFATRKGMWVFDYPD-----PDGLGLPNLSKYRIRI 138
Query: 125 LDXXXXXXXXXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTT 184
+D L + + C +P ++ +PMG+G++ M+F++FP
Sbjct: 139 IDWIHAVLSVLVFGAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPAR 198
Query: 185 RKSIGY 190
R IGY
Sbjct: 199 RHGIGY 204
>AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192
Length = 191
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 25/193 (12%)
Query: 17 KTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGA--ASRYTTAALIAACTASCVLLS 74
+++ +A + LLPTGT L F L PSF+N GG C ++ T LI+ C A+C S
Sbjct: 7 RSLPSAGNFANLLPTGTALIFETLLPSFSN-GGECNNKPVNKLLTITLISFCAAACFFSS 65
Query: 75 FTDSLVSHVDGRRLYYGVATLRGFRPFN---------FEGTREEMEERFGDLPGMKVRAL 125
FTDS V DG R+YYG+AT G N G + ER+ K+ +
Sbjct: 66 FTDSYVGQ-DG-RIYYGIATSNGLHILNDYPDEGYDPESGLTADKRERY------KLSFV 117
Query: 126 DXXXXXXXXXXXXXXXLGNADVQGCLFPD-----AGTGFTEMFRNLPMGLGLLASMVFMI 180
D + ++D + CL P+ G F M + + + +AS F I
Sbjct: 118 DFVHAFVSVIVFLALAVESSDFRRCLLPEDDENSWGGHFVLMIKYFAVMVLTMASFFFAI 177
Query: 181 FPTTRKSIGYTDM 193
FP+ R+ IG +D+
Sbjct: 178 FPSKRRGIGISDI 190
>AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208
Length = 207
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 13 AVVDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTASCVL 72
A +K++ ++KLLPTGT+ + L P TN G C ++ ++ L+A C+ SCV
Sbjct: 21 ANTNKSLTGLESLIKLLPTGTLFIYLLLNPVLTNDG-ECSTGNKVMSSILVALCSFSCVF 79
Query: 73 LSFTDSLVSHVDGRRLYYGVATLRGFRPFNFEGTREEMEERFGDLPGMKVRALDXXXXXX 132
FTDS VDG R +G+ T +G + G+ DL K+R D
Sbjct: 80 SCFTDSF-KGVDGSR-KFGIVTKKGLWTYAEPGSV--------DLSKYKLRIADFVHAGF 129
Query: 133 XXXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTTRKSIGYTD 192
L +A+ C +P + LP +G+ ++ +F +FP+ R IGY
Sbjct: 130 VLAVFGTLVLLDANTASCFYPRFRETQKTLVMALPPAVGVASATIFALFPSKRSGIGYA- 188
Query: 193 MMPHKEDYG 201
P E+ G
Sbjct: 189 --PIAEEVG 195
>AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244
Length = 243
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 15 VDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTASCVLLS 74
V KT+ ++ LPTGT+L F + P+ G C + L+ C SC
Sbjct: 61 VQKTVSKTSMLVNFLPTGTLLMFEMVLPTIYRDGD-CNGINTLMIHLLLLLCAMSCFFFH 119
Query: 75 FTDSLVSHVDGRRLYYGVATLRGFRPF------NFEG----TREEM---EERFGDLPGMK 121
FTDS + DG+ +YYG T RG F F G +E+ +ER+ K
Sbjct: 120 FTDSFKAS-DGK-IYYGFVTPRGLAVFMKPPSPGFGGGDVIAEKEIPVTDERY------K 171
Query: 122 VRALDXXXXXXXXXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIF 181
+R D + V GCLFP ++ + P+ +G++ S +F++F
Sbjct: 172 LRVNDFVHSVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPLMVGIVCSALFLVF 231
Query: 182 PTTRKSIG 189
PT+R +G
Sbjct: 232 PTSRYGVG 239
>AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245
Length = 244
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 12/183 (6%)
Query: 15 VDKTMCAACDILKLLPTGTVLAFHELAPSFTNHGGACGAASRYTTAALIAACTASCVLLS 74
V KT+ ++ LPTGT+L F + PS G C + L+ C SC
Sbjct: 62 VQKTVSKTSMLVNFLPTGTLLMFEMVLPSIYRDGD-CNGINTLMIHLLLLLCAMSCFFFH 120
Query: 75 FTDSLVSHVDGRRLYYGVATLRGFRPF------NFEG--TREEMEERFGDLPGMKVRALD 126
FTDS + DG+ +YYG T RG F F G E E D K+ D
Sbjct: 121 FTDSFKAS-DGK-IYYGFVTPRGLAVFMKPPPPEFGGGDVIAEAEIPVTD-DRYKLTVND 177
Query: 127 XXXXXXXXXXXXXXXLGNADVQGCLFPDAGTGFTEMFRNLPMGLGLLASMVFMIFPTTRK 186
+ V GCLFP ++ + P+ +G++ S +F++FPTTR
Sbjct: 178 FVHAVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPIMVGIVCSALFLVFPTTRY 237
Query: 187 SIG 189
+G
Sbjct: 238 GVG 240
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,765,155
Number of extensions: 178686
Number of successful extensions: 409
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 9
Length of query: 215
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 121
Effective length of database: 8,529,465
Effective search space: 1032065265
Effective search space used: 1032065265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)