BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0359800 Os01g0359800|Os01g0359800
         (1285 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14470.1  | chr3:4857940-4861104 FORWARD LENGTH=1055           320   2e-87
AT3G14460.1  | chr3:4851990-4856264 REVERSE LENGTH=1425           310   2e-84
AT3G46530.1  | chr3:17130739-17133246 REVERSE LENGTH=836          211   3e-54
AT3G50950.2  | chr3:18936127-18938685 FORWARD LENGTH=853          195   1e-49
AT1G53350.1  | chr1:19903899-19907515 FORWARD LENGTH=928          192   7e-49
AT5G48620.1  | chr5:19717406-19720932 FORWARD LENGTH=909          188   2e-47
AT1G58390.1  | chr1:21690962-21693891 REVERSE LENGTH=908          188   2e-47
AT1G59780.1  | chr1:21993581-21997691 REVERSE LENGTH=907          186   1e-46
AT5G35450.1  | chr5:13667809-13670685 FORWARD LENGTH=902          185   1e-46
AT5G43470.1  | chr5:17463130-17466658 REVERSE LENGTH=909          182   1e-45
AT1G50180.1  | chr1:18584235-18587136 FORWARD LENGTH=858          175   1e-43
AT3G46710.1  | chr3:17206489-17209032 REVERSE LENGTH=848          174   3e-43
AT1G59218.1  | chr1:21828398-21831713 FORWARD LENGTH=1050         169   1e-41
AT1G58848.1  | chr1:21792140-21795455 FORWARD LENGTH=1050         169   1e-41
AT1G58807.1  | chr1:21780574-21783793 FORWARD LENGTH=1018         167   3e-41
AT1G59124.1  | chr1:21816832-21819653 FORWARD LENGTH=856          167   5e-41
AT3G46730.1  | chr3:17213069-17215612 REVERSE LENGTH=848          166   1e-40
AT1G58410.1  | chr1:21701286-21704255 REVERSE LENGTH=900          163   6e-40
AT1G58400.1  | chr1:21696165-21699118 REVERSE LENGTH=901          163   6e-40
AT3G07040.1  | chr3:2226244-2229024 REVERSE LENGTH=927            162   2e-39
AT1G58602.1  | chr1:21760167-21763765 FORWARD LENGTH=1139         161   2e-39
AT1G10920.1  | chr1:3644587-3647004 REVERSE LENGTH=728            154   4e-37
AT1G59620.1  | chr1:21902627-21905527 FORWARD LENGTH=843          137   6e-32
AT5G63020.1  | chr5:25283252-25286002 REVERSE LENGTH=889          134   2e-31
AT4G27220.1  | chr4:13633953-13636712 REVERSE LENGTH=920          133   6e-31
AT1G12290.1  | chr1:4178593-4181247 REVERSE LENGTH=885            131   2e-30
AT5G43730.1  | chr5:17560267-17562813 FORWARD LENGTH=849          128   2e-29
AT1G12210.1  | chr1:4140948-4143605 FORWARD LENGTH=886            128   3e-29
AT4G10780.1  | chr4:6634779-6637457 REVERSE LENGTH=893            126   8e-29
AT5G43740.1  | chr5:17566010-17568598 FORWARD LENGTH=863          124   3e-28
AT1G61180.2  | chr1:22551486-22554185 FORWARD LENGTH=900          123   6e-28
AT1G12220.1  | chr1:4145011-4147680 FORWARD LENGTH=890            122   9e-28
AT5G47250.1  | chr5:19186045-19188576 REVERSE LENGTH=844          122   1e-27
AT1G61190.1  | chr1:22557602-22560687 FORWARD LENGTH=968          122   1e-27
AT1G15890.1  | chr1:5461406-5463961 FORWARD LENGTH=852            122   2e-27
AT4G26090.1  | chr4:13224596-13227325 FORWARD LENGTH=910          122   2e-27
AT4G27190.1  | chr4:13620977-13623934 REVERSE LENGTH=986          121   2e-27
AT1G61310.1  | chr1:22613166-22615943 REVERSE LENGTH=926          120   6e-27
AT1G51480.1  | chr1:19090847-19094306 REVERSE LENGTH=942          119   8e-27
AT1G61300.1  | chr1:22607714-22610175 REVERSE LENGTH=763          119   8e-27
AT1G12280.1  | chr1:4174875-4177559 REVERSE LENGTH=895            118   2e-26
AT1G63350.1  | chr1:23494935-23497631 REVERSE LENGTH=899          116   1e-25
AT5G05400.1  | chr5:1597745-1600369 REVERSE LENGTH=875            112   1e-24
AT1G63360.1  | chr1:23499515-23502169 REVERSE LENGTH=885          100   7e-21
AT5G47260.1  | chr5:19189411-19192516 FORWARD LENGTH=949           94   4e-19
AT1G62630.1  | chr1:23185912-23188593 FORWARD LENGTH=894           94   5e-19
AT1G17600.1  | chr1:6053026-6056572 REVERSE LENGTH=1050            77   7e-14
AT3G44670.1  | chr3:16217242-16221425 FORWARD LENGTH=1220          76   1e-13
AT5G40910.1  | chr5:16395507-16399129 FORWARD LENGTH=1105          75   3e-13
AT4G33300.1  | chr4:16051162-16054005 REVERSE LENGTH=817           71   3e-12
AT5G17680.1  | chr5:5822999-5827153 FORWARD LENGTH=1295            69   1e-11
AT1G27170.1  | chr1:9434718-9439219 FORWARD LENGTH=1385            66   1e-10
AT5G45250.1  | chr5:18321914-18326022 REVERSE LENGTH=1218          65   2e-10
AT1G33560.1  | chr1:12169092-12171878 FORWARD LENGTH=788           64   4e-10
AT3G44480.1  | chr3:16090878-16096041 REVERSE LENGTH=1195          64   8e-10
AT5G46260.1  | chr5:18759102-18763358 REVERSE LENGTH=1206          63   1e-09
AT2G16870.1  | chr2:7308077-7311686 REVERSE LENGTH=1110            62   2e-09
AT1G27180.1  | chr1:9439859-9445818 FORWARD LENGTH=1557            62   2e-09
AT1G63870.1  | chr1:23707131-23711901 REVERSE LENGTH=1032          61   3e-09
AT5G41550.1  | chr5:16617232-16620785 REVERSE LENGTH=1086          60   1e-08
AT5G51630.1  | chr5:20970069-20974666 FORWARD LENGTH=1230          59   1e-08
AT5G04720.1  | chr5:1360748-1363665 FORWARD LENGTH=812             59   1e-08
AT3G15700.1  | chr3:5321136-5322376 REVERSE LENGTH=376             59   2e-08
AT5G47280.1  | chr5:19193157-19195559 FORWARD LENGTH=624           59   2e-08
AT1G69550.1  | chr1:26148836-26153374 REVERSE LENGTH=1401          59   3e-08
AT1G52660.1  | chr1:19613475-19614796 FORWARD LENGTH=380           58   3e-08
AT3G25510.1  | chr3:9260838-9268797 REVERSE LENGTH=1982            58   3e-08
AT5G45230.1  | chr5:18302147-18308303 REVERSE LENGTH=1232          58   4e-08
AT5G44510.1  | chr5:17929673-17934188 REVERSE LENGTH=1188          57   7e-08
AT5G45200.1  | chr5:18283967-18290332 REVERSE LENGTH=1262          57   1e-07
AT3G04220.1  | chr3:1109118-1112188 REVERSE LENGTH=868             56   1e-07
AT5G41750.1  | chr5:16694047-16697527 FORWARD LENGTH=1069          56   2e-07
AT3G44630.3  | chr3:16196292-16200410 FORWARD LENGTH=1241          55   2e-07
AT5G66910.1  | chr5:26718338-26721133 REVERSE LENGTH=816           55   2e-07
AT4G12010.1  | chr4:7197325-7201393 REVERSE LENGTH=1220            55   2e-07
AT5G45440.1  | chr5:18412426-18413466 REVERSE LENGTH=347           54   7e-07
AT2G14080.1  | chr2:5925225-5929600 FORWARD LENGTH=1216            53   1e-06
AT5G48780.1  | chr5:19777511-19779604 FORWARD LENGTH=670           53   1e-06
AT4G19520.1  | chr4:10639488-10647070 REVERSE LENGTH=1745          53   1e-06
AT4G16950.1  | chr4:9539010-9544340 REVERSE LENGTH=1450            52   2e-06
AT4G16920.1  | chr4:9519173-9525691 REVERSE LENGTH=1305            52   2e-06
AT5G66900.1  | chr5:26714931-26717757 REVERSE LENGTH=810           52   2e-06
AT5G36930.2  | chr5:14567771-14571916 REVERSE LENGTH=1192          52   2e-06
AT5G48770.1  | chr5:19773277-19777242 REVERSE LENGTH=1191          52   2e-06
AT4G16960.1  | chr4:9546343-9551007 REVERSE LENGTH=1042            52   3e-06
AT5G11250.1  | chr5:3587978-3591960 REVERSE LENGTH=1190            51   4e-06
AT5G38850.1  | chr5:15555187-15558430 FORWARD LENGTH=987           51   4e-06
AT5G41540.1  | chr5:16612659-16616063 REVERSE LENGTH=1039          51   4e-06
AT5G45260.1  | chr5:18326277-18332229 FORWARD LENGTH=1289          50   8e-06
AT5G44870.1  | chr5:18114666-18118608 FORWARD LENGTH=1171          50   9e-06
AT5G18350.1  | chr5:6074069-6078569 REVERSE LENGTH=1246            50   1e-05
>AT3G14470.1 | chr3:4857940-4861104 FORWARD LENGTH=1055
          Length = 1054

 Score =  320 bits (821), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 267/914 (29%), Positives = 423/914 (46%), Gaps = 91/914 (9%)

Query: 15  SMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEALK 74
           ++V E   S+    +K  E  E   E L   L  I  V+ DAEE+      V+ W+  L+
Sbjct: 19  TLVSEPFRSF----FKRRELNENLLERLSTALLTITAVLIDAEEKQITNPVVEKWVNELR 74

Query: 75  KVAYEANDIFDEFKYEALR----REAKKNGHYRGL-GMDAVKLFPTHNRIMFRYTMGKKL 129
            V Y A D  D+   EALR     E+  +   R L G  ++  F   N       +  +L
Sbjct: 75  DVVYHAEDALDDIATEALRLNIGAESSSSNRLRQLRGRMSLGDFLDGNS----EHLETRL 130

Query: 130 RRIVQIIEVLVAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVRS 189
            ++   +E L ++ N  G K +  ++  KQ   T S++D SE       R+ +K +I+R 
Sbjct: 131 EKVTIRLERLASQRNILGLK-ELTAMIPKQRLPTTSLVDESEV----FGRDDDKDEIMRF 185

Query: 190 LL----ENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIAS 245
           L+    ++N I V+ IVG+GG+GKTT ++L+YN+  ++ +F    W  VS+EFD+ KI  
Sbjct: 186 LIPENGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITK 245

Query: 246 KISMTTNEKDCD----NVLQ-KLQQEVSGKR--FLLVLDDVWNRDVDKWSKLKTCLQQGA 298
           K+  +   + C+    +VLQ KL++ ++G    FLLVLDD+WN +   W  L+      A
Sbjct: 246 KVYESVTSRPCEFTDLDVLQVKLKERLTGTGLPFLLVLDDLWNENFADWDLLRQPFIHAA 305

Query: 299 AGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKP---SELVDMV 355
            GS IL TTR   VA IM  V  HNL  L +   W +  +  F    ++P    E+ D+ 
Sbjct: 306 QGSQILVTTRSQRVASIMCAVHVHNLQPLSDGDCWSLFMKTVF--GNQEPCLNREIGDLA 363

Query: 356 DKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFD---DDSGILPILKLSYDDL 412
           ++ V +C G PLA + +G VL  +    EW  +LS S I+D   D S +LP+L++SY  L
Sbjct: 364 ERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLS-SRIWDLPADKSNLLPVLRVSYYYL 422

Query: 413 PSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSF 471
           P+ +K CFA+C+IFPK +  + + +V LWMA  F+  + +   LE++GN  F+EL  RS 
Sbjct: 423 PAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSL 482

Query: 472 FQDVDE--------TSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRP-- 521
            Q              L +    +   +F   CK+        L  +R+     M     
Sbjct: 483 LQKTKTRYIMHDFINELAQFASGEFSSKFEDGCKLQVSERTRYLSYLRDNYAEPMEFEAL 542

Query: 522 NSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRAL 581
             ++ L+       ++  R +  LD  + +++LP  T                   LR L
Sbjct: 543 REVKFLRTFLPLSLTNSSR-SCCLDQMVSEKLLPTLT------------------RLRVL 583

Query: 582 CIPNFR-GRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXP 640
            + +++  R      K++ H R+L+LS +  +E+LP+ +  +YNLQT            P
Sbjct: 584 SLSHYKIARLPPDFFKNISHARFLDLSRT-ELEKLPKSLCYMYNLQTLLLSYCSSLKELP 642

Query: 641 KNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNS--SDCSNVGEIHDXXX 698
            ++  + +LR+L   G T L  MP    ++ +LQTLT F V  S  S  S +G +HD   
Sbjct: 643 TDISNLINLRYLDLIG-TKLRQMPRRFGRLKSLQTLTTFFVSASDGSRISELGGLHDLHG 701

Query: 699 XXXXXXXXXXXXXXXXXXXXXXXXXVDLTHLCFKW-----SNDIEKDPEHYQN---VLGA 750
                                      L  + F W     S++   +P   QN   V   
Sbjct: 702 KLKIVELQRVVDVADAAEANLNSKK-HLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEK 760

Query: 751 LRPHAKLQLLKVQSFKGTNFPTWMTDVCTFMNLTEIHLVDCPLCKEIPKFWKLPALEVLH 810
           LRPH  ++ L ++ +KG  FP W++D  +F  +  I L +C  C  +P   +LP L+ LH
Sbjct: 761 LRPHRHIEKLAIERYKGRRFPDWLSDP-SFSRIVCIRLRECQYCTSLPSLGQLPCLKELH 819

Query: 811 LTGLNKLQSL------CSGASDVIMCSAFQXXXXXXXXXXXXXXRWGTMEGKLGDEAIFP 864
           ++G+  LQS+                  F+               W  +    GD  +FP
Sbjct: 820 ISGMVGLQSIGRKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRGD--LFP 877

Query: 865 VLEDIHIKNCPELT 878
            L+ + I  CPELT
Sbjct: 878 SLKKLFILRCPELT 891
>AT3G14460.1 | chr3:4851990-4856264 REVERSE LENGTH=1425
          Length = 1424

 Score =  310 bits (795), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 260/911 (28%), Positives = 413/911 (45%), Gaps = 99/911 (10%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
           LV + K K+SS LL++ KV              L     V++DA+++A H + VK WL  
Sbjct: 23  LVELCKGKSSSALLKRLKV-------------ALVTANPVLADADQRAEHVREVKHWLTG 69

Query: 73  LKKVAYEANDIFDEFKYEALRREA-KKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRR 131
           +K   ++A DI DE + EALRR    + G   GL  + +       R   +  +  K+ +
Sbjct: 70  IKDAFFQAEDILDELQTEALRRRVVAEAGGLGGLFQNLMA-----GREAIQKKIEPKMEK 124

Query: 132 IVQIIEVLVAEMNAFGFKYQRQSLASKQWRQTDSII--DYSEKDIVERSRETEKQKIVRS 189
           +V+++E  V  +   G K   ++    QWRQ       D  +  +V   R  +K  +V  
Sbjct: 125 VVRLLEHHVKHIEVIGLKEYSET-REPQWRQASRSRPDDLPQGRLV--GRVEDKLALVNL 181

Query: 190 LLENNDI-----MVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIA 244
           LL +++I      V+ +VGM G+GKTT  ++++N+ ++ EHF++  W+     F++  + 
Sbjct: 182 LLSDDEISIGKPAVISVVGMPGVGKTTLTEIVFNDYRVTEHFEVKMWISAGINFNVFTVT 241

Query: 245 SKI-----SMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAA 299
             +     S   N +D  ++  +L++ +SGKRFLLVLDD W+    +W   +        
Sbjct: 242 KAVLQDITSSAVNTEDLPSLQIQLKKTLSGKRFLLVLDDFWSESDSEWESFQVAFTDAEE 301

Query: 300 GSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAF--YLKKEKPSELVDMVDK 357
           GS I+ TTR   V+ +    + + +  + N   WE+I R AF          EL  +  +
Sbjct: 302 GSKIVLTTRSEIVSTVAKAEKIYQMKLMTNEECWELISRFAFGNISVGSINQELEGIGKR 361

Query: 358 FVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMK 417
             ++C G PLAARA+ S L +K  P +W  +      + +   ILP+LKLSYD LP Q+K
Sbjct: 362 IAEQCKGLPLAARAIASHLRSKPNPDDWYAVSKNFSSYTN--SILPVLKLSYDSLPPQLK 419

Query: 418 LCFAFCAIFPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSFFQDVD 476
            CFA C+IFPK +  D E LV LWMA D +    +   LE +GN    +L  +SFFQ +D
Sbjct: 420 RCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRLD 479

Query: 477 ETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDSSRHLFS 536
            T                +  +HDLM+D+A  V  + C  +    ++I  +  ++RH   
Sbjct: 480 IT--------------MTSFVMHDLMNDLAKAVSGDFCFRL--EDDNIPEIPSTTRHF-- 521

Query: 537 SYHRMNTLLDAFIEKRILP----LRTVMFFGHLDGFPQHLL----------KYNSLRALC 582
           S+ R     DA +  R +     LRT++ F          L            + LR L 
Sbjct: 522 SFSRSQC--DASVAFRSICGAEFLRTILPFNSPTSLESLQLTEKVLNPLLNALSGLRILS 579

Query: 583 IPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKN 642
           + +++        K L  LRYL+LS S  ++ LPE +  L NLQT            PK+
Sbjct: 580 LSHYQITNLPKSLKGLKLLRYLDLS-STKIKELPEFVCTLCNLQTLLLSNCRDLTSLPKS 638

Query: 643 MKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNSSDCSNVGEIHDXXXXXXX 702
           +  + +LR L   G T L  MPP ++K+ +LQ L+ FV+G  S  + + E+ +       
Sbjct: 639 IAELINLRLLDLVG-TPLVEMPPGIKKLRSLQKLSNFVIGRLSG-AGLHELKELSHLRGT 696

Query: 703 XXXXXXXXXXXXXXXXXXXXXVD--LTHLCFKWS-----------NDIEKDPEHYQNVLG 749
                                    L  L  KW+           N +  D    + VL 
Sbjct: 697 LRISELQNVAFASEAKDAGLKRKPFLDGLILKWTVKGSGFVPGSFNALACD---QKEVLR 753

Query: 750 ALRPHAKLQLLKVQSFKGTNFPTWMTDVCTFMNLTEIHLVDCPLCKEIPKFWKLPALEVL 809
            L PH  L+   ++S++G  FP W+ D  +F  +T + L  C LC  +P   +LP+L+ L
Sbjct: 754 MLEPHPHLKTFCIESYQGGAFPKWLGD-SSFFGITSVTLSSCNLCISLPPVGQLPSLKYL 812

Query: 810 HLTGLNKLQSLCSG---ASDVIMCSAFQXXXXXXXXXXXXXXRWGTMEGKLGDEAIFPVL 866
            +   N LQ +        +      FQ               W   E    ++ IFP L
Sbjct: 813 SIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEWICPE---LEDGIFPCL 869

Query: 867 EDIHIKNCPEL 877
           + + I+ CP L
Sbjct: 870 QKLIIQRCPSL 880

 Score = 63.5 bits (153), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 57/271 (21%)

Query: 977  LQKLEIKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQGIGQLLPRLKF 1036
            LQ L I SCD L   P+   +S  +L+EL + +C +L+   P    P          LK 
Sbjct: 1093 LQSLHIDSCDGLTSLPENLTESYPNLHELLIIACHSLES-FPGSHPPTT--------LKT 1143

Query: 1037 LGIRNCQELTEIFNLPWSLKTIDIYRCPRLKSIYGKQEDSESGSAHAEQLTTLLSKRMPD 1096
            L IR+C++L    N   SL+    Y   +L+ ++        GS+ +  +   LS     
Sbjct: 1144 LYIRDCKKL----NFTESLQPTRSYS--QLEYLF-------IGSSCSNLVNFPLS----- 1185

Query: 1097 PXXXXXXXXTEHLLPCLEHLNIGHCDSF------TKVPDLPPSLQILHMYNCPNVR-FLS 1149
                        L P L  L+I  C+SF        + D   +L+ L + +CPN+  F  
Sbjct: 1186 ------------LFPKLRSLSIRDCESFKTFSIHAGLGDDRIALESLEIRDCPNLETFPQ 1233

Query: 1150 GKLDA--LDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLE 1207
            G L    L S+ +S+CK L++L   L  L SL SL I +C  + ++P G G  S+L TL 
Sbjct: 1234 GGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGG-GFPSNLRTLC 1292

Query: 1208 IKYCPAMKSLPGRLQQRLDSLEEKDLSNMRS 1238
            I  C     L  R++  L     +DL N+R+
Sbjct: 1293 ISLC---DKLTPRIEWGL-----RDLENLRN 1315
>AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836
          Length = 835

 Score =  211 bits (536), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 196/689 (28%), Positives = 322/689 (46%), Gaps = 88/689 (12%)

Query: 1   MADLVTSMVIGPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQA 60
           M D +T  V+G        K  +YL+E+  +   ++E  E LK +L  I   + D E + 
Sbjct: 1   MVDAITEFVVG--------KIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEARE 52

Query: 61  SHRQGVKAWLEALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIM 120
              +  K W + +   AY+  D+ D +  +   R  +     RGL     +L     R M
Sbjct: 53  REDEVSKEWSKLVLDFAYDVEDVLDTYHLKLEERSQR-----RGLR----RLTNKIGRKM 103

Query: 121 FRYTMGKKLRRIVQIIEVLVAEMNAFGFKYQRQ--------SLASKQWRQTDSIIDYSEK 172
             Y++   +R + + I  +  +   +G    ++        SL  +Q R+  S+    ++
Sbjct: 104 DAYSIVDDIRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSV----DQ 159

Query: 173 DIVERSRETEKQKIVRSLL--ENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNR 230
           + V    E + + ++  LL  E  +  ++ I GMGGLGKT  A+ +YN   +KE F+   
Sbjct: 160 EEVVVGLEDDAKILLEKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRA 219

Query: 231 WVCVSDEFD----LSKIASKISMTTNEKDCDNVLQKLQQEVS--------GKRFLLVLDD 278
           W  VS E+     L +I   + MT+ E + + + +  ++E+         GK++L+V+DD
Sbjct: 220 WTYVSQEYKTGDILMRIIRSLGMTSGE-ELEKIRKFAEEELEVYLYGLLEGKKYLVVVDD 278

Query: 279 VWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQ-IMGTVQAHNLTTLDNRFLWEIIE 337
           +W R+   W  LK  L     GS ++ TTR+  VA+ + G   AH L  L     WE+ E
Sbjct: 279 IWEREA--WDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFE 336

Query: 338 RRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSK--SVIF 395
           +RAF   + K  +L+    + V +C G PL    +  +LS KT P EWN + +     + 
Sbjct: 337 QRAFRNIQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKT-PSEWNDVCNSLWRRLK 395

Query: 396 DDDSGILPIL-KLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVG 454
           DD   + PI+  LS+ +L  + KLCF + +IFP+DYEID+E L+ L +A  FI  +  + 
Sbjct: 396 DDSIHVAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMM 455

Query: 455 LEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMRE-E 513
           +E V      EL  RS  + V         RR++      +C+IHDL+ D+A+   +E  
Sbjct: 456 MEDVARYYIEELIDRSLLEAV---------RRERGKVM--SCRIHDLLRDVAIKKSKELN 504

Query: 514 CVTV----MGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRI-LPLRTVMFFGHLDGF 568
            V V    + + +S    ++   H F  Y           EKR    +R+ ++FG  D  
Sbjct: 505 FVNVYNDHVAQHSSTTCRREVVHHQFKRYSS---------EKRKNKRMRSFLYFGEFD-- 553

Query: 569 PQHL--LKYNSLRALCIPNFRG--RPCLIQAKHLHHLRYLNL-SHSWNMERLPEEISILY 623
             HL  L + +L+ L + +F     P  I    L HLRYL +  +S N   +   IS L 
Sbjct: 554 --HLVGLDFETLKLLRVLDFGSLWLPFKING-DLIHLRYLGIDGNSINDFDIAAIISKLR 610

Query: 624 NLQTXXXXXXXXXXXXPKNMKYMTSLRHL 652
            LQT              +++ +TSLRH+
Sbjct: 611 FLQTLFVSDNYFIEETI-DLRKLTSLRHV 638
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
          Length = 852

 Score =  195 bits (496), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 212/853 (24%), Positives = 371/853 (43%), Gaps = 94/853 (11%)

Query: 9   VIGPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKA 68
           ++  +V++  EK  + L E+ + +    +Q E L+ +L  +   + DAE Q    + ++ 
Sbjct: 1   MVDAVVTVFLEKTLNILEEKGRTVSDYRKQLEDLQSELKYMQSFLKDAERQKRTNETLRT 60

Query: 69  WLEALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKK 128
            +  L+++ YEA DI  + +      +       R       +L P   R+  +Y   K+
Sbjct: 61  LVADLRELVYEAEDILVDCQLA----DGDDGNEQRSSNAWLSRLHPA--RVPLQYKKSKR 114

Query: 129 LRRIVQIIEVLVAEMNAFGFKYQRQSLASKQW---RQTDSIIDYSEKDIVERSRETEKQK 185
           L+ I + I  + +++  + F++   S   +     R +  + D+++  +V    E +K+K
Sbjct: 115 LQEINERITKIKSQVEPY-FEFITPSNVGRDNGTDRWSSPVYDHTQ--VV--GLEGDKRK 169

Query: 186 IVRSLLENND--IMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKI 243
           I   L  +ND  ++++  VGMGGLGKTT A+ ++N+ +I+  F+   WV VS  F   +I
Sbjct: 170 IKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQI 229

Query: 244 ASKISMTTNEK----DCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAA 299
              I     +     D   +L+K+QQ + GKR+L+V+DDVW++++  W K+   L +G  
Sbjct: 230 MRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQG 289

Query: 300 GSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFL-----WEIIERRAFYLKK---EKPSEL 351
           GSVI+ TTR   VA+    VQA +  T     L     W +    AF       E+P EL
Sbjct: 290 GSVIV-TTRSESVAK---RVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERP-EL 344

Query: 352 VDMVDKFVDRCVGSPLAARAVGSVLSNKT-TPKEWNTLLSKSVIFDDD--------SGIL 402
            D+  + V +C G PL  +AVG +L  K     EW  +      F D+          ++
Sbjct: 345 EDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEH---FQDELRGNTSETDNVM 401

Query: 403 PILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRI 462
             L+LSYD+LPS +K C    +++P+D  I  + LV  W+   F+   NG    + G   
Sbjct: 402 SSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDC 461

Query: 463 FNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPN 522
           F+ L  R   + VD+T    +           TCKIHD++ D+ + + +++  +    P 
Sbjct: 462 FSGLTNRCLIEVVDKTYSGTII----------TCKIHDMVRDLVIDIAKKDSFS---NPE 508

Query: 523 SIQLLKDSSRHLFSSYHRMNTLLDAFIEKRIL---PLRTVMF---FGHLDGFPQHLLKYN 576
            +     + RHL  S +        F EK+I     LR V+     G ++     L K  
Sbjct: 509 GL-----NCRHLGISGN--------FDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKF 555

Query: 577 S----LRALCIPN--FRG--RPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTX 628
           +    LR L I    F       L +   L HL  L+LS++  + + P  +  L+NLQ  
Sbjct: 556 TDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQIL 615

Query: 629 XXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNSSDCS 688
                         +     L  L    C  LEC P  +  +  L+ L  F    S++  
Sbjct: 616 DASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGC 675

Query: 689 NVGEIHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLTHLCFKWSNDIEKDPEHYQNVL 748
            + E+ +                            ++L+ L     N  +   +     +
Sbjct: 676 KLSEVKN---LTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKI 732

Query: 749 GALRPHAKLQLLKVQSFKGTNFPTWMT----DVCTFMNLTEIHLVDC--PLCKEIPKFWK 802
            AL P  +L  L +Q + G + P+W++     +  +M++   +LV    P        W+
Sbjct: 733 DALTPPHQLHELSLQFYPGKSSPSWLSPHKLPMLRYMSICSGNLVKMQEPFWGNENTHWR 792

Query: 803 LPALEVLHLTGLN 815
           +  L +  L+ L+
Sbjct: 793 IEGLMLSSLSDLD 805
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
          Length = 927

 Score =  192 bits (489), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 174/630 (27%), Positives = 289/630 (45%), Gaps = 64/630 (10%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
           +VS   EK    L  +   + G++EQ + LKR+L  +  ++ DA+ + +  + V+ +LE 
Sbjct: 5   VVSFGVEKLWELLSRESARLNGIDEQVDGLKRQLGRLQSLLKDADAKKNETERVRNFLED 64

Query: 73  LKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRI 132
           +K + Y+A+DI + F    LR   K+ G  + +   A  L         R      +  I
Sbjct: 65  VKDIVYDADDIIESFLLNELR--GKEKGIKKQVRTLACFLVD-------RRKFASDIEGI 115

Query: 133 VQIIEVLVAEMNAFGFKY------QRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKI 186
            + I  ++  M + G ++      +  SL  +Q     +    SE D+V   +  E+  +
Sbjct: 116 TKRISEVIVGMQSLGIQHIADGGGRSLSLQERQREIRQTFSRNSESDLVGLDQSVEE--L 173

Query: 187 VRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASK 246
           V  L+EN+ + V+ + GMGG+GKTT A+ +++   ++ HF    WVCVS +F    +  +
Sbjct: 174 VDHLVENDSVQVVSVSGMGGIGKTTLARQVFHHDIVRRHFDGFSWVCVSQQFTRKDVWQR 233

Query: 247 ISMTTNEKDCDNVLQKLQQEVSGK--------RFLLVLDDVWNRDVDKWSKLKTCLQQGA 298
           I       D + ++Q  +  + G+        R+LLVLDDVW  +   W ++K       
Sbjct: 234 ILQDLRPYD-EGIIQMDEYTLQGELFELLESGRYLLVLDDVWKEE--DWDRIKAVFPHKR 290

Query: 299 AGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVD--MVD 356
              ++LT+           T  A     L     W++ ER     +++K    VD  M  
Sbjct: 291 GWKMLLTSRNEGLGLHADPTCFAFRPRILTPEQSWKLFER-IVSSRRDKTEFKVDEAMGK 349

Query: 357 KFVDRCVGSPLAARAVGSVLSNKTTPKEWNT--------LLSKSVIFDDDS-GILPILKL 407
           + V  C G PLA + +G +L+ K T  EW          ++ KS + DD+S  +  +L L
Sbjct: 350 EMVTYCGGLPLAVKVLGGLLAKKHTVLEWKRVHSNIVTHIVGKSGLSDDNSNSVYRVLSL 409

Query: 408 SYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNEL 466
           SY+DLP Q+K CF + A FP+DY+IDV++L   W+A   I P  +G  ++  G     EL
Sbjct: 410 SYEDLPMQLKHCFFYLAHFPEDYKIDVKILFNYWVAEGIITPFHDGSTIQDTGESYLEEL 469

Query: 467 ARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE-CVTVMGRPNSIQ 525
            RR+    V+E+ L             + C++HD+M ++ L   +EE  + V+  P +  
Sbjct: 470 VRRNMVV-VEESYLTSRI---------EYCQMHDMMREVCLSKAKEENFIRVVKVPTTTS 519

Query: 526 LLKDS-----SRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGF--PQHLLKYNSL 578
              ++     SR L    H  N  L     K     R+V+ FG  + F  P+       L
Sbjct: 520 TTINAQSPCRSRRLV--LHSGNA-LHMLGHKDNKKARSVLIFGVEEKFWKPRGFQCLPLL 576

Query: 579 RALCIP--NFRGRPCLIQAKHLHHLRYLNL 606
           R L +    F G         L HLR+L+L
Sbjct: 577 RVLDLSYVQFEGGKLPSSIGDLIHLRFLSL 606
>AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909
          Length = 908

 Score =  188 bits (478), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 181/654 (27%), Positives = 296/654 (45%), Gaps = 94/654 (14%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
            VS   EK    L  + + ++G++EQ + LKR+L ++  ++ DA+ +      V+ +LE 
Sbjct: 5   FVSFGLEKLWDLLSRESERLQGIDEQLDGLKRQLRSLQSLLKDADAKKHGSDRVRNFLED 64

Query: 73  LKKVAYEANDIFDEFKYEALRREAKK-NGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRR 131
           +K + ++A DI + +    LR E K    H R L       F T      R+ +   +  
Sbjct: 65  VKDLVFDAEDIIESYVLNKLRGEGKGVKKHVRRLAR-----FLTD-----RHKVASDIEG 114

Query: 132 IVQIIEVLVAEMNAFGFK----------YQRQSLASKQWRQTDSIIDYSEKDIVERSRET 181
           I + I  ++ EM +FG +           Q +    ++ RQT    D SE D+V    E 
Sbjct: 115 ITKRISDVIGEMQSFGIQQIIDGVRSLSLQERQRVQREIRQT--YPDSSESDLV--GVEQ 170

Query: 182 EKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLS 241
             +++V  L+EN+   V+ I GMGG+GKTT A+ +++   ++ HF    WVCVS +F L 
Sbjct: 171 SVEELVGHLVENDIYQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQFTLK 230

Query: 242 KIASKISMTTNEKDCDNVLQ--------KLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTC 293
            +  +I       D  N+LQ        KL Q +   R+LLVLDDVW +  + W ++K  
Sbjct: 231 HVWQRILQELQPHD-GNILQMDESALQPKLFQLLETGRYLLVLDDVWKK--EDWDRIKAV 287

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKP----S 349
             +     ++LT+           T      + L+    W++ ER  F  + E       
Sbjct: 288 FPRKRGWKMLLTSRNEGVGIHADPTCLTFRASILNPEESWKLCERIVFPRRDETEVRLDE 347

Query: 350 ELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTL---LSKSVI----FDDDS--G 400
           E+  M  + V  C G PLA +A+G +L+NK T  EW  +   +   ++     DD+S   
Sbjct: 348 EMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPEWKRVSDNIGSQIVGGSCLDDNSLNS 407

Query: 401 ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGN 460
           +  IL LSY+DLP+ +K  F + A FP+D +I  + L   W A       +G  ++  G 
Sbjct: 408 VNRILSLSYEDLPTHLKHRFLYLAHFPEDSKIYTQDLFNYWAAEGIY---DGSTIQDSGE 464

Query: 461 RIFNELARRSF-FQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMG 519
               EL RR+    D    SL          +F   C++HD+M ++ L   +EE      
Sbjct: 465 YYLEELVRRNLVIADNRYLSL----------EF-NFCQMHDMMREVCLSKAKEE------ 507

Query: 520 RPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNS-- 577
             N +Q++KD      +S   +N            P R+  F  H  G   H+L + +  
Sbjct: 508 --NFLQIIKDP-----TSTSTINAQ---------SPSRSRRFSIH-SGKAFHILGHRNNP 550

Query: 578 -LRALCIPNFRGRPCLIQAKHLHH---LRYLNLSH-SWNMERLPEEISILYNLQ 626
            +R+L +  F     +  A   H+   LR L+LS   +   +LP  I  L +L+
Sbjct: 551 KVRSLIVSRFEEDFWIRSASVFHNLTLLRVLDLSRVKFEGGKLPSSIGGLIHLR 604
>AT1G58390.1 | chr1:21690962-21693891 REVERSE LENGTH=908
          Length = 907

 Score =  188 bits (478), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 250/956 (26%), Positives = 392/956 (41%), Gaps = 138/956 (14%)

Query: 11  GPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWL 70
           G LVS   +K    L ++ +  +G+E+Q   LKR L  +   + DA+ +      V+  +
Sbjct: 3   GELVSFGIKKLWDLLSQECEQFQGVEDQVTGLKRDLNLLSSFLKDADAKKHTTAVVRNVV 62

Query: 71  EALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVK-LFPTHNRIMFRYTMGKKL 129
           E +K++ Y+A DI + +    L+ +  K     G+ M   +      +R      +G   
Sbjct: 63  EEIKEIVYDAEDIIETY---LLKEKLWKTS---GIKMRIRRHACIISDRRRNALDVGGIR 116

Query: 130 RRIVQIIEVLVAEMNAFGFK--------YQRQSLASKQWRQTDSIIDYSEKDIVERSRET 181
            RI  +I     +M +FG +         Q Q    ++ RQT S  DY E D V    E 
Sbjct: 117 TRISDVIR----DMQSFGVQQAIVDGGYMQPQGDRQREMRQTFSK-DY-ESDFV--GLEV 168

Query: 182 EKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLS 241
             +K+V  L++  ++ V+ I GMGGLGKTT A+ ++N   +K  F    WVCVS EF   
Sbjct: 169 NVKKLVGYLVDEENVQVVSITGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRK 228

Query: 242 KIASKI--SMTTNEKDCDNVLQKLQQEVSGKRF--------LLVLDDVWNRDVDKWSKLK 291
            +   I  ++T+ EK  D +LQ  + E+  K F        L+V DD+W +D D W  +K
Sbjct: 229 NVWQMILQNLTSREKK-DEILQMEEAELHDKLFQLLETSKSLIVFDDIW-KDED-WDLIK 285

Query: 292 TCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLT--TLDNRFLWEIIERRAFYLKKEKPS 349
                     V+LT+    E   + G ++  N     L     W + +R AF  K    S
Sbjct: 286 PIFPPNKGWKVLLTSQN--ESVAVRGDIKYLNFKPECLAIEDSWTLFQRIAFPKKDASES 343

Query: 350 ----ELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTL---LSKSVI---FDDDS 399
               E+ DM  + +  C G PLA + +G +L+ K T  +W  L   +   ++     ++S
Sbjct: 344 KVDEEMEDMGKQMLKHCGGLPLAIKVLGGLLAAKYTMHDWERLSVNIGSDIVGRTSSNNS 403

Query: 400 GILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSE---NGVGLE 456
            I  +L +S+++LPS +K CF + A FP+D++I+VE L   W A     +E   NG  ++
Sbjct: 404 SIYHVLSMSFEELPSYLKHCFLYLAHFPEDHKINVEKLSYCWAAEGISTAEDYHNGETIQ 463

Query: 457 KVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE--- 513
            VG     EL RR+            ++ RD       TC +HD+M ++ L+  +EE   
Sbjct: 464 DVGQSYLEELVRRNMI----------IWERDATASRFGTCHLHDMMREVCLFKAKEENFL 513

Query: 514 --CVTVMGRPNSIQLLKDS---SRHLFSSYHRMNTLLDAFIEKRIL--PLRTVMFFGH-- 564
              V  +G  +S      S   SR L   Y    TL    +E+ I    LR+++   H  
Sbjct: 514 QIAVKSVGVTSSSTGNSQSPCRSRRLV--YQCPTTL---HVERDINNPKLRSLVVLWHDL 568

Query: 565 ------LDGFPQHLLKYNSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEE 618
                 L G     LK   +  L   +F G        +L HLRYL+L  +  +  LP  
Sbjct: 569 WVENWKLLGTSFTRLKLLRVLDLFYVDFEGMKLPFGIGNLIHLRYLSLQDA-KVSHLPSS 627

Query: 619 ISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRH----LYTQGCTDLECMPPELRKVTALQ 674
           +  L  L              P     M  LR+    L+    T L      LR +  L+
Sbjct: 628 LGNLMLLIYLNLDVDTEFIFVPDVFMRMHELRYLKLPLHMHKKTRL-----SLRNLVKLE 682

Query: 675 TLTYFVVGNSS--DCSNVGEIHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLTHLCFK 732
           TL YF   +SS  D   +  +                              +  TH    
Sbjct: 683 TLVYFSTWHSSSKDLCGMTRLMTLAIRLTRVTSTETLSASISGLRNLEYLYIVGTH---- 738

Query: 733 WSNDIEKDPEHYQNVLGALRPHAKLQLLKVQSFKGTNFPTWMTDVCTFMNLTEIHLVDCP 792
                 K       VL  +  H K  LL +   +  +FP+ +    TF+ L+E  L + P
Sbjct: 739 -----SKKMREEGIVLDFI--HLKHLLLDLYMPRQQHFPSRL----TFVKLSECGLEEDP 787

Query: 793 LCKEIPKFWKLPALE-VLHLTGLNKLQSLCSGASDVIMCSAFQXXXXXXXXXXXXXXRWG 851
                     +P LE +LHL G+  L+    G   V     F                W 
Sbjct: 788 ----------MPILEKLLHLKGVILLKGSYCGRRMVCSGGGFPQLKKLEIVGLNKWEEWL 837

Query: 852 TMEGKLGDEAIFPVLEDIHIKNCPELTVIPEAPKIGTLKLEENKPHLSLLVVGSRY 907
             EG +      P+LE + I +C EL  IP+  +            L L+++G+R+
Sbjct: 838 VEEGSM------PLLETLSILDCEELKEIPDGLRF--------IYSLELVMLGTRW 879
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
          Length = 906

 Score =  186 bits (471), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 256/532 (48%), Gaps = 59/532 (11%)

Query: 9   VIGPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKA 68
           ++  +VS   EK    L ++Y+  +G+EEQ   L+  L  ++  +SDA+ +   R   + 
Sbjct: 6   MVDSIVSFGVEKLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSDADAKKQTRALARN 65

Query: 69  WLEALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNR-IMFRYT-MG 126
            LE +K++ Y+A DI + F  +              + M ++  FP   R I  + T + 
Sbjct: 66  CLEEIKEITYDAEDIIEIFLLKG------------SVNMRSLACFPGGRREIALQITSIS 113

Query: 127 KKLRRIVQIIEVLVAEMNAF-GFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQK 185
           K++ +++Q+++ L  + +   G     Q    ++ R T S    SE ++V   +  EK  
Sbjct: 114 KRISKVIQVMQNLGIKSDIMDGVDSHAQLERKRELRHTFS--SESESNLVGLEKNVEK-- 169

Query: 186 IVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIAS 245
           +V  L+ N+    + I G+GGLGKTT A+ I++  ++K HF    WVCVS EF    +  
Sbjct: 170 LVEELVGNDSSHGVSITGLGGLGKTTLARQIFDHDKVKSHFDGLAWVCVSQEFTRKDVWK 229

Query: 246 KI--SMTTNEKDC----DNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAA 299
            I  +++   KD     D++ +KL Q +  K+ L+V DD+W R  + W ++     +  A
Sbjct: 230 TILGNLSPKYKDSDLPEDDIQKKLFQLLETKKALIVFDDLWKR--EDWYRIAPMFPERKA 287

Query: 300 GSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPS-----ELVDM 354
           G  +L T+R   +     T +   LT   +   W++++R AF  +K         E+V M
Sbjct: 288 GWKVLLTSRNDAIHPHCVTFKPELLT---HDECWKLLQRIAFSKQKTITGYIIDKEMVKM 344

Query: 355 VDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIF-----------DDDSGILP 403
             +    C   PLA + +G +L  K T ++W  L+S+++I            +D S +  
Sbjct: 345 AKEMTKHCKRLPLAVKLLGGLLDAKHTLRQWK-LISENIISHIVVGGTSSNENDSSSVNH 403

Query: 404 ILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSEN--GVGLEKVGNR 461
           +L LS++ LP  +K C  + A +P+D+EI++E L  +W A       N  G  +  V + 
Sbjct: 404 VLSLSFEGLPGYLKHCLLYLASYPEDHEIEIERLSYVWAAEGITYPGNYEGATIRDVADL 463

Query: 462 IFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE 513
              EL +R+            +  RD L    + C++HDLM +I L   +EE
Sbjct: 464 YIEELVKRNMV----------ISERDALTSRFEKCQLHDLMREICLLKAKEE 505
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
          Length = 901

 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 253/541 (46%), Gaps = 62/541 (11%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
           +VS   +K  + L  + + + G++EQ + LKR+L  +  ++ DA+ +      V+ +LE 
Sbjct: 5   VVSFGVQKLWALLNRESERLNGIDEQVDGLKRQLRGLQSLLKDADAKKHGSDRVRNFLED 64

Query: 73  LKKVAYEANDIFDEFKYEALRREAKK-NGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRR 131
           +K + ++A DI + +    LR E K    H R L       F T      R+ +   +  
Sbjct: 65  VKDLVFDAEDIIESYVLNKLRGEGKGVKNHVRRLAC-----FLTD-----RHKVASDIEG 114

Query: 132 IVQIIEVLVAEMNAFGFKYQ------RQSLASKQWRQTDSIIDYSEKDIVERSRETEKQK 185
           I + I  ++ EM + G + Q        SL   Q     +  + SE D+V    E   ++
Sbjct: 115 ITKRISKVIGEMQSLGIQQQIIDGGRSLSLQDIQREIRQTFPNSSESDLV--GVEQSVEE 172

Query: 186 IVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIAS 245
           +V  ++E ++I V+ I GMGG+GKTT A+ I++   ++ HF    WVCVS +F    +  
Sbjct: 173 LVGPMVEIDNIQVVSISGMGGIGKTTLARQIFHHDLVRRHFDGFAWVCVSQQFTQKHVWQ 232

Query: 246 KISMTTNEKDCDNVLQKLQQEVSGK--------RFLLVLDDVWNRDVDKWSKLKTCLQQG 297
           +I       D + +LQ  +  + GK        R+L+VLDDVW    + W ++K    + 
Sbjct: 233 RILQELRPHDGE-ILQMDEYTIQGKLFQLLETGRYLVVLDDVWKE--EDWDRIKEVFPRK 289

Query: 298 AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDK 357
               ++LT+           T  +     L+ +  W++ ER      + +  E+  +  +
Sbjct: 290 RGWKMLLTSRNEGVGLHADPTCLSFRARILNPKESWKLFERIVPRRNETEYEEMEAIGKE 349

Query: 358 FVDRCVGSPLAARAVGSVLSNKTTPKEWN--------TLLSKSVIFDDDS--GILPILKL 407
            V  C G PLA + +G +L+NK T  EW          ++ KS + DD+S   +  IL L
Sbjct: 350 MVTYCGGLPLAVKVLGGLLANKHTASEWKRVSENIGAQIVGKSCL-DDNSLNSVYRILSL 408

Query: 408 SYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELA 467
           SY+DLP+ +K CF + A FP+DY+I    L   W A       +G+ +   G     EL 
Sbjct: 409 SYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIY---DGLTILDSGEDYLEELV 465

Query: 468 RRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLL 527
           RR+    + E S   +  R KLCQ          MHD+    MRE C++     N +Q++
Sbjct: 466 RRNLV--IAEKS--NLSWRLKLCQ----------MHDM----MREVCISKAKVENFLQII 507

Query: 528 K 528
           K
Sbjct: 508 K 508
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
          Length = 908

 Score =  182 bits (461), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 243/533 (45%), Gaps = 62/533 (11%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
            VS   EK    L  + + ++G++ Q + LKR+L ++  ++ DA+ +      V+ +LE 
Sbjct: 5   FVSFGLEKLWDLLSRESERLQGIDGQLDGLKRQLRSLQSLLKDADAKKHGSDRVRNFLED 64

Query: 73  LKKVAYEANDIFDEFKYEALRREAKK-NGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRR 131
           +K + ++A DI + +    L  + K    H R L       F T      R+ +   +  
Sbjct: 65  VKDLVFDAEDIIESYVLNKLSGKGKGVKKHVRRLA-----CFLTD-----RHKVASDIEG 114

Query: 132 IVQIIEVLVAEMNAFGFK----------YQRQSLASKQWRQTDSIIDYSEKDIVERSRET 181
           I + I  ++ EM +FG +           Q +    ++ RQT    D SE D+V    E 
Sbjct: 115 ITKRISEVIGEMQSFGIQQIIDGGRSLSLQERQRVQREIRQT--YPDSSESDLV--GVEQ 170

Query: 182 EKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLS 241
             +++V  L+EN+   V+ I GMGG+GKTT A+ +++   ++ HF    WVCVS +F   
Sbjct: 171 SVKELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQFTQK 230

Query: 242 KIASKISMTTNEKDCDNVLQ--------KLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTC 293
            +  +I       D D +LQ        KL Q +   R+L+VLDDVW +  + W  +K  
Sbjct: 231 HVWQRILQELQPHDGD-ILQMDEYALQRKLFQLLEAGRYLVVLDDVWKK--EDWDVIKAV 287

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKP----S 349
             +     ++LT+           T      + L+    W++ ER  F  + E       
Sbjct: 288 FPRKRGWKMLLTSRNEGVGIHADPTCLTFRASILNPEESWKLCERIVFPRRDETEVRLDE 347

Query: 350 ELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTL---LSKSVI----FDDDS--G 400
           E+  M  + V  C G PLA +A+G +L+NK T  EW  +   +   ++     DD+S   
Sbjct: 348 EMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPEWKRVFDNIGSQIVGGSWLDDNSLNS 407

Query: 401 ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGN 460
           +  IL LSY+DLP+ +K CF   A FP+D EI    L   W A       +G  +E  G 
Sbjct: 408 VYRILSLSYEDLPTHLKHCFLNLAHFPEDSEISTYSLFYYWAAEGIY---DGSTIEDSGE 464

Query: 461 RIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE 513
               EL RR+     D          + L    K C++HD+M ++ L   +EE
Sbjct: 465 YYLEELVRRNLVIADD----------NYLSWQSKYCQMHDMMREVCLSKAKEE 507
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
          Length = 857

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 255/538 (47%), Gaps = 60/538 (11%)

Query: 12  PLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLE 71
            +VS+  +K    LLE+   + G+ +Q + L+ +L  +   + DA+E+    + V+ W+ 
Sbjct: 4   AIVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESERVRNWVA 63

Query: 72  ALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAV--KLFPTHNRIMFRYTMGKKL 129
            +++ +Y+A DI + F  +A  R+ K        GM  V  +L    N  +  +++G ++
Sbjct: 64  GIREASYDAEDILEAFFLKAESRKQK--------GMKRVLRRLACILNEAVSLHSVGSEI 115

Query: 130 RRIVQIIEVLVAEMNAFGFK----YQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQK 185
           R I   +  + A M  FG K     +  SL+     Q  S     E ++V    E   +K
Sbjct: 116 REITSRLSKIAASMLDFGIKESMGREGLSLSDSLREQRQSFPYVVEHNLV--GLEQSLEK 173

Query: 186 IVRSLLENND-IMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIA 244
           +V  L+   + + V  I GMGGLGKTT AK I++  +++ HF    WV VS +     + 
Sbjct: 174 LVNDLVSGGEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWVYVSQDCRRRHVW 233

Query: 245 SKISMTTNEKDCDNVLQKLQQEVSGK---RF------LLVLDDVWNRDVDKWSKLKTCLQ 295
             I +  + KD +  +  L+ E  G+   RF      L+VLDD+W +D   W  LK    
Sbjct: 234 QDIFLNLSYKDENQRILSLRDEQLGEELHRFLKRNKCLIVLDDIWGKDA--WDCLKHVFP 291

Query: 296 QGAAGSVILTTTRLAEVAQIM---GTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELV 352
               GS I+ TTR  EVA      G +    L T +    WE++E+ +   ++     LV
Sbjct: 292 H-ETGSEIILTTRNKEVALYADPRGVLHEPQLLTCEES--WELLEKISLSGRENIEPMLV 348

Query: 353 DMVD----KFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLS--KSVIFDDDSG------ 400
             ++    + V RC G PLA   +G +L+ K+T  EW  +    KS + +  S       
Sbjct: 349 KKMEEIGKQIVVRCGGLPLAITVLGGLLATKSTWNEWQRVCENIKSYVSNGGSSNGSKNM 408

Query: 401 -ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFI----PSENGVGL 455
            +  +L LSY+ LP  +K CF + A +P+DYE+ V  LV   +A   +     +E G  +
Sbjct: 409 LVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVMPVKHTEAGTTV 468

Query: 456 EKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE 513
           E VG     EL +R         S+  + RRD +     TC++HDLM ++ L   ++E
Sbjct: 469 EDVGQDYLEELVKR---------SMVMVGRRDIVTSEVMTCRMHDLMREVCLQKAKQE 517
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
          Length = 847

 Score =  174 bits (441), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 182/694 (26%), Positives = 312/694 (44%), Gaps = 98/694 (14%)

Query: 1   MADLVTSMVIGPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQA 60
           M D +T  V+G        K  +YL+E+  ++ G+++  E LK +L  I   + + E   
Sbjct: 1   MVDAITEFVVG--------KIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCD 52

Query: 61  SHRQGVKAWLEALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIM 120
              +  K W + +  +AY+  D+ D + +  L +   + G  R   + + K    +N + 
Sbjct: 53  KEDEVSKEWTKLVLDIAYDVEDVLDTY-FLKLEKRLHRLGLMRLTNIISDKK-DAYNILD 110

Query: 121 FRYTMGKKLRRIVQIIEVLVAEMNAFG-FKYQRQSLASKQWRQTDSIIDYSEKDIVERSR 179
              T+    RR + +   L  EM   G F   R   ++ + R+            V R+R
Sbjct: 111 DIKTLK---RRTLDVTRKL--EMYGIGNFNEHRVVASTSRVRE------------VRRAR 153

Query: 180 ETEKQKIVRSLLEN--------------NDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEH 225
             ++++ V  L ++              N I ++ I GM GLGKT+ A+ ++N   +KE 
Sbjct: 154 SDDQEERVVGLTDDAKVLLTKLLDDDGDNKIYMISIFGMEGLGKTSLARKLFNSSDVKES 213

Query: 226 FQLNRWVCVSDEFDLSKIASKISMTTNEKDCDNVLQKLQQE---------VSGKRFLLVL 276
           F+   W  VS E +   I  +I +++ E+  +  L+K+ Q+         +  KR+L+V+
Sbjct: 214 FEYRVWTNVSGECNTRDILMRI-ISSLEETSEGELEKMAQQELEVYLHDILQEKRYLVVV 272

Query: 277 DDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIMGT-VQAHNLTTLDNRFLWEI 335
           DD+W  + +    LK  L     GS ++ TT +  VA+     V  HN+  L  +  W +
Sbjct: 273 DDIW--ESEALESLKRALPCSYQGSRVIITTSIRVVAEGRDKRVYTHNIRFLTFKESWNL 330

Query: 336 IERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIF 395
            E++AF    +   EL  +  + V +C G P     +  ++S K  P EWN + S   + 
Sbjct: 331 FEKKAFRYILKVDQELQKIGKEMVQKCGGLPRTTVVLAGLMSRKK-PNEWNDVWSSLRVK 389

Query: 396 DDDSGILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGL 455
           DD+  +  +  LS+ D+  ++KLCF + ++FP+DYE+DVE L++L +A  FI  +  + +
Sbjct: 390 DDNIHVSSLFDLSFKDMGHELKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTM 449

Query: 456 EKVGNRIFNELARRSFFQDVDETSLFKMYRRD--KLCQFRKTCKIHDLMHDIALYVMRE- 512
           E V          R + +D+   SL ++ +R   KL  FR    IHDL+ +  +   +E 
Sbjct: 450 EDVA---------RYYIEDLVYISLVEVVKRKKGKLMSFR----IHDLVREFTIKKSKEL 496

Query: 513 ECVTVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHL 572
             V V    +S      S R +       N L D  +  +   +R+ +FFG       ++
Sbjct: 497 NFVNVYDEQHSST---TSRREVVHHLMDDNYLCDRRVNTQ---MRSFLFFGKRRNDITYV 550

Query: 573 ----LKYNSLRALCIPNFRGRPCLIQAKH----------LHHLRYLNLSHSWNMERLPEE 618
               LK   LR L   N  G   + Q             L HLRYL ++ +  +  LP+ 
Sbjct: 551 ETITLKLKLLRVL---NLGGLHFICQGYSPWSLPDVIGGLVHLRYLGIADTV-VNNLPDF 606

Query: 619 ISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHL 652
           IS L  LQT              ++  +TSLRHL
Sbjct: 607 ISNLRFLQTLDASGNSFERMT--DLSNLTSLRHL 638
>AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050
          Length = 1049

 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 175/654 (26%), Positives = 285/654 (43%), Gaps = 91/654 (13%)

Query: 11  GPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWL 70
           G L+S   +   + L ++ ++ +G+E+Q   LKR L  +   + DA+ +      VK  +
Sbjct: 3   GELISFGIQNLWNLLSQECELFQGVEDQVTELKRDLNLLSSFLKDADAKKHTSAVVKNCV 62

Query: 71  EALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLR 130
           E +K++ Y+  D  + F  E  +   K +G  + +   A  + P   R  +   +G    
Sbjct: 63  EEIKEIIYDGEDTIETFVLE--QNLGKTSGIKKSIRRLAC-IIPDRRR--YALGIGGLSN 117

Query: 131 RIVQIIEVLVAEMNAFGFKYQ------RQSLASKQWRQTDSIIDYSEKDIVERSRETEKQ 184
           RI ++I     +M +FG +        +Q    KQ           + D V    E   +
Sbjct: 118 RISKVIR----DMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDDDSDFV--GLEANVK 171

Query: 185 KIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIA 244
           K+V  L++  ++ V+ I GMGGLGKTT AK ++N   +K  F    WVCVS +F    + 
Sbjct: 172 KLVGYLVDEANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMNVW 231

Query: 245 SKISMTTNEKDCDNVLQKLQQE---------VSGKRFLLVLDDVWNRDVDKWSKLKTCLQ 295
            KI      K+ +  + ++ Q+         +   + L+VLDD+W +  + W  +K    
Sbjct: 232 QKILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEK--EDWELIKPIFP 289

Query: 296 QGAAGSVILTTTRLAEVAQIMGT----VQAHNLTTLDNRFLWEIIERRAFYLK------- 344
               G  +L T+R   VA    T     +   LTT D+   W + +R A  +K       
Sbjct: 290 P-TKGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDS---WTLFQRIALPMKDAAEFKI 345

Query: 345 KEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSG---- 400
            E+  EL  ++   +  C G PLA R +G +L+ K T  +W   LS+++      G    
Sbjct: 346 DEEKEELGKLM---IKHCGGLPLAIRVLGGMLAEKYTSHDWRR-LSENIGSHLVGGRTNF 401

Query: 401 -------ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMAND-FIPSE-N 451
                     +L LS+++LPS +K CF + A FP DYEI+V+ L   W A   F P   +
Sbjct: 402 NDDNNNTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYYWAAEGIFQPRHYD 461

Query: 452 GVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMR 511
           G  +  VG+    EL RR+            +  RD      +TC +HD+M ++ L   +
Sbjct: 462 GEIIRDVGDVYIEELVRRNMV----------ISERDVKTSRFETCHLHDMMREVCLLKAK 511

Query: 512 EE-----CVTVMGRPNSIQLLKDSSRHLFSSY----HRMNTLLDAFIEKRILPLRTVMFF 562
           EE       +     NS+ ++  +SR L   Y         + D  +   ++   T MF+
Sbjct: 512 EENFLQITSSRTSTGNSLSIV--TSRRLVYQYPITLDVEKDINDPKLRSLVVVANTYMFW 569

Query: 563 GHLDGFPQHLL-----KYNSLRALCI--PNFRGRPCLIQAKHLHHLRYLNLSHS 609
           G   G+   LL     +   LR L I     +G         L HLRYLNL H+
Sbjct: 570 G---GWSWMLLGSSFIRLELLRVLDIHRAKLKGGKLASSIGQLIHLRYLNLKHA 620
>AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050
          Length = 1049

 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 175/654 (26%), Positives = 285/654 (43%), Gaps = 91/654 (13%)

Query: 11  GPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWL 70
           G L+S   +   + L ++ ++ +G+E+Q   LKR L  +   + DA+ +      VK  +
Sbjct: 3   GELISFGIQNLWNLLSQECELFQGVEDQVTELKRDLNLLSSFLKDADAKKHTSAVVKNCV 62

Query: 71  EALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLR 130
           E +K++ Y+  D  + F  E  +   K +G  + +   A  + P   R  +   +G    
Sbjct: 63  EEIKEIIYDGEDTIETFVLE--QNLGKTSGIKKSIRRLAC-IIPDRRR--YALGIGGLSN 117

Query: 131 RIVQIIEVLVAEMNAFGFKYQ------RQSLASKQWRQTDSIIDYSEKDIVERSRETEKQ 184
           RI ++I     +M +FG +        +Q    KQ           + D V    E   +
Sbjct: 118 RISKVIR----DMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDDDSDFV--GLEANVK 171

Query: 185 KIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIA 244
           K+V  L++  ++ V+ I GMGGLGKTT AK ++N   +K  F    WVCVS +F    + 
Sbjct: 172 KLVGYLVDEANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMNVW 231

Query: 245 SKISMTTNEKDCDNVLQKLQQE---------VSGKRFLLVLDDVWNRDVDKWSKLKTCLQ 295
            KI      K+ +  + ++ Q+         +   + L+VLDD+W +  + W  +K    
Sbjct: 232 QKILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEK--EDWELIKPIFP 289

Query: 296 QGAAGSVILTTTRLAEVAQIMGT----VQAHNLTTLDNRFLWEIIERRAFYLK------- 344
               G  +L T+R   VA    T     +   LTT D+   W + +R A  +K       
Sbjct: 290 P-TKGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDS---WTLFQRIALPMKDAAEFKI 345

Query: 345 KEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSG---- 400
            E+  EL  ++   +  C G PLA R +G +L+ K T  +W   LS+++      G    
Sbjct: 346 DEEKEELGKLM---IKHCGGLPLAIRVLGGMLAEKYTSHDWRR-LSENIGSHLVGGRTNF 401

Query: 401 -------ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMAND-FIPSE-N 451
                     +L LS+++LPS +K CF + A FP DYEI+V+ L   W A   F P   +
Sbjct: 402 NDDNNNTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYYWAAEGIFQPRHYD 461

Query: 452 GVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMR 511
           G  +  VG+    EL RR+            +  RD      +TC +HD+M ++ L   +
Sbjct: 462 GEIIRDVGDVYIEELVRRNMV----------ISERDVKTSRFETCHLHDMMREVCLLKAK 511

Query: 512 EE-----CVTVMGRPNSIQLLKDSSRHLFSSY----HRMNTLLDAFIEKRILPLRTVMFF 562
           EE       +     NS+ ++  +SR L   Y         + D  +   ++   T MF+
Sbjct: 512 EENFLQITSSRTSTGNSLSIV--TSRRLVYQYPITLDVEKDINDPKLRSLVVVANTYMFW 569

Query: 563 GHLDGFPQHLL-----KYNSLRALCI--PNFRGRPCLIQAKHLHHLRYLNLSHS 609
           G   G+   LL     +   LR L I     +G         L HLRYLNL H+
Sbjct: 570 G---GWSWMLLGSSFIRLELLRVLDIHRAKLKGGKLASSIGQLIHLRYLNLKHA 620
>AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018
          Length = 1017

 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 188/720 (26%), Positives = 304/720 (42%), Gaps = 80/720 (11%)

Query: 11  GPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWL 70
           G L+S   +   + L ++ ++ +G+E+Q   LKR L  +   + DA  +      VK  +
Sbjct: 3   GELISFGIQNLWNLLSQECELFQGVEDQVTELKRDLNMLSSFLKDANAKKHTSAVVKNCV 62

Query: 71  EALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLR 130
           E +K++ Y+  D  + F  E  +   K +G  + +   A  + P   R  +   +G    
Sbjct: 63  EEIKEIIYDGEDTIETFVLE--QNLGKTSGIKKSIRRLAC-IIPDRRR--YALGIGGLSN 117

Query: 131 RIVQIIEVLVAEMNAFGFKY--------QRQSLASKQWRQTDSIIDYSEKDIVERSRETE 182
           RI ++I     +M +FG +         Q Q    ++ RQ  S  D S  D V    E  
Sbjct: 118 RISKVIR----DMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDS--DFV--GLEAN 169

Query: 183 KQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSK 242
            +K+V  L++  ++ V+ I GMGGLGKTT AK ++N   +K  F    WVCVS +F    
Sbjct: 170 VKKLVGYLVDEANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMN 229

Query: 243 IASKISMTTNEKDCDNVLQKLQQE---------VSGKRFLLVLDDVWNRDVDKWSKLKTC 293
           +  KI      K+ +  + ++ Q+         +   + L+VLDD+W +  + W  +K  
Sbjct: 230 VWQKILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEK--EDWELIKPI 287

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGT----VQAHNLTTLDNRFLWEIIERRAFYLK----- 344
                 G  +L T+R   VA    T     +   LTT D+   W + +R A  +K     
Sbjct: 288 FPP-TKGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDS---WTLFQRIALPMKDAAEF 343

Query: 345 --KEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSG-- 400
              E+  EL  ++   +  C G PLA R +G +L+ K T  +W   LS+++      G  
Sbjct: 344 KIDEEKEELGKLM---IKHCGGLPLAIRVLGGMLAEKYTSHDWRR-LSENIGSHLVGGRT 399

Query: 401 ---------ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMAND-FIPSE 450
                       +L LS+++LPS +K CF + A FP+DYEI VE L   W A   F P  
Sbjct: 400 NFNDDNNNTCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEGIFQPRH 459

Query: 451 -NGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYV 509
            +G  +  VG+    EL RR+            +  RD      +TC +HD+M ++ L  
Sbjct: 460 YDGETIRDVGDVYIEELVRRNMV----------ISERDVKTSRFETCHLHDMMREVCLLK 509

Query: 510 MREECV--TVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDG 567
            +EE        RP++  L    +   F   +     ++  I    L    V+  G  + 
Sbjct: 510 AKEENFLQITSSRPSTANLQSTVTSRRFVYQYPTTLHVEKDINNPKLRALVVVTLGSWNL 569

Query: 568 FPQHLLKYNSLRALCI--PNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNL 625
                 +   LR L +     +G         L HLRYL+L ++  +  +P  +  L  L
Sbjct: 570 AGSSFTRLELLRVLDLIEVKIKGGKLASCIGKLIHLRYLSLEYA-EVTHIPYSLGNLKLL 628

Query: 626 QTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNSS 685
                         P  +  M  LR+L        +    EL  +  L+TL  F   NSS
Sbjct: 629 IYLNLASFGRSTFVPNVLMGMQELRYLALPSDMGRKT-KLELSNLVKLETLENFSTENSS 687
>AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856
          Length = 855

 Score =  167 bits (422), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 188/720 (26%), Positives = 304/720 (42%), Gaps = 80/720 (11%)

Query: 11  GPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWL 70
           G L+S   +   + L ++ ++ +G+E+Q   LKR L  +   + DA  +      VK  +
Sbjct: 3   GELISFGIQNLWNLLSQECELFQGVEDQVTELKRDLNMLSSFLKDANAKKHTSAVVKNCV 62

Query: 71  EALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLR 130
           E +K++ Y+  D  + F  E  +   K +G  + +   A  + P   R  +   +G    
Sbjct: 63  EEIKEIIYDGEDTIETFVLE--QNLGKTSGIKKSIRRLAC-IIPDRRR--YALGIGGLSN 117

Query: 131 RIVQIIEVLVAEMNAFGFKY--------QRQSLASKQWRQTDSIIDYSEKDIVERSRETE 182
           RI ++I     +M +FG +         Q Q    ++ RQ  S  D S  D V    E  
Sbjct: 118 RISKVIR----DMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDS--DFV--GLEAN 169

Query: 183 KQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSK 242
            +K+V  L++  ++ V+ I GMGGLGKTT AK ++N   +K  F    WVCVS +F    
Sbjct: 170 VKKLVGYLVDEANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMN 229

Query: 243 IASKISMTTNEKDCDNVLQKLQQE---------VSGKRFLLVLDDVWNRDVDKWSKLKTC 293
           +  KI      K+ +  + ++ Q+         +   + L+VLDD+W +  + W  +K  
Sbjct: 230 VWQKILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEK--EDWELIKPI 287

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGT----VQAHNLTTLDNRFLWEIIERRAFYLK----- 344
                 G  +L T+R   VA    T     +   LTT D+   W + +R A  +K     
Sbjct: 288 FPP-TKGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDS---WTLFQRIALPMKDAAEF 343

Query: 345 --KEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSG-- 400
              E+  EL  ++   +  C G PLA R +G +L+ K T  +W   LS+++      G  
Sbjct: 344 KIDEEKEELGKLM---IKHCGGLPLAIRVLGGMLAEKYTSHDWRR-LSENIGSHLVGGRT 399

Query: 401 ---------ILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMAND-FIPSE 450
                       +L LS+++LPS +K CF + A FP+DYEI VE L   W A   F P  
Sbjct: 400 NFNDDNNNTCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEGIFQPRH 459

Query: 451 -NGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYV 509
            +G  +  VG+    EL RR+            +  RD      +TC +HD+M ++ L  
Sbjct: 460 YDGETIRDVGDVYIEELVRRNMV----------ISERDVKTSRFETCHLHDMMREVCLLK 509

Query: 510 MREECV--TVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDG 567
            +EE        RP++  L    +   F   +     ++  I    L    V+  G  + 
Sbjct: 510 AKEENFLQITSSRPSTANLQSTVTSRRFVYQYPTTLHVEKDINNPKLRALVVVTLGSWNL 569

Query: 568 FPQHLLKYNSLRALCI--PNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNL 625
                 +   LR L +     +G         L HLRYL+L ++  +  +P  +  L  L
Sbjct: 570 AGSSFTRLELLRVLDLIEVKIKGGKLASCIGKLIHLRYLSLEYA-EVTHIPYSLGNLKLL 628

Query: 626 QTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNSS 685
                         P  +  M  LR+L        +    EL  +  L+TL  F   NSS
Sbjct: 629 IYLNLASFGRSTFVPNVLMGMQELRYLALPSDMGRKT-KLELSNLVKLETLENFSTENSS 687
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
          Length = 847

 Score =  166 bits (419), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 189/723 (26%), Positives = 319/723 (44%), Gaps = 97/723 (13%)

Query: 1   MADLVTSMVIGPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQA 60
           M D VT  V+         K   YL+ +   + G+++  E LK +L  I   + D E + 
Sbjct: 1   MVDAVTGFVLN--------KIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEARE 52

Query: 61  SHRQGVKAWLEALKKVAYEANDIFDEF--KYEALRREAKKNGHYRGLG--MDAVKLFPTH 116
              +  K W + +  +AY+  D+ D +  K E              +G   DA       
Sbjct: 53  REDEVSKEWTKLVLDIAYDIEDVLDTYFLKLEERSLRRGLLRLTNKIGKKRDA------- 105

Query: 117 NRIMFRYTMGKKLRRIVQIIEVLVAEMNAFG---FKYQR-QSLASKQWRQTDSIIDYSEK 172
                 Y + + +R + + I  +  +   FG   F   R +++ + + RQ        ++
Sbjct: 106 ------YNIVEDIRTLKRRILDITRKRETFGIGSFNEPRGENITNVRVRQLRRAPPVDQE 159

Query: 173 DIVERSRETEKQKIVRSLLEN--NDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNR 230
           ++V    +  K  +V+ L +N  +   ++ I GMGGLGKT  A+ +YN   +K  F    
Sbjct: 160 ELVVGLEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKRRFDCRA 219

Query: 231 WVCVSDEFDLSKI---------------ASKISMTTNEKDCDNVLQKLQQEVSGKRFLLV 275
           W  VS E+    I                 KI M   +++ +  L  L   + GK +++V
Sbjct: 220 WTYVSQEYKTRDILIRIIRSLGIVSAEEMEKIKMFEEDEELEVYLYGL---LEGKNYMVV 276

Query: 276 LDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQ-IMGTVQAHNLTTLDNRFLWE 334
           +DDVW+ D   W  LK  L     GS ++ TTR+  +A+ + GTV AH L  L     W 
Sbjct: 277 VDDVWDPDA--WESLKRALPCDHRGSKVIITTRIRAIAEGVEGTVYAHKLRFLTFEESWT 334

Query: 335 IIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSK--S 392
           + ER+AF   ++   +L     + V +C G PLA   +  +LS K T  EW+ + +    
Sbjct: 335 LFERKAFSNIEKVDEDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKRT-NEWHEVCASLWR 393

Query: 393 VIFDDDSGILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENG 452
            + D+   I  +  LS+ ++  ++KLCF + ++FP+DYEI VE L+ L +A  FI  +  
Sbjct: 394 RLKDNSIHISTVFDLSFKEMRHELKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFIQEDEE 453

Query: 453 VGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMRE 512
           + +E V     +EL  RS  +        +   R K+     +C+IHDL+ D+A+   +E
Sbjct: 454 MMMEDVARCYIDELVDRSLVKA-------ERIERGKVM----SCRIHDLLRDLAIKKAKE 502

Query: 513 ECVTVMGRPNSIQLLKDSSR-----HLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDG 567
             +  +   N  Q   D  R     HL + Y+    L D  + KR   +R+ +F G   G
Sbjct: 503 --LNFVNVYNEKQHSSDICRREVVHHLMNDYY----LCDRRVNKR---MRSFLFIGERRG 553

Query: 568 FPQHLLKYNSLRALCIPNFRGRPCLIQAKHLH-----------HLRYLNLSHSWNMERLP 616
           F         L+ L + N  G   L  +K++            HLRYL ++ ++ +  LP
Sbjct: 554 FGYVNTTNLKLKLLRVLNMEG--LLFVSKNISNTLPDVIGELIHLRYLGIADTY-VSILP 610

Query: 617 EEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTL 676
             IS L  LQT              ++  +TSLRH+  +     EC+  E   +  L+++
Sbjct: 611 ASISNLRFLQTLDASGNDPFQYTT-DLSKLTSLRHVIGKFVG--ECLIGEGVNLQTLRSI 667

Query: 677 TYF 679
           + +
Sbjct: 668 SSY 670
>AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900
          Length = 899

 Score =  163 bits (412), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 241/533 (45%), Gaps = 59/533 (11%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
           LVS   EK    L ++Y   +G+E+Q   LK  L  +   + DA+ +    + V+  +E 
Sbjct: 3   LVSFGVEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEE 62

Query: 73  LKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRI 132
           +K + Y+  DI + F  +      +K    RG+ M  +K F +   IM R  +   +  I
Sbjct: 63  IKDIVYDTEDIIETFILK------EKVEMKRGI-MKRIKRFAS--TIMDRRELASDIGGI 113

Query: 133 VQIIEVLVAEMNAFGFKY-----QRQS--LASKQWRQTDSIIDYSEKDIVERSRETEKQK 185
            + I  ++ +M +FG +       R S  L  +Q     +    SE D V    E   +K
Sbjct: 114 SKRISKVIQDMQSFGVQQIITDGSRSSHPLQERQREMRHTFSRDSENDFV--GMEANVKK 171

Query: 186 IVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIAS 245
           +V  L+E +D  ++ + GMGGLGKTT A+ ++N   +K+ F    WV VS EF    +  
Sbjct: 172 LVGYLVEKDDYQIVSLTGMGGLGKTTLARQVFNHDVVKDRFDGFAWVSVSQEFTRISVWQ 231

Query: 246 KISMTTNEKDCDNVLQKLQQE---------VSGKRFLLVLDDVWNRDVDKWSKLKTCLQQ 296
            I      K+  + +Q +++          +   + L+VLDD+W    + W  +K     
Sbjct: 232 TILQNLTSKERKDEIQNMKEADLHDDLFRLLESSKTLIVLDDIWKE--EDWDLIKPIFPP 289

Query: 297 GAAGSVILTTTRLAEVAQIMGTV----QAHNLTTLDNRFLWEIIERRAFYLKKEKP---- 348
                V+L T+R   +A    T     +   L+  D+   W + +  A   K        
Sbjct: 290 KKGWKVLL-TSRTESIAMRGDTTYISFKPKCLSIPDS---WTLFQSIAMPRKDTSEFKVD 345

Query: 349 SELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSK--SVIFDDDSG----IL 402
            E+ +M  K +  C G  LA + +G +L+ K T  +W  L     S I +  SG    I 
Sbjct: 346 EEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLSENIGSHIVERTSGNNSSID 405

Query: 403 PILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSE--NGVGLEKVGN 460
            +L +S+++LP+ +K CF + A FP+D+EIDVE L   W A         +G  +   G+
Sbjct: 406 HVLSVSFEELPNYLKHCFLYLAHFPEDHEIDVEKLHYYWAAEGISERRRYDGETIRDTGD 465

Query: 461 RIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE 513
               EL RR+            +  RD +    +TC++HD+M +I L+  +EE
Sbjct: 466 SYIEELVRRNMV----------ISERDVMTSRFETCRLHDMMREICLFKAKEE 508
>AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901
          Length = 900

 Score =  163 bits (412), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 185/728 (25%), Positives = 309/728 (42%), Gaps = 99/728 (13%)

Query: 9   VIGPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKA 68
           ++  +VS   EK    L ++Y+  +G+E++   LK  L  +   + DAE + +  Q V+ 
Sbjct: 1   MVEAIVSFGVEKLWDRLTQEYEQFQGVEDRIAELKSNLNLLKSFLKDAEAKKNTSQMVRH 60

Query: 69  WLEALKKVAYEANDIFDEFKYEALRREAKKNGHYRGLG-MDAVKLFPTHNRIMFRYTMGK 127
            +E +K++ Y+  ++ + F  +   R  K++G  R +  +  +K+    +R  F   +G 
Sbjct: 61  CVEEIKEIVYDTENMIETFILKEAAR--KRSGIIRRITKLTCIKV----HRWEFASDIGG 114

Query: 128 KLRRIVQIIEVLVAEMNAFGFKYQ----RQSLASKQWRQTDSIIDYS---EKDIVERSRE 180
             +RI ++I+    +M++FG +       QS    Q R+ +    +S   E D V    E
Sbjct: 115 ISKRISKVIQ----DMHSFGVQQMISDGSQSSHLLQEREREMRQTFSRGYESDFV--GLE 168

Query: 181 TEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDL 240
              +K+V  L+E +DI ++ + GMGGLGKTT A+ ++N   +K  F    WVCVS EF  
Sbjct: 169 VNVKKLVGYLVEEDDIQIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTR 228

Query: 241 SKIASKISMT-TNEKDCDNVLQKLQQEVSGKRF--------LLVLDDVWNRDVDKWSKLK 291
             +   I    T+ +  D +LQ  + E+  + F        L+V DD+W    + W  + 
Sbjct: 229 KNVWQMILQNLTSRETKDEILQMEEAELHDELFQLLETSKSLIVFDDIWKE--EDWGLIN 286

Query: 292 TCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAF------YLKK 345
                      +    R           +   LT L++   W + +R A         K 
Sbjct: 287 PIFPPKKETIAMHGNRRYV-------NFKPECLTILES---WILFQRIAMPRVDESEFKV 336

Query: 346 EKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTL-------LSKSVIFDD- 397
           +K  E+  M  + +  C G PLA + +G +L+ K T  +W  L       +     F D 
Sbjct: 337 DKEMEM--MGKQMIKYCGGLPLAVKVLGGLLAAKYTFHDWKRLSENIGCHIVGRTDFSDG 394

Query: 398 -DSGILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSE--NGVG 454
            +S +  +L LS+++LPS +K CF + A FP+D+ I VE L   W A   +     +G  
Sbjct: 395 NNSSVYHVLSLSFEELPSYLKHCFLYLAHFPEDHNIKVEKLSYCWAAEGILEPRHYHGQT 454

Query: 455 LEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREEC 514
           +  VG     EL RR+            +  RD      + C +HD+M ++ L   +EE 
Sbjct: 455 IRDVGESYIEELVRRNMV----------IAERDVTTLRFEACHLHDMMREVCLLKAKEEN 504

Query: 515 VTVMGR---PNSIQLLKDSSRHLFS----SYH--------RMNTLLDAFIEKRILPLRTV 559
              +     P +      +SR   S    + H        ++ +LL  +  +R    ++ 
Sbjct: 505 FVQIASILPPTANSQYPGTSRRFVSQNPTTLHVSRDINNPKLQSLLIVWENRR----KSW 560

Query: 560 MFFGHLDGFPQHLLKYNSLRALCI--PNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPE 617
              G         ++   LR L +    F GR        L HLRYLNL  +  + RLP 
Sbjct: 561 KLLG------SSFIRLELLRVLDLYKAKFEGRNLPSGIGKLIHLRYLNLDLA-RVSRLPS 613

Query: 618 EISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLT 677
            +  L  L              P  +  M  LR+L     T  E +   L  +  L+TL 
Sbjct: 614 SLGNLRLLIYLDINVCTKSLFVPNCLMGMHELRYLRLPFNTSKE-IKLGLCNLVNLETLE 672

Query: 678 YFVVGNSS 685
            F   NSS
Sbjct: 673 NFSTENSS 680
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
          Length = 926

 Score =  162 bits (409), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 283/628 (45%), Gaps = 89/628 (14%)

Query: 74  KKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIV 133
           + +AY+  DI DEF Y         +G+     +     FP +  +  R+++ +KL  + 
Sbjct: 72  RDLAYQIEDILDEFGYHI-------HGYRSCAKIWRAFHFPRY--MWARHSIAQKLGMVN 122

Query: 134 QIIEVLVAEMNAFGFKYQRQSL-------ASKQWRQ--TDSIIDYSEKDIVERSRETEKQ 184
            +I+ +   M  +      Q+           +W    ++S + +SE  +V    +  K 
Sbjct: 123 VMIQSISDSMKRYYHSENYQAALLPPIDDGDAKWVNNISESSLFFSENSLV--GIDAPKG 180

Query: 185 KIVRSLLENN-DIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKI 243
           K++  LL      +V+ +VGMGG GKTT +  I+    ++ HF+   WV +S  + +  +
Sbjct: 181 KLIGRLLSPEPQRIVVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSYVIEDV 240

Query: 244 -ASKISMTTNEKDCD-----------NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLK 291
             + I     E D              +++KL + +  KR+++VLDDVW   +  W ++ 
Sbjct: 241 FRTMIKEFYKEADTQIPAELYSLGYRELVEKLVEYLQSKRYIVVLDDVWTTGL--WREIS 298

Query: 292 TCLQQGAAGSVILTTTRLAEVAQI---MGTVQAHNLTTLDNRFLWEIIERRAF--YLKKE 346
             L  G  GS ++ TTR   VA     +G+ + H +  L     W +   +AF   L++ 
Sbjct: 299 IALPDGIYGSRVMMTTRDMNVASFPYGIGSTK-HEIELLKEDEAWVLFSNKAFPASLEQC 357

Query: 347 KPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILK 406
           +   L  +  K V+RC G PLA  ++GS++S K    EW  + S      +++  L I++
Sbjct: 358 RTQNLEPIARKLVERCQGLPLAIASLGSMMSTKKFESEWKKVYSTLNWELNNNHELKIVR 417

Query: 407 ----LSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRI 462
               LS++DLP  +K CF +C++FP +Y +  + L+++WMA  F+    GV  E+V +  
Sbjct: 418 SIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAEEVADSY 477

Query: 463 FNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVM---- 518
            NEL  R+  Q +    L+  + R       K  K+HD++ +IAL V + E    +    
Sbjct: 478 LNELVYRNMLQVI----LWNPFGRP------KAFKMHDVIWEIALSVSKLERFCDVYNDD 527

Query: 519 --GRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILP-------LRTVMFFGHLDGFP 569
             G   +  +    SRHL              I+K + P       L +++         
Sbjct: 528 SDGDDAAETMENYGSRHL-------------CIQKEMTPDSIRATNLHSLLVCSSAKHKM 574

Query: 570 QHLLKYNSLRALCIPN--FRGRP-CLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
           + L   N LRAL + +      P CL+    + +L+YLNLS +  ++ LP+    L NL+
Sbjct: 575 ELLPSLNLLRALDLEDSSISKLPDCLVT---MFNLKYLNLSKT-QVKELPKNFHKLVNLE 630

Query: 627 TXXXXXXXXXXXXPKNMKYMTSLRHLYT 654
           T            P  M  +  LR+L T
Sbjct: 631 T-LNTKHSKIEELPLGMWKLKKLRYLIT 657
>AT1G58602.1 | chr1:21760167-21763765 FORWARD LENGTH=1139
          Length = 1138

 Score =  161 bits (408), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 180/723 (24%), Positives = 299/723 (41%), Gaps = 80/723 (11%)

Query: 11  GPLVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWL 70
           G LVS    K    L  +Y + +G+E+Q   LK  L  +   + DA+ +      V+  +
Sbjct: 3   GELVSFAVNKLWDLLSHEYTLFQGVEDQVAELKSDLNLLKSFLKDADAKKHTSALVRYCV 62

Query: 71  EALKKVAYEANDIFDEF-KYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKL 129
           E +K + Y+A D+ + F + E L   +    H + L      + P    I     +G   
Sbjct: 63  EEIKDIVYDAEDVLETFVQKEKLGTTSGIRKHIKRLTC----IVPDRREIAL--YIGHVS 116

Query: 130 RRIVQIIEVLVAEMNAFGFKYQ-----RQSLASKQWRQTDSIIDYSEKDIVERSRETEKQ 184
           +RI ++I     +M +FG +          L +++     +    +E   V  + E   +
Sbjct: 117 KRITRVIR----DMQSFGVQQMIVDDYMHPLRNREREIRRTFPKDNESGFV--ALEENVK 170

Query: 185 KIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIA 244
           K+V   +E ++  V+ I GMGGLGKTT A+ ++N   + + F    WV VS +F L  + 
Sbjct: 171 KLVGYFVEEDNYQVVSITGMGGLGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVW 230

Query: 245 SKI--------------SMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKL 290
             I                   E     + ++L Q +   + L+VLDD+W +  + W  +
Sbjct: 231 QNILGDLKPKEEETKEEEKKILEMTEYTLQRELYQLLEMSKSLIVLDDIWKK--EDWEVI 288

Query: 291 KTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKK----E 346
           K          ++LT+   + VA             L     W++ +R AF +      E
Sbjct: 289 KPIFPPTKGWKLLLTSRNESIVAPTNTKYFNFKPECLKTDDSWKLFQRIAFPINDASEFE 348

Query: 347 KPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEW--------NTLLSKSVIFDDD 398
              E+  + +K ++ C G PLA + +G +L+ K T  +W        + L+     F+DD
Sbjct: 349 IDEEMEKLGEKMIEHCGGLPLAIKVLGGMLAEKYTSHDWRRLSENIGSHLVGGRTNFNDD 408

Query: 399 --SGILPILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMAND-FIPSE-NGVG 454
             +    +L LS+++LPS +K CF + A FP+DYEI VE L   W A + F P   +G  
Sbjct: 409 NNNSCNYVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEEIFQPRHYDGEI 468

Query: 455 LEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE- 513
           +  VG+    EL RR+            +  RD      +TC +HD+M ++ L   +EE 
Sbjct: 469 IRDVGDVYIEELVRRNMV----------ISERDVKTSRFETCHLHDMMREVCLLKAKEEN 518

Query: 514 CVTVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRI----LPLRTVMFFGHLDGFP 569
            + +   P S    + +       Y    TL    +EK I    L    V+  G  +   
Sbjct: 519 FLQITSNPPSTANFQSTVTSRRLVYQYPTTL---HVEKDINNPKLRSLVVVTLGSWNMAG 575

Query: 570 QHLLKYNSLRALCI--PNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEIS-----IL 622
               +   LR L +     +G         L HLRYL+L ++  +  +P  +      I 
Sbjct: 576 SSFTRLELLRVLDLVQAKLKGGKLASCIGKLIHLRYLSLEYA-EVTHIPYSLGNLKLLIY 634

Query: 623 YNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVG 682
            NL              P  +  M  LR+L      + +    EL  +  L+TL  F   
Sbjct: 635 LNLHI---SLSSRSNFVPNVLMGMQELRYLALPSLIERKT-KLELSNLVKLETLENFSTK 690

Query: 683 NSS 685
           NSS
Sbjct: 691 NSS 693
>AT1G10920.1 | chr1:3644587-3647004 REVERSE LENGTH=728
          Length = 727

 Score =  154 bits (388), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 237/518 (45%), Gaps = 73/518 (14%)

Query: 144 NAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVRSLLENNDIMVLPIVG 203
            A     Q +    K+ RQT    + SE D+V    E   + +   L+EN++I V+ I G
Sbjct: 12  GASSMSLQERQREQKEIRQT--FANSSESDLV--GVEQSVEALAGHLVENDNIQVVSISG 67

Query: 204 MGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKISMTTNEKDCD------ 257
           MGG+GKTT A+ +++   ++ HF    WV VS +F    +  +I      ++ D      
Sbjct: 68  MGGIGKTTLARQVFHHDMVQRHFDGFAWVFVSQQFTQKHVWQRIWQELQPQNGDISHMDE 127

Query: 258 NVLQ-KLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIM 316
           ++LQ KL + +   R+L+VLDDVW    + W ++K    +     ++LT+    E   I 
Sbjct: 128 HILQGKLFKLLETGRYLVVLDDVWKE--EDWDRIKAVFPRKRGWKMLLTSRN--EGVGIH 183

Query: 317 GTVQAHNLTT--LDNRFLWEIIERRAFYLKKEKPS--------ELVDMVDKFVDRCVGSP 366
              ++    T  L     W++ E+  F+ + E  +        ++  M  + V  C G P
Sbjct: 184 ADPKSFGFKTRILTPEESWKLCEKIVFHRRDETGTLSEVRVDEDMEAMGKEMVTCCGGLP 243

Query: 367 LAARAVGSVLSNKTTPKEWNT--------LLSKSVIFDDDSGILPILKLSYDDLPSQMKL 418
           LA + +G +L+ K T  EW          L  +S + D+ + I  +L LSY++LP  +K 
Sbjct: 244 LAVKVLGGLLATKHTVPEWKRVYDNIGPHLAGRSSLDDNLNSIYRVLSLSYENLPMCLKH 303

Query: 419 CFAFCAIFPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSFFQDVDE 477
           CF + A FP+ YEI V+ L     A   I  S++G  ++  G     ELARR+    +D+
Sbjct: 304 CFLYLAHFPEYYEIHVKRLFNYLAAEGIITSSDDGTTIQDKGEDYLEELARRNMIT-IDK 362

Query: 478 TSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE-------CVTVMGRPNSIQLLKDS 530
             +F           +K C++HD+M ++ L   +EE         T     N+  L K  
Sbjct: 363 NYMFLR---------KKHCQMHDMMREVCLSKAKEENFLEIFKVSTATSAINARSLSK-- 411

Query: 531 SRHLFSSYHRMNTL--LDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNS--------LRA 580
           SR L  S H  N L  L   I K++   R++++F   D F   +L+  +        LR 
Sbjct: 412 SRRL--SVHGGNALPSLGQTINKKV---RSLLYFAFEDEFC--ILESTTPCFRSLPLLRV 464

Query: 581 LCIP--NFRGRPCLIQAKHLHHLRYLNLSHSWNMERLP 616
           L +    F G         L HLR+L+L  +W +  LP
Sbjct: 465 LDLSRVKFEGGKLPSSIGDLIHLRFLSLHRAW-ISHLP 501
>AT1G59620.1 | chr1:21902627-21905527 FORWARD LENGTH=843
          Length = 842

 Score =  137 bits (344), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 229/532 (43%), Gaps = 91/532 (17%)

Query: 13  LVSMVKEKASSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQGVKAWLEA 72
           L+S   EK    L+ +    +G+++Q   L+  L  +   + DA+ +      V   ++ 
Sbjct: 5   LLSFGVEKLWDLLVRESDRFQGVKKQFNELRSDLNKLRCFLEDADAKKHQSAMVSNTVKE 64

Query: 73  LKKVAYEANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLF----PTHNRIMFRYTMGKK 128
           +K++ Y+  DI + F    LR+  K+ G  RG+    +K F    P   +I     M   
Sbjct: 65  VKEIVYDTEDIIETF----LRK--KQLGRTRGMK-KRIKEFACVLPDRRKIAI--DMEGL 115

Query: 129 LRRIVQIIEVLVAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVR 188
            +RI ++I     +M + G              Q +++                 +K+V 
Sbjct: 116 SKRIAKVI----CDMQSLGV-------------QQENV-----------------KKLVG 141

Query: 189 SLLENNDI-MVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKI 247
            L+E  D   V+ I GMGG+GKTT A+ ++N   +K HF    WVCVS +F    +   I
Sbjct: 142 HLVEVEDSSQVVSITGMGGIGKTTLARQVFNHETVKSHFAQLAWVCVSQQFTRKYVWQTI 201

Query: 248 SMTTN------EKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGS 301
                      E   D + +KL + +  ++ L+VLDD+W    + W  ++     G    
Sbjct: 202 LRKVGPEYIKLEMTEDELQEKLFRLLGTRKALIVLDDIWRE--EDWDMIEPIFPLGKGWK 259

Query: 302 VILTTTR--LAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAF-------YLKKEKPSELV 352
           V+LT+    +A  A   G +   +  T +    W I  R  F       Y   EK  EL 
Sbjct: 260 VLLTSRNEGVALRANPNGFIFKPDCLTPEES--WTIFRRIVFPGENTTEYKVDEKMEEL- 316

Query: 353 DMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLS--KSVI-----FDDD--SGILP 403
               + +  C G PLA + +G +L    T  EW  +    KS I     F+D   S +  
Sbjct: 317 --GKQMIKHCGGLPLALKVLGGLLVVHFTLDEWKRIYGNIKSHIVGGTSFNDKNMSSVYH 374

Query: 404 ILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSE--NGVGLEKVGNR 461
           IL LS+++LP  +K CF + A FP+D+ ID+E L   W A         +G  + KVG+ 
Sbjct: 375 ILHLSFEELPIYLKHCFLYLAQFPEDFTIDLEKLSYYWAAEGMPRPRYYDGATIRKVGDG 434

Query: 462 IFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREE 513
              EL +R+            +  RD   +  +TC +HD++ ++ L    EE
Sbjct: 435 YIEELVKRNMV----------ISERDARTRRFETCHLHDIVREVCLLKAEEE 476
>AT5G63020.1 | chr5:25283252-25286002 REVERSE LENGTH=889
          Length = 888

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 232/531 (43%), Gaps = 86/531 (16%)

Query: 123 YTMGKKLRRIVQIIEVLVAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETE 182
           Y  GK++ ++++ +EVL  + + F    +R   A  + R T  ++          + +  
Sbjct: 113 YRYGKRVMKMIEEVEVLRYQGD-FAVVAERVDAARVEERPTRPMV----------AMDPM 161

Query: 183 KQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLS 241
            +     L+E+ +I +L + GMGG+GKTT    I N   ++   F +  W+ VS E  + 
Sbjct: 162 LESAWNRLMED-EIGILGLHGMGGVGKTTLLSHINNRFSRVGGEFDIVIWIVVSKELQIQ 220

Query: 242 KIASKI-----------SMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKL 290
           +I  +I              T +    N+   L+     KRF+L+LDD+W++ VD  +++
Sbjct: 221 RIQDEIWEKLRSDNEKWKQKTEDIKASNIYNVLKH----KRFVLLLDDIWSK-VD-LTEV 274

Query: 291 KTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSE 350
                    G  I+ TTRL E+   MG      +  L     W++  ++   +      E
Sbjct: 275 GVPFPSRENGCKIVFTTRLKEICGRMGVDSDMEVRCLAPDDAWDLFTKKVGEITLGSHPE 334

Query: 351 LVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPIL 405
           +  +      +C G PLA   +G  ++ K T +EW    + L S +  F   +  ILPIL
Sbjct: 335 IPTVARTVAKKCRGLPLALNVIGETMAYKRTVQEWRSAIDVLTSSAAEFSGMEDEILPIL 394

Query: 406 KLSYDDLPS-QMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFN 464
           K SYD+L S Q+KLCF +CA+FP+D+ I+   LV  W+   FI    G   E  G  I  
Sbjct: 395 KYSYDNLKSEQLKLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKGKA-ENQGYEIIG 453

Query: 465 ELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSI 524
            L R     + ++                +T K+HD++ ++AL++  +       + N I
Sbjct: 454 ILVRSCLLMEENQ----------------ETVKMHDVVREMALWIASD---FGKQKENFI 494

Query: 525 QLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGF------PQ---HLLKY 575
                 SR++              IEK  +  R  + F +++        PQ    LL+ 
Sbjct: 495 VQAGLQSRNIPE------------IEKWKVARRVSLMFNNIESIRDAPESPQLITLLLRK 542

Query: 576 NSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
           N L  +    FR  P L+          L+LS + ++  LP EIS   +LQ
Sbjct: 543 NFLGHISSSFFRLMPMLV---------VLDLSMNRDLRHLPNEISECVSLQ 584
>AT4G27220.1 | chr4:13633953-13636712 REVERSE LENGTH=920
          Length = 919

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 215/497 (43%), Gaps = 52/497 (10%)

Query: 195 DIMVLPIVGMGGLGKTTFAKLIYNE---PQIKEHFQLNRWVCVSDEFDLSKIASKISMTT 251
           ++  + + GMGG+GKTT  + + N+       + F L  WV VS +FDL ++   I+   
Sbjct: 133 NVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRL 192

Query: 252 NEKDCDNVLQKL-----QQEVSGKRFLLVLDDVWNR-DVDKWSKLKTCLQQGAAGSVILT 305
            ++     + +L     ++ +  K FLL+LDDVW+  D+D+   +   L++     V+LT
Sbjct: 193 GKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLG-IPLALERSKDSKVVLT 251

Query: 306 TTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVD-RCVG 364
           + RL EV Q M T +   +  L  +  WE+       + +   S+ V  + K V   C G
Sbjct: 252 SRRL-EVCQQMMTNENIKVACLQEKEAWELF---CHNVGEVANSDNVKPIAKDVSHECCG 307

Query: 365 SPLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCF 420
            PLA   +G  L  K   + W    N L   +   D +  I   LKLSYD L   MK CF
Sbjct: 308 LPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCF 367

Query: 421 AFCAIFPKDYEIDVEMLVKLWMANDFIPSENGV-GLEKVGNRIFNELARRSFFQDVDETS 479
            FCA+FP+DY I V  L+  W+A   +  ++    +   G  +   L      +D D   
Sbjct: 368 LFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCD 427

Query: 480 LFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREEC----VTVMGRPNSIQLLKDSSRHLF 535
                          T K+HD++ D A++ M  +       VM     I+  +D      
Sbjct: 428 ---------------TVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQD---KFV 469

Query: 536 SSYHRMNTL---LDAFIEKRILPLRTVMFF----GHLDGFPQHLLK-YNSLRALCIPNFR 587
           SS  R++ +   L+      I  + T++       H+   P   L+ + +LR L +   R
Sbjct: 470 SSVQRVSLMANKLERLPNNVIEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVR 529

Query: 588 GRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMT 647
            R       +LH LR L L +   +  LP  +  L  LQ             P+ ++ ++
Sbjct: 530 IRTLPDSFSNLHSLRSLVLRNCKKLRNLP-SLESLVKLQ-FLDLHESAIRELPRGLEALS 587

Query: 648 SLRHLYTQGCTDLECMP 664
           SLR++       L+ +P
Sbjct: 588 SLRYICVSNTYQLQSIP 604
>AT1G12290.1 | chr1:4178593-4181247 REVERSE LENGTH=885
          Length = 884

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 152/618 (24%), Positives = 263/618 (42%), Gaps = 84/618 (13%)

Query: 32  MEGMEEQHEILKRKLPAILDVISDAEEQASHR-QGVKAWLEALKKVAYEANDIFDEFKYE 90
           +  +EE  E LK     +L  +  AEE    R   +K WL+ +K +  + ND+ D  +  
Sbjct: 36  LTSLEEAMEDLKALRDDLLRKVQTAEEGGLQRLHQIKVWLKRVKTIESQFNDL-DSSRTV 94

Query: 91  ALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIVQIIEVLVAEMNAFGFKY 150
            L+R         G+G   ++L          Y  G+++  ++ I+E L ++   F    
Sbjct: 95  ELQRLC-----CCGVGSRNLRL---------SYDYGRRVFLMLNIVEDLKSK-GIFEEVA 139

Query: 151 QRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVRSLLENNDIMVLPIVGMGGLGKT 210
              + A  + R     I   ++ I+E++ +          L ++   ++ + GMGG+GKT
Sbjct: 140 HPATRAVGEERPLQPTI-VGQETILEKAWDH---------LMDDGTKIMGLYGMGGVGKT 189

Query: 211 TFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKIS-------MTTNEKDCDNVLQK 262
           T    I N      +  ++  WV VS +  + KI  +I        +  N+K  +     
Sbjct: 190 TLLTQINNRFCDTDDGVEIVIWVVVSGDLQIHKIQKEIGEKIGFIGVEWNQKSENQKAVD 249

Query: 263 LQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIMGTVQAH 322
           +   +S KRF+L+LDD+W R   + +++         G  I  TTR   V   MG     
Sbjct: 250 ILNFLSKKRFVLLLDDIWKRV--ELTEIGIPNPTSENGCKIAFTTRCQSVCASMGVHDPM 307

Query: 323 NLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTP 382
            +  L     W++ +++   +      ++ ++  K    C G PLA   +G  ++ K T 
Sbjct: 308 EVRCLGADDAWDLFKKKVGDITLSSHPDIPEIARKVAQACCGLPLALNVIGETMACKKTT 367

Query: 383 KEWNTLLSKSVIFDDDSG-----ILPILKLSYDDLPSQ-MKLCFAFCAIFPKDYEIDVEM 436
           +EW+  +  S  +  + G     ILPILK SYD+L S+ +K CF +C++FP+D  I+ E 
Sbjct: 368 QEWDRAVDVSTTYAANFGAVKERILPILKYSYDNLESESVKTCFLYCSLFPEDDLIEKER 427

Query: 437 LVKLWMANDFIPS-ENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKT 495
           L+  W+   FI   EN  G    G  I   L   S      E   F           +  
Sbjct: 428 LIDYWICEGFIDGDENKKGAVGEGYEILGTLVCASLLV---EGGKFNN---------KSY 475

Query: 496 CKIHDLMHDIALYVM------REECVTVMG-RPNSIQLLKDSSRHLFSSYHRMNTLLDAF 548
            K+HD++ ++AL++       ++ C+   G R N I  +KD    + S    +N  +   
Sbjct: 476 VKMHDVVREMALWIASDLRKHKDNCIVRAGFRLNEIPKVKDWK--VVSRMSLVNNRIKEI 533

Query: 549 IEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSH 608
                 P  T +F        +HL+  +         FR  P L+          L+LS 
Sbjct: 534 HGSPECPKLTTLFLQD----NRHLVNISG------EFFRSMPRLV---------VLDLSW 574

Query: 609 SWNMERLPEEISILYNLQ 626
           + N+  LP++IS L +L+
Sbjct: 575 NVNLSGLPDQISELVSLR 592
>AT5G43730.1 | chr5:17560267-17562813 FORWARD LENGTH=849
          Length = 848

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 165/683 (24%), Positives = 285/683 (41%), Gaps = 96/683 (14%)

Query: 22  SSYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQG-VKAWLEALKKVAYEA 80
           S+Y+      ++ +++  E LK     +L  +S  E++   R   V  WL  ++ V  E 
Sbjct: 25  SNYIHLMESNLDALQKTMEELKNGRDDLLARVSIEEDKGLQRLALVNGWLSRVQIVESEF 84

Query: 81  NDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIVQIIEVLV 140
            D+      EA+  E  +   +     D +            Y  G K+ + ++ ++ L+
Sbjct: 85  KDLL-----EAMSIETGRLCLFGYCSEDCIS----------SYNYGGKVMKNLEEVKELL 129

Query: 141 AEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQ-KIVRSLLENNDIMVL 199
           ++ N   F+   Q            II  +EK  ++ +   +    I    L +++I  L
Sbjct: 130 SKKN---FEVVAQK-----------IIPKAEKKHIQTTVGLDTMVGIAWESLIDDEIRTL 175

Query: 200 PIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKI----------S 248
            + GMGG+GKTT  + + N+  +++  F +  WV VS +F L  I  +I           
Sbjct: 176 GLYGMGGIGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQLEGIQDQILGRLRPDKEWE 235

Query: 249 MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTR 308
             T  K    +   L++    K+F+L+LDD+W+ +VD   K+         GS I+ TTR
Sbjct: 236 RETESKKASLINNNLKR----KKFVLLLDDLWS-EVD-LIKIGVPPPSRENGSKIVFTTR 289

Query: 309 LAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLA 368
             EV + M   +   +  L     WE+       +      ++  +      +C G PLA
Sbjct: 290 SKEVCKHMKADKQIKVDCLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLA 349

Query: 369 ARAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPILKLSYDDLPS-QMKLCFAF 422
              +G  +  K T +EW    N L S    F   +  ILPILK SYD L + ++KLCF +
Sbjct: 350 LNVIGKAMVCKETVQEWRHAINVLNSPGHKFPGMEERILPILKFSYDSLKNGEIKLCFLY 409

Query: 423 CAIFPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSFFQDVDETSLF 481
           C++FP+D+EI+ + L++ W+   +I P+    G    G  I   L R     +       
Sbjct: 410 CSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHLLIE------- 462

Query: 482 KMYRRDKLCQFRKTCKIHDLMHDIALYV-----MREECVTVMGRPNSIQLLKDSSRHLFS 536
                   C+     K+HD++ ++AL++      ++E + V    +   +  D S  +  
Sbjct: 463 --------CELTDKVKMHDVIREMALWINSDFGNQQETICVKSGAHVRLIPNDISWEIV- 513

Query: 537 SYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPNFRGRPCLIQAK 596
              R  +L+   +EK       +    +       LL YN L  + +  F   P L+   
Sbjct: 514 ---RQMSLISTQVEK-------IACSPNCPNLSTLLLPYNKLVDISVGFFLFMPKLV--- 560

Query: 597 HLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQG 656
                  L+LS +W++  LPEEIS L +LQ             P  +K +  L +L  + 
Sbjct: 561 ------VLDLSTNWSLIELPEEISNLGSLQ-YLNLSLTGIKSLPVGLKKLRKLIYLNLEF 613

Query: 657 CTDLECMPPELRKVTALQTLTYF 679
              LE +      +  LQ L  F
Sbjct: 614 TNVLESLVGIATTLPNLQVLKLF 636
>AT1G12210.1 | chr1:4140948-4143605 FORWARD LENGTH=886
          Length = 885

 Score =  128 bits (321), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 209/461 (45%), Gaps = 55/461 (11%)

Query: 185 KIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKI 243
           K+   L+E+  + ++ + GMGG+GKTT    I N+  ++   F +  WV VS    + KI
Sbjct: 166 KVWNCLMEDK-VWIVGLYGMGGVGKTTLLTQINNKFSKLGGGFDVVIWVVVSKNATVHKI 224

Query: 244 ASKIS-------MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQ 296
              I           +EK+ +     +   +  K+F+L+LDD+W +   K   +      
Sbjct: 225 QKSIGEKLGLVGKNWDEKNKNQRALDIHNVLRRKKFVLLLDDIWEKVELK--VIGVPYPS 282

Query: 297 GAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVD 356
           G  G  +  TT   EV   MG      ++ LD    W++++++          ++  +  
Sbjct: 283 GENGCKVAFTTHSKEVCGRMGVDNPMEISCLDTGNAWDLLKKKVGENTLGSHPDIPQLAR 342

Query: 357 KFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSG----ILPILKLSYDDL 412
           K  ++C G PLA   +G  +S K T +EW           D SG    ILPILK SYD L
Sbjct: 343 KVSEKCCGLPLALNVIGETMSFKRTIQEWRHATEVLTSATDFSGMEDEILPILKYSYDSL 402

Query: 413 PSQ-MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSF 471
             +  K CF +C++FP+D+EI  EML++ W+   FI  +   G EK  N+ ++ L     
Sbjct: 403 NGEDAKSCFLYCSLFPEDFEIRKEMLIEYWICEGFIKEKQ--GREKAFNQGYDILG---- 456

Query: 472 FQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVM------REECVTVMGRPNSIQ 525
              +  +SL     +DK         +HD++ ++AL++       +E C+   G    I 
Sbjct: 457 --TLVRSSLLLEGAKDK-----DVVSMHDMVREMALWIFSDLGKHKERCIVQAG----IG 505

Query: 526 LLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPN 585
           L +      + +  RM+ + + F  ++IL     +    L  F Q+  K   L  + +  
Sbjct: 506 LDELPEVENWRAVKRMSLMNNNF--EKILGSPECVELITL--FLQNNYK---LVDISMEF 558

Query: 586 FRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
           FR  P          L  L+LS + ++  LPEEIS L +LQ
Sbjct: 559 FRCMP---------SLAVLDLSENHSLSELPEEISELVSLQ 590
>AT4G10780.1 | chr4:6634779-6637457 REVERSE LENGTH=893
          Length = 892

 Score =  126 bits (316), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 202/472 (42%), Gaps = 59/472 (12%)

Query: 178 SRETEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQ-IKEHFQLNRWVCVSD 236
            RET  Q+    L+++  +  + + GMGG+GKTT    I+N     K    +  WV VS 
Sbjct: 156 GRETIFQRAWNRLMDDG-VGTMGLYGMGGVGKTTLLTQIHNTLHDTKNGVDIVIWVVVSS 214

Query: 237 EFDLSKIASKISMTT-------NEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSK 289
           +  + KI   I           N+K        +   +S KRF+L+LDD+W + VD  +K
Sbjct: 215 DLQIHKIQEDIGEKLGFIGKEWNKKQESQKAVDILNCLSKKRFVLLLDDIWKK-VD-LTK 272

Query: 290 LKTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPS 349
           +    Q       ++ TTR  +V   MG      +  L     WE+ + +   +      
Sbjct: 273 IGIPSQTRENKCKVVFTTRSLDVCARMGVHDPMEVQCLSTNDAWELFQEKVGQISLGSHP 332

Query: 350 ELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPI 404
           +++++  K   +C G PLA   +G  ++ K   +EW    + L S +  F   D  IL I
Sbjct: 333 DILELAKKVAGKCRGLPLALNVIGETMAGKRAVQEWHHAVDVLTSYAAEFSGMDDHILLI 392

Query: 405 LKLSYDDLPSQ-MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKV---GN 460
           LK SYD+L  + ++ CF +CA++P+DY I    L+  W+   FI  +  +G E+    G 
Sbjct: 393 LKYSYDNLNDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFI--DGNIGKERAVNQGY 450

Query: 461 RIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVM------REEC 514
            I   L R     +  +  L                K+HD++ ++AL+ +      +E C
Sbjct: 451 EILGTLVRACLLSEEGKNKL--------------EVKMHDVVREMALWTLSDLGKNKERC 496

Query: 515 VTVMGRPNSIQLLKDSSRHLFSSYHR---MNTLLDAFIEKRILPLRTVMFFG------HL 565
           +   G      L K      + +  R   MN  ++        P  T +F        H+
Sbjct: 497 IVQAGSG----LRKVPKVEDWGAVRRLSLMNNGIEEISGSPECPELTTLFLQENKSLVHI 552

Query: 566 DG-FPQHLLKYNSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLP 616
            G F +H+ K   L         G P   Q   L  LRYL+LSH+ N+E LP
Sbjct: 553 SGEFFRHMRKLVVLDLSENHQLDGLP--EQISELVALRYLDLSHT-NIEGLP 601
>AT5G43740.1 | chr5:17566010-17568598 FORWARD LENGTH=863
          Length = 862

 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 218/499 (43%), Gaps = 72/499 (14%)

Query: 32  MEGMEEQHEILKRKLPAILDVISDAEEQASHRQG-VKAWLEALKKVAYEANDIFDEFKYE 90
           ++ +++  E LK     +L  +S  E++   R   V  WL  ++ V  E  D+ +    E
Sbjct: 34  LDALQKTMEELKNGRDDLLGRVSIEEDKGLQRLAQVNGWLSRVQIVESEFKDLLEAMSIE 93

Query: 91  ALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIVQIIEVLVAEMNAFGFKY 150
                    G    LG  +     ++N        G+K+ ++++ +              
Sbjct: 94  T--------GRLCLLGYCSEDCISSYN-------YGEKVSKMLEEV-------------- 124

Query: 151 QRQSLASKQWRQ-TDSIIDYSEKDIVERSRETEK-QKIVRSLLENNDIMVLPIVGMGGLG 208
            ++ L+ K +R     II   EK +++ +   +K  ++  S L N++I  L + GMGG+G
Sbjct: 125 -KELLSKKDFRMVAQEIIHKVEKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVG 183

Query: 209 KTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKI----------SMTTNEKDCD 257
           KTT  + + N+  +++  F +  WV VS +F    I  +I             T  K   
Sbjct: 184 KTTLLESLNNKFVELESEFDVVIWVVVSKDFQFEGIQDQILGRLRSDKEWERETESKKAS 243

Query: 258 NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIMG 317
            +   L++    K+F+L+LDD+W+ +VD  +K+         GS I+ TTR  EV + M 
Sbjct: 244 LIYNNLER----KKFVLLLDDLWS-EVDM-TKIGVPPPTRENGSKIVFTTRSTEVCKHMK 297

Query: 318 TVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLS 377
             +   +  L     WE+       +      ++  +      +C G PLA   +G  +S
Sbjct: 298 ADKQIKVACLSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMS 357

Query: 378 NKTTPKEW----NTLLSKSVIFDD-DSGILPILKLSYDDLPS-QMKLCFAFCAIFPKDYE 431
            K T +EW    N L S    F   +  ILPILK SYD L + ++KLCF +C++FP+D E
Sbjct: 358 CKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSE 417

Query: 432 IDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLC 490
           I  E  ++ W+   FI P+    G    G  I   L R     +               C
Sbjct: 418 IPKEKWIEYWICEGFINPNRYEDGGTNHGYDIIGLLVRAHLLIE---------------C 462

Query: 491 QFRKTCKIHDLMHDIALYV 509
           +     K+HD++ ++AL++
Sbjct: 463 ELTDNVKMHDVIREMALWI 481
>AT1G61180.2 | chr1:22551486-22554185 FORWARD LENGTH=900
          Length = 899

 Score =  123 bits (309), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 232/527 (44%), Gaps = 76/527 (14%)

Query: 123 YTMGKKLRRIVQIIEVLVAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETE 182
           Y  GKK+  +++ ++ L +E N F    Q    +  + R T   I   ++D++E++    
Sbjct: 111 YKYGKKVFLLLEEVKKLNSEGN-FDEVSQPPPRSEVEERPTQPTI--GQEDMLEKAWNR- 166

Query: 183 KQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLS 241
                   L  + + ++ + GMGG+GKTT  K I+N+  +I   F +  W+ VS    +S
Sbjct: 167 --------LMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSKGVMIS 218

Query: 242 KIASKIS--------MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTC 293
           K+   I+        +  N+ + D     + + + GKRF+L+LDD+W + VD    +   
Sbjct: 219 KLQEDIAEKLHLCDDLWKNKNESDKA-TDIHRVLKGKRFVLMLDDIWEK-VD-LEAIGIP 275

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVD 353
                    +  TTR  EV   MG  +   +  L+    WE+ + +           +V+
Sbjct: 276 YPSEVNKCKVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVE 335

Query: 354 MVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLL-----SKSVIFDDDSGILPILKLS 408
           +  +   +C G PLA   +G  +S+KT  +EW   +     S +   D  + ILPILK S
Sbjct: 336 LAREVAQKCRGLPLALNVIGETMSSKTMVQEWEHAIHVFNTSAAEFSDMQNKILPILKYS 395

Query: 409 YDDLPSQ-MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEK-VGNRIFNEL 466
           YD L  + +K CF +CA+FP+D EI  E L+  W+   FI  +  +   +  G  +   L
Sbjct: 396 YDSLGDEHIKSCFLYCALFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKGYAMLGTL 455

Query: 467 ARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYV------MREECVTVMGR 520
            R +    V                    C +HD++ ++AL++       +E  V   G 
Sbjct: 456 TRANLLTKVGTY----------------YCVMHDVVREMALWIASDFGKQKENFVVQAGV 499

Query: 521 P-NSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLR 579
             + I  +KD     + +  +M +L+D  IE+       +             L+ N L+
Sbjct: 500 GLHEIPKVKD-----WGAVRKM-SLMDNDIEE-------ITCESKCSELTTLFLQSNKLK 546

Query: 580 ALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
            L     R         ++  L  L+LS++ +  +LPE+IS L +LQ
Sbjct: 547 NLPGAFIR---------YMQKLVVLDLSYNRDFNKLPEQISGLVSLQ 584
>AT1G12220.1 | chr1:4145011-4147680 FORWARD LENGTH=890
          Length = 889

 Score =  122 bits (307), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 194/450 (43%), Gaps = 58/450 (12%)

Query: 198 VLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKIS-------M 249
           +L + GMGG+GKTT    I N+  +I + F +  WV VS    + KI   I+       M
Sbjct: 178 ILGLYGMGGVGKTTLLTKINNKFSKIDDRFDVVIWVVVSRSSTVRKIQRDIAEKVGLGGM 237

Query: 250 TTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRL 309
             +EK+ + +   +   +  ++F+L+LDD+W +   K   +         G  +  TTR 
Sbjct: 238 EWSEKNDNQIAVDIHNVLRRRKFVLLLDDIWEKVNLK--AVGVPYPSKDNGCKVAFTTRS 295

Query: 310 AEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAA 369
            +V   MG      ++ L     W++ + +          ++  +  K   +C G PLA 
Sbjct: 296 RDVCGRMGVDDPMEVSCLQPEESWDLFQMKVGKNTLGSHPDIPGLARKVARKCRGLPLAL 355

Query: 370 RAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPILKLSYDDLPSQ-MKLCFAFC 423
             +G  ++ K T  EW    + L S ++ F   +  IL +LK SYD+L  + MK CF +C
Sbjct: 356 NVIGEAMACKRTVHEWCHAIDVLTSSAIDFSGMEDEILHVLKYSYDNLNGELMKSCFLYC 415

Query: 424 AIFPKDYEIDVEMLVKLWMANDFIPSENGVGLE-KVGNRIFNELARRSFFQDVDETSLFK 482
           ++FP+DY ID E LV  W++  FI  + G       G  I   L R     + +      
Sbjct: 416 SLFPEDYLIDKEGLVDYWISEGFINEKEGRERNINQGYEIIGTLVRACLLLEEERN---- 471

Query: 483 MYRRDKLCQFRKTCKIHDLMHDIALYV------MREECVTVMGRPNSIQLLKDSSRHLFS 536
                     +   K+HD++ ++AL++       +E+C+   G     ++ K    +   
Sbjct: 472 ----------KSNVKMHDVVREMALWISSDLGKQKEKCIVRAG-VGLREVPKVKDWNTVR 520

Query: 537 SYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPNFRGRPCLIQAK 596
               MN  ++   +       T +F           L+ N +  +    FR  P      
Sbjct: 521 KISLMNNEIEEIFDSHECAALTTLF-----------LQKNDVVKISAEFFRCMP------ 563

Query: 597 HLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
              HL  L+LS + ++  LPEEIS L +L+
Sbjct: 564 ---HLVVLDLSENQSLNELPEEISELASLR 590
>AT5G47250.1 | chr5:19186045-19188576 REVERSE LENGTH=844
          Length = 843

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 233/534 (43%), Gaps = 76/534 (14%)

Query: 180 ETEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEF 238
           +T  +K   SL ++ + M L I GMGG+GKTT   LI N+  ++ + + +  WV  S + 
Sbjct: 161 DTTLEKTWESLRKDENRM-LGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVIWVESSKDA 219

Query: 239 DLSKIASKISMTTNEKDCDNVLQ-----KLQQEVS------GKRFLLVLDDVWNRDVDKW 287
           D+ KI   I    +   CDN        K   E+S        RF+L+LDD+W  DV   
Sbjct: 220 DVGKIQDAIGERLH--ICDNNWSTYSRGKKASEISRVLRDMKPRFVLLLDDLW-EDV--- 273

Query: 288 SKLKTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEK 347
           S     +        ++ TTR  +V  +M   +   +  L     W++ + +      + 
Sbjct: 274 SLTAIGIPVLGKKYKVVFTTRSKDVCSVMRANEDIEVQCLSENDAWDLFDMKVHC---DG 330

Query: 348 PSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLS-----KSVIFDDDSGIL 402
            +E+ D+  K V +C G PLA   +   +++K+T  +W   L      +S +   + GI 
Sbjct: 331 LNEISDIAKKIVAKCCGLPLALEVIRKTMASKSTVIQWRRALDTLESYRSEMKGTEKGIF 390

Query: 403 PILKLSYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRI 462
            +LKLSYD L ++   CF +CA+FPK Y I  + LV+ W+   FI  ++G          
Sbjct: 391 QVLKLSYDYLKTKNAKCFLYCALFPKAYYIKQDELVEYWIGEGFIDEKDG---------- 440

Query: 463 FNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPN 522
             E A+   ++ +D      +     L +  K   +HD++ D+AL+++ E          
Sbjct: 441 -RERAKDRGYEIID-----NLVGAGLLLESNKKVYMHDMIRDMALWIVSE---------- 484

Query: 523 SIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQ--HLLKYNSLRA 580
                +D  R++  +   ++ L D  +       +  +F   +   P         +L  
Sbjct: 485 ----FRDGERYVVKTDAGLSQLPD--VTDWTTVTKMSLFNNEIKNIPDDPEFPDQTNLVT 538

Query: 581 LCIPNFR-----GRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXX 635
           L + N R     G+  L+    +  L  L+LS ++ +  LP+ IS L +L+         
Sbjct: 539 LFLQNNRLVDIVGKFFLV----MSTLVVLDLSWNFQITELPKGISALVSLR-LLNLSGTS 593

Query: 636 XXXXPKNMKYMTSLRHLYTQGCTDLECMP--PELRKVTALQTLTYFVVGNSSDC 687
               P+ +  ++ L HL  +  ++L  +    EL+K   LQ L ++    + DC
Sbjct: 594 IKHLPEGLGVLSKLIHLNLESTSNLRSVGLISELQK---LQVLRFYGSAAALDC 644
>AT1G61190.1 | chr1:22557602-22560687 FORWARD LENGTH=968
          Length = 967

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 206/462 (44%), Gaps = 67/462 (14%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKIS- 248
           L  + + ++ + GMGG+GKTT  K I+N+  +    F +  W+ VS    LSK+   I+ 
Sbjct: 168 LMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAE 227

Query: 249 -------MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGS 301
                  +  N+ + D     + + + GKRF+L+LDD+W + VD    +           
Sbjct: 228 KLHLCDDLWKNKNESDKA-TDIHRVLKGKRFVLMLDDIWEK-VD-LEAIGIPYPSEVNKC 284

Query: 302 VILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDR 361
            +  TTR  +V   MG  +   +  L+    WE+ + +           +V +  +   +
Sbjct: 285 KVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQK 344

Query: 362 CVGSPLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPILKLSYDDLPSQ- 415
           C G PLA   +G  +++KT  +EW    + L   +  F D  + ILPILK SYD L  + 
Sbjct: 345 CRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEH 404

Query: 416 MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDV 475
           +K CF +CA+FP+D +ID + L+  W+   FI      G ++V  R     AR   ++  
Sbjct: 405 IKSCFLYCALFPEDDKIDTKTLINKWICEGFI------GEDQVIKR-----ARNKGYE-- 451

Query: 476 DETSLFKMYRRDKLCQFRKTCKIHDLMHDI----ALYVM-----REECVTVMGRP--NSI 524
               L  + R + L   R   K H +MHD+    AL++      ++E   V  R   + I
Sbjct: 452 ---MLGTLIRANLLTNDRGFVKWHVVMHDVVREMALWIASDFGKQKENYVVRARVGLHEI 508

Query: 525 QLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIP 584
             +KD     + +  RM+ +++   E        +             L+ N L+ L   
Sbjct: 509 PKVKD-----WGAVRRMSLMMNEIEE--------ITCESKCSELTTLFLQSNQLKNLSGE 555

Query: 585 NFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
             R         ++  L  L+LSH+ +   LPE+IS L +LQ
Sbjct: 556 FIR---------YMQKLVVLDLSHNPDFNELPEQISGLVSLQ 588
>AT1G15890.1 | chr1:5461406-5463961 FORWARD LENGTH=852
          Length = 851

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 225/505 (44%), Gaps = 65/505 (12%)

Query: 23  SYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQG-VKAWLEALKKVAYEAN 81
           +Y+L+    +E ++   + L+ +   +L  +   E++   R   V+ WL  +K V  + N
Sbjct: 27  NYILKMEANLEALQNTMQELEERRDDLLRRVVIEEDKGLQRLAQVQGWLSRVKDVCSQVN 86

Query: 82  DIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIVQIIEVLVA 141
           D+        L+ ++ +       G  +       N   +   + KKL+ +  ++   V 
Sbjct: 87  DL--------LKAKSIQTERLCLCGYCSKNFISGRN---YGINVLKKLKHVEGLLAKGVF 135

Query: 142 EMNAFGFKYQRQSLASKQWRQT---DSIIDYSEKDIVERSRETEKQKIVRSLLENNDIMV 198
           E+ A   K     +  K  + T   D+++  +   +++  R T                 
Sbjct: 136 EVVAE--KIPAPKVEKKHIQTTVGLDAMVGRAWNSLMKDERRT----------------- 176

Query: 199 LPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKI-SMTTNEKDC 256
           L + GMGG+GKTT    I N+  +    F L  WV VS +     I  +I       +  
Sbjct: 177 LGLYGMGGVGKTTLLASINNKFLEGMNGFDLVIWVVVSKDLQNEGIQEQILGRLGLHRGW 236

Query: 257 DNVLQKLQQE-----VSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAE 311
             V +K +       ++ K+F+L+LDD+W+ +VD   K+         GS I+ TTR  +
Sbjct: 237 KQVTEKEKASYICNILNVKKFVLLLDDLWS-EVD-LEKIGVPPLTRENGSKIVFTTRSKD 294

Query: 312 VAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARA 371
           V + M       +  L     WE+ +++   +  +   ++  +  K  ++C G PLA   
Sbjct: 295 VCRDMEVDGEMKVDCLPPDEAWELFQKKVGPIPLQSHEDIPTLARKVAEKCCGLPLALSV 354

Query: 372 VGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPILKLSYDDLPSQ-MKLCFAFCAI 425
           +G  ++++ T +EW    + L S S  F   +  ILP+LK SYDDL  + +KLCF +C++
Sbjct: 355 IGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCFLYCSL 414

Query: 426 FPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMY 484
           FP+DYE+  E L++ WM   FI  +E+  G    G+ I   L R     D + T+  KM 
Sbjct: 415 FPEDYEVRKEELIEYWMCEGFIDGNEDEDGANNKGHDIIGSLVRAHLLMDGELTTKVKM- 473

Query: 485 RRDKLCQFRKTCKIHDLMHDIALYV 509
                         HD++ ++AL++
Sbjct: 474 --------------HDVIREMALWI 484
>AT4G26090.1 | chr4:13224596-13227325 FORWARD LENGTH=910
          Length = 909

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 156/316 (49%), Gaps = 15/316 (4%)

Query: 181 TEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEH-FQLNRWVCVSDEFD 239
           T  ++++  L E  +  ++ + G GG+GKTT  + I NE   K H + +  WV +S EF 
Sbjct: 160 TMMEQVLEFLSEEEERGIIGVYGPGGVGKTTLMQSINNELITKGHQYDVLIWVQMSREFG 219

Query: 240 ----LSKIASKISMTTNEKDC-DNVLQKLQQEVSGKRFLLVLDDVWNR-DVDKWSKLKTC 293
                  + +++ ++ +EK+  +N   K+ + +  KRFLL+LDDVW   D++K    +  
Sbjct: 220 ECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEEIDLEKTGVPRPD 279

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVD 353
            +       ++ TTR   +   MG      +  L+ +  WE+   + +     + S +  
Sbjct: 280 RENKCK---VMFTTRSIALCNNMGAEYKLRVEFLEKKHAWELFCSKVWRKDLLESSSIRR 336

Query: 354 MVDKFVDRCVGSPLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDDDSGILPILKLSY 409
           + +  V +C G PLA   +G  ++++ T +EW      L          + +  +LK SY
Sbjct: 337 LAEIIVSKCGGLPLALITLGGAMAHRETEEEWIHASEVLTRFPAEMKGMNYVFALLKFSY 396

Query: 410 DDLPSQM-KLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELAR 468
           D+L S + + CF +CA+FP+++ I++E LV+ W+   F+ S +GV     G  +  +L  
Sbjct: 397 DNLESDLLRSCFLYCALFPEEHSIEIEQLVEYWVGEGFLTSSHGVNTIYKGYFLIGDLKA 456

Query: 469 RSFFQDVDETSLFKMY 484
               +  DE +  KM+
Sbjct: 457 ACLLETGDEKTQVKMH 472
>AT4G27190.1 | chr4:13620977-13623934 REVERSE LENGTH=986
          Length = 985

 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 42/343 (12%)

Query: 187 VRSLLENNDIMVLPIVGMGGLGKTTFAKLIYN---EPQIKEHFQLNRWVCVSDEFDLSKI 243
           +R  L +     + + GMGG+GKTT  + + N   E    + F L  +V VS EFD  ++
Sbjct: 155 IRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREV 214

Query: 244 ASKISMTTNEKDCDNVLQKLQQEVSGK---------RFLLVLDDVWNR-DVDKWSKLKTC 293
             +I+      D D  +++ +++++ +         +FLL+LDDVW   D+D     +T 
Sbjct: 215 QKQIA---ERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRT- 270

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVD 353
             +   GS ++ T+R  EV + M T     +  L     WE+  + A  + +   S+ V 
Sbjct: 271 --EENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVR---SDHVR 325

Query: 354 MVDKFVDR-CVGSPLAARAVGSVLSNKTTPKEWNTLLSK---SV--IFDDDSGILPILKL 407
            + K V + C G PLA   VG+ +  K   K WN +LSK   SV  I   +  I   LKL
Sbjct: 326 KIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKL 385

Query: 408 SYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELA 467
           SYD L  + K CF  CA+FP+DY I+V  +V+ WMA  F        +E++G++      
Sbjct: 386 SYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGF--------MEELGSQ------ 431

Query: 468 RRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVM 510
             S  + +      K Y   +    R T K+HD++ D A+++M
Sbjct: 432 EDSMNEGITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWIM 474
>AT1G61310.1 | chr1:22613166-22615943 REVERSE LENGTH=926
          Length = 925

 Score =  120 bits (300), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 234/530 (44%), Gaps = 71/530 (13%)

Query: 123 YTMGKKLRRIVQIIEVLVAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETE 182
           Y  GKK+  +++ +++L +E N F    Q    +  + R T   I           +E  
Sbjct: 113 YKYGKKVFLLLEEVKILKSEGN-FDEVSQPPPRSEVEERPTQPTI----------GQEEM 161

Query: 183 KQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLS 241
            +K    L+E+  + ++ + GMGG+GKTT  K I+N+  +I   F +  W+ VS    LS
Sbjct: 162 LEKAWNRLMEDG-VGIMGLHGMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSQGAKLS 220

Query: 242 KIASKIS--------MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNR-DVDKW----- 287
           K+   I+        +  N+ + D     + + + GKRF+L+LDD+W + D++       
Sbjct: 221 KLQEDIAEKLHLCDDLWKNKNESDKA-TDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYP 279

Query: 288 SKLKTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEK 347
           S++  C         +  TTR  EV   MG  +   +  L+    WE+ + +        
Sbjct: 280 SEVNKC--------KVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGDNTLSS 331

Query: 348 PSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGIL 402
              +V +  +   +C G PLA   +G  +++KT  +EW    + L   +  F   ++ IL
Sbjct: 332 DPVIVGLAREVAQKCRGLPLALNVIGETMASKTMVQEWEYAIDVLTRSAAEFSGMENKIL 391

Query: 403 PILKLSYDDLPSQ-MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEK-VGN 460
           PILK SYD L  + +K CF +CA+FP+D +I  E L+   +   FI  +  +   +  G 
Sbjct: 392 PILKYSYDSLGDEHIKSCFLYCALFPEDGQIYTETLIDKLICEGFIGEDQVIKRARNKGY 451

Query: 461 RIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGR 520
            +   L R +    V  T L  +  +  +      C +HD++ ++AL++  +      G+
Sbjct: 452 AMLGTLTRANLLTKVG-TELANLLTKVSIYH----CVMHDVVREMALWIASD-----FGK 501

Query: 521 PNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRT----VMFFGHLDGFPQHLLKYN 576
                +++ S     +  H +  + D    +R+  +R     +             L+ N
Sbjct: 502 QKENFVVQAS-----AGLHEIPEVKDWGAVRRMSLMRNEIEEITCESKCSELTTLFLQSN 556

Query: 577 SLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
            L+ L     R         ++  L  L+LS + +   LPE+IS L +LQ
Sbjct: 557 QLKNLSGEFIR---------YMQKLVVLDLSDNRDFNELPEQISGLVSLQ 597
>AT1G51480.1 | chr1:19090847-19094306 REVERSE LENGTH=942
          Length = 941

 Score =  119 bits (299), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 220/513 (42%), Gaps = 66/513 (12%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKISM 249
           L N++I  L + GMGG+GKTT    I N+  +++  F +  WV VS +F L  I  +I  
Sbjct: 255 LMNDEIRTLCLHGMGGVGKTTLLACINNKFVELESEFDVVIWVVVSKDFQLEGIQDQILG 314

Query: 250 TTN-----EKDCDNVLQKL-QQEVSGKRFLLVLDDVWNR-DVDKWSKLKTCLQQGAAGSV 302
                   E++ +N    L    +  K+F+L+LDD+W+  D++K        + GA    
Sbjct: 315 RLRLDKEWERETENKKASLINNNLKRKKFVLLLDDLWSEVDLNKIGVPPPTRENGAK--- 371

Query: 303 ILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRC 362
           I+ T R  EV++ M       ++ L     WE+       +      ++  +      +C
Sbjct: 372 IVFTKRSKEVSKYMKADMQIKVSCLSPDEAWELFRITVDDVILSSHEDIPALARIVAAKC 431

Query: 363 VGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSG---------ILPILKLSYDDLP 413
            G PLA   +G  ++ K T +EW+  ++   + +  +G         IL +LK SYD L 
Sbjct: 432 HGLPLALIVIGEAMACKETIQEWHHAIN---VLNSPAGHKFPGMEERILLVLKFSYDSLK 488

Query: 414 S-QMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFI-PSENGVGLEKVGNRIFNELARRSF 471
           + ++KLCF +C++FP+D+EI+ E L++ W+   +I P+    G    G  I   L R   
Sbjct: 489 NGEIKLCFLYCSLFPEDFEIEKEKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHL 548

Query: 472 FQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYV-----MREECVTVMGRPNSIQL 526
             +               C+     K+H ++ ++AL++      ++E + V    +   +
Sbjct: 549 LIE---------------CELTTKVKMHYVIREMALWINSDFGKQQETICVKSGAHVRMI 593

Query: 527 LKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPNF 586
             D +  +     R  +L+   IEK       +            LL YN L  + +  F
Sbjct: 594 PNDINWEIV----RQVSLISTQIEK-------ISCSSKCSNLSTLLLPYNKLVNISVGFF 642

Query: 587 RGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYM 646
              P L+          L+LS + ++  LPEEIS L +LQ             P  MK +
Sbjct: 643 LFMPKLV---------VLDLSTNMSLIELPEEISNLCSLQ-YLNLSSTGIKSLPGGMKKL 692

Query: 647 TSLRHLYTQGCTDLECMPPELRKVTALQTLTYF 679
             L +L  +    LE +      +  LQ L  F
Sbjct: 693 RKLIYLNLEFSYKLESLVGISATLPNLQVLKLF 725
>AT1G61300.1 | chr1:22607714-22610175 REVERSE LENGTH=763
          Length = 762

 Score =  119 bits (299), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 211/462 (45%), Gaps = 70/462 (15%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKIASKIS- 248
           L  + + ++ + GMGG+GKTT  K I+N+  ++   F +  W+ VS    LSK+   I+ 
Sbjct: 56  LMEDRVGIMGLHGMGGVGKTTLFKKIHNKFAKMSSRFDIVIWIVVSKGAKLSKLQEDIAE 115

Query: 249 -------MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNR------DVDKWSKLKTCLQ 295
                  +  N+ + D     + + + GKRF+L+LDD+W +       V   S++  C  
Sbjct: 116 KLHLCDDLWKNKNESDKA-TDIHRVLKGKRFVLMLDDIWEKVDLEAIGVPYPSEVNKC-- 172

Query: 296 QGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
                  +  TTR  +V   MG  +   +  L+    WE+ + +           +V++ 
Sbjct: 173 ------KVAFTTRDQKVCGEMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVELA 226

Query: 356 DKFVDRCVGSPLAARAVGSVLSNKTTPKEWN---TLLSKSVIFDDDSG--ILPILKLSYD 410
            +   +C G PLA   +G  +++KT  +EW     +L++S     + G  ILPILK SYD
Sbjct: 227 REVAQKCRGLPLALSVIGETMASKTMVQEWEHAIDVLTRSAAEFSNMGNKILPILKYSYD 286

Query: 411 DLPSQ-MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARR 469
            L  + +K CF +CA+FP+D EI  E L+  W+   FI      G ++V  R     AR 
Sbjct: 287 SLGDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEGFI------GEDQVIKR-----ARN 335

Query: 470 SFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVM-----REECVTVMGRPNSI 524
             ++ +   +L  +  +       +   +HD++ ++AL++      ++E   V  R   +
Sbjct: 336 KGYEMLGTLTLANLLTKVG----TEHVVMHDVVREMALWIASDFGKQKENFVVRAR---V 388

Query: 525 QLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIP 584
            L +      + +  RM +L+D  IE+       +             L+ N L+ L   
Sbjct: 389 GLHERPEAKDWGAVRRM-SLMDNHIEE-------ITCESKCSELTTLFLQSNQLKNLSGE 440

Query: 585 NFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
             R         ++  L  L+LS++ +  +LPE+IS L +LQ
Sbjct: 441 FIR---------YMQKLVVLDLSYNRDFNKLPEQISGLVSLQ 473
>AT1G12280.1 | chr1:4174875-4177559 REVERSE LENGTH=895
          Length = 894

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 158/639 (24%), Positives = 275/639 (43%), Gaps = 110/639 (17%)

Query: 23  SYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQ---GVKAWLEALKKVAYE 79
            Y+ E  K +  M++  E+LK+K   +   + D EE    R+    V+ WL  +  V  +
Sbjct: 27  GYICELSKNVVAMKKDMEVLKKKRDDVKRRV-DIEEFTRRRERLSQVQGWLTNVSTVENK 85

Query: 80  ANDIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIVQIIEVL 139
            N++      E  R                +  F + N +   Y  GK++  +++ IE L
Sbjct: 86  FNELLTTNDAELQRL--------------CLFGFCSKN-VKMSYLYGKRVVLMLKEIESL 130

Query: 140 VAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVRSLLENNDIMVL 199
            ++ +     +   +LA+   R  +  I   +  IV   +ET  +++   L E+ D +V 
Sbjct: 131 SSQGD-----FDTVTLATPIARIEEMPI---QPTIV--GQETMLERVWTRLTEDGDEIV- 179

Query: 200 PIVGMGGLGKTTFAKLIYNEPQIK-EHFQLNRWVCVSDEFDLSKIASKIS--MTTNEKDC 256
            + GMGG+GKTT    I N+   K   F +  WV VS   D+ +I   I   +    ++ 
Sbjct: 180 GLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSPDIHRIQGDIGKRLDLGGEEW 239

Query: 257 DNVLQKLQQ----EVSGK-RFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAE 311
           DNV +  +      V GK +F+L+LDD+W +       L         G  ++ TTR  +
Sbjct: 240 DNVNENQRALDIYNVLGKQKFVLLLDDIWEKV--NLEVLGVPYPSRQNGCKVVFTTRSRD 297

Query: 312 VAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARA 371
           V   M       ++ L+    WE+ + +      +   ++ ++  K   +C G PLA   
Sbjct: 298 VCGRMRVDDPMEVSCLEPNEAWELFQMKVGENTLKGHPDIPELARKVAGKCCGLPLALNV 357

Query: 372 VGSVLSNKTTPKEW----NTLLSKSVIFDDDSGILPILKLSYDDL-PSQMKLCFAFCAIF 426
           +G  ++ K   +EW    + L S +  F     ILPILK SYD+L   Q+K CF +C++F
Sbjct: 358 IGETMACKRMVQEWRNAIDVLSSYAAEFPGMEQILPILKYSYDNLNKEQVKPCFLYCSLF 417

Query: 427 PKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRR 486
           P+DY ++ E L+  W+   FI                NE   R+  Q  +   +      
Sbjct: 418 PEDYRMEKERLIDYWICEGFIDE--------------NESRERALSQGYEIIGILV---- 459

Query: 487 DKLCQF------RKTCKIHDLMHDIALYVM------REECVTVMGRPNSIQLLKDSSRHL 534
            + C        ++  K+HD++ ++AL++       +E C+  +G    + L +      
Sbjct: 460 -RACLLLEEAINKEQVKMHDVVREMALWIASDLGEHKERCIVQVG----VGLREVPKVKN 514

Query: 535 FSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQ-------HLLKYNSLRALCIPNFR 587
           +SS  RM +L++  IE              L G P+        L K +SL  +    FR
Sbjct: 515 WSSVRRM-SLMENEIE-------------ILSGSPECLELTTLFLQKNDSLLHISDEFFR 560

Query: 588 GRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
             P L+          L+LS + ++ +LP +IS L +L+
Sbjct: 561 CIPMLV---------VLDLSGNSSLRKLPNQISKLVSLR 590
>AT1G63350.1 | chr1:23494935-23497631 REVERSE LENGTH=899
          Length = 898

 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 152/665 (22%), Positives = 270/665 (40%), Gaps = 89/665 (13%)

Query: 23  SYLLEQYKVMEGMEEQHEILKRKLPAILDVISDAEEQASHRQG-VKAWLEALKKVAYEAN 81
           SY     K +  +E   E LK K   +L  +   E++     G +K WL  ++ +    N
Sbjct: 25  SYTHNLEKNLVALETTMEELKAKRDDLLRKLKREEDRGLQTLGEIKVWLNRVETIESRVN 84

Query: 82  DIFDEFKYEALRREAKKNGHYRGLGMDAVKLFPTHNRIMFRYTMGKKLRRIVQIIEVLVA 141
           D+ +            +N   + L +           +   Y  GK +   +++ EV   
Sbjct: 85  DLLN-----------ARNAELQRLCLCGF----CSKSLTTSYRYGKSV--FLKLREVEKL 127

Query: 142 EMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVRSLLENNDIMVLPI 201
           E   F     + S +  + +Q    I           +ET        L+E+  + ++ +
Sbjct: 128 ERRVFEVISDQASTSEVEEQQLQPTI---------VGQETMLDNAWNHLMEDG-VGIMGL 177

Query: 202 VGMGGLGKTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFD----LSKIASKISMTTNEKDC 256
            GMGG+GKTT    I N+  +    F    WV VS E +    L +IA K+ ++  + D 
Sbjct: 178 YGMGGVGKTTLLTQINNKFSKYMCGFDSVIWVVVSKEVNVENILDEIAQKVHISGEKWDT 237

Query: 257 DNVLQK---LQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVA 313
               QK   L   +   RF+L LDD+W +      ++            ++ TTR  +V 
Sbjct: 238 KYKYQKGVYLYNFLRKMRFVLFLDDIWEKV--NLVEIGVPFPTIKNKCKVVFTTRSLDVC 295

Query: 314 QIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVG 373
             MG  +   +  L +   +++ +++   +      E+ ++      +C G PLA   V 
Sbjct: 296 TSMGVEKPMEVQCLADNDAYDLFQKKVGQITLGSDPEIRELSRVVAKKCCGLPLALNVVS 355

Query: 374 SVLSNKTTPKEW-------NTLLSKSVIFDDDSGILPILKLSYDDLPSQ-MKLCFAFCAI 425
             +S K T +EW       N+  +K    DD   ILP+LK SYD L  + +K+C  +CA+
Sbjct: 356 ETMSCKRTVQEWRHAIYVLNSYAAKFSGMDDK--ILPLLKYSYDSLKGEDVKMCLLYCAL 413

Query: 426 FPKDYEIDVEMLVKLWMANDFIPSENGVG-LEKVGNRIFNELARRSFFQDVDETSLFKMY 484
           FP+D +I  E L++ W+  + I    G+   E  G  I   L R S   +  E     + 
Sbjct: 414 FPEDAKIRKENLIEYWICEEIIDGSEGIDKAENQGYEIIGSLVRASLLMEEVE-----LD 468

Query: 485 RRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDSSRHLFSSYHRMNTL 544
             + +C       +HD++ ++AL++  +     +G+ N   +++ S          +  +
Sbjct: 469 GANIVC-------LHDVVREMALWIASD-----LGKQNEAFIVRAS-----VGLREILKV 511

Query: 545 LDAFIEKRILPLRTVMFFGHLDG------FPQHLLKYNSLRALCIPNFRGRPCLIQAKHL 598
            +  + +R+  ++  +   HLDG          LL+   L  +    F   P        
Sbjct: 512 ENWNVVRRMSLMKNNI--AHLDGRLDCMELTTLLLQSTHLEKISSEFFNSMP-------- 561

Query: 599 HHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCT 658
             L  L+LS ++ +  LP  IS L +LQ             PK ++ +  L HLY +  +
Sbjct: 562 -KLAVLDLSGNYYLSELPNGISELVSLQ-YLNLSSTGIRHLPKGLQELKKLIHLYLERTS 619

Query: 659 DLECM 663
            L  M
Sbjct: 620 QLGSM 624
>AT5G05400.1 | chr5:1597745-1600369 REVERSE LENGTH=875
          Length = 874

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 32/323 (9%)

Query: 196 IMVLPIVGMGGLGKTTFAKLIYNEPQ-IKEHFQLNRWVCVSDEFDLSKIASKISMTTN-- 252
           + +L I GMGG+GKTT    I N+ + +   F +  WV VS    + +I   I    +  
Sbjct: 175 VGLLGIYGMGGVGKTTLLSQINNKFRTVSNDFDIAIWVVVSKNPTVKRIQEDIGKRLDLY 234

Query: 253 -----EKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTT 307
                +K  + +   +++ +  K+++L+LDD+W + VD  +      ++   GS I  T+
Sbjct: 235 NEGWEQKTENEIASTIKRSLENKKYMLLLDDMWTK-VDLANIGIPVPKRN--GSKIAFTS 291

Query: 308 RLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPL 367
           R  EV   MG  +   +T L     W++  R      +  P ++ ++      +C G PL
Sbjct: 292 RSNEVCGKMGVDKEIEVTCLMWDDAWDLFTRNMKETLESHP-KIPEVAKSIARKCNGLPL 350

Query: 368 AARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLP-SQMKLCFAFCAIF 426
           A   +G  ++ K + +EW+  +   V    ++ IL ILK SYDDL   + K CF F A+F
Sbjct: 351 ALNVIGETMARKKSIEEWHDAVG--VFSGIEADILSILKFSYDDLKCEKTKSCFLFSALF 408

Query: 427 PKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRR 486
           P+DYEI  + L++ W+    I    G+  +  G  I   L R    ++            
Sbjct: 409 PEDYEIGKDDLIEYWVGQGIILGSKGINYK--GYTIIGTLTRAYLLKE------------ 454

Query: 487 DKLCQFRKTCKIHDLMHDIALYV 509
               + ++  K+HD++ ++AL++
Sbjct: 455 ---SETKEKVKMHDVVREMALWI 474
>AT1G63360.1 | chr1:23499515-23502169 REVERSE LENGTH=885
          Length = 884

 Score =  100 bits (248), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 161/724 (22%), Positives = 271/724 (37%), Gaps = 122/724 (16%)

Query: 209 KTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSK----IASKISMTTNEKDCDNVLQK- 262
           KTT    +YN   + K  F +  WV VS EF + K    IA K+ +  +E    +  QK 
Sbjct: 185 KTTLLTQLYNMFNKDKCGFDIGIWVVVSQEFHVEKVQDEIAQKLGLGGDEWTQKDKSQKG 244

Query: 263 --LQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIMGTVQ 320
             L   +  K F+L LDD+W + VD  +++     +   G  +  TTR  EV   MG   
Sbjct: 245 ICLYNILREKSFVLFLDDIWEK-VD-LAEIGVPDPRTKKGRKLAFTTRSQEVCARMGVEH 302

Query: 321 AHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKT 380
              +  L+    +++ +++           +  +      +C G PLA   +G  +S K 
Sbjct: 303 PMEVQCLEENVAFDLFQKKVGQTTLGSDPGIPQLARIVAKKCCGLPLALNVIGETMSCKR 362

Query: 381 TPKEW-------NTLLSKSVIFDDDSGILPILKLSYDDLPS-QMKLCFAFCAIFPKDYEI 432
           T +EW       N+  ++ +  +D   +LP+LK SYD+L   Q+K    +CA++P+D +I
Sbjct: 363 TIQEWRHAIHVLNSYAAEFIGMEDK--VLPLLKYSYDNLKGEQVKSSLLYCALYPEDAKI 420

Query: 433 DVEMLVKLWMANDFIPSENGV-GLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQ 491
             E L++ W+  + I    G+   E  G  I   L R S   + D+              
Sbjct: 421 LKEDLIEHWICEEIIDGSEGIEKAEDKGYEIIGCLVRASLLMEWDDGD------------ 468

Query: 492 FRKTCKIHDLMHDIALYVMRE-----------ECVTVMGRPN--------SIQLLKDSSR 532
            R+   +HD++ ++AL++  E             V V   P          + L+++   
Sbjct: 469 GRRAVCMHDVVREMALWIASELGIQKEAFIVRAGVGVREIPKIKNWNVVRRMSLMENKIH 528

Query: 533 HLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRAL-CIPNFRGRPC 591
           HL  SY  M              L T++      G  +  LK  S     C+P       
Sbjct: 529 HLVGSYECME-------------LTTLLLGKREYGSIRSQLKTISSEFFNCMPK------ 569

Query: 592 LIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRH 651
                    L  L+LSH+ ++  LPEEIS L +L+             PK ++ +  + H
Sbjct: 570 ---------LAVLDLSHNKSLFELPEEISNLVSLK-YLNLLYTEISHLPKGIQELKKIIH 619

Query: 652 LYTQGCTDLECMPPELRKVTALQTLTYFVVGNSSDCSNVGEIHDXXXXXXXXXXXXXXXX 711
           L  +    LE +   +  +  L+ L  F      D + V E+                  
Sbjct: 620 LNLEYTRKLESITG-ISSLHNLKVLKLFRSRLPWDLNTVKELETLEHLEILTTTIDPRAK 678

Query: 712 XXXXXXXXXXXXVDLTHLCFKWSNDIEKDPEHYQNVLGALRPHAKLQLLKVQSFKGTNF- 770
                          +H     S  +E     Y + + +L  H  L+ L V + K   F 
Sbjct: 679 QFLS-----------SHRLLSHSRLLEI----YGSSVSSLNRH--LESLSVSTDKLREFQ 721

Query: 771 -------PTWMTDVCTFMNLTEIHLVDCPLCKEI------PKFWKLPALEVLHLTGLNKL 817
                     M  +C F++L ++++ +C   +E+      PK   L       L  +   
Sbjct: 722 IKSCSISEIKMGGICNFLSLVDVNIFNCEGLRELTFLIFAPKIRSLSVWHAKDLEDIINE 781

Query: 818 QSLCSGASDVIMCSAFQXXXXXXXXXXXXXXRWGTMEGKLGDEAIFPVLEDIHIKNCPEL 877
           +  C G    I+                    W  +         F  LE+I+I+ CP L
Sbjct: 782 EKACEGEESGILPFPELNFLTLHDLPKLKKIYWRPLP--------FLCLEEINIRECPNL 833

Query: 878 TVIP 881
             +P
Sbjct: 834 RKLP 837
>AT5G47260.1 | chr5:19189411-19192516 FORWARD LENGTH=949
          Length = 948

 Score = 94.4 bits (233), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 200/480 (41%), Gaps = 76/480 (15%)

Query: 195 DIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKIS------ 248
           ++  L I G GG+GKTT    + N+  + + F L  +V V  E ++  I  +I       
Sbjct: 168 NVGTLGIYGRGGVGKTTLLTKLRNKLLV-DAFGLVIFVVVGFE-EVESIQDEIGKRLGLQ 225

Query: 249 --MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTT 306
               T E+    +L  L++    KRF+L+LD +  R++D   ++         G  I+ T
Sbjct: 226 WRRETKERKAAEILAVLKE----KRFVLLLDGI-QRELD-LEEIGVPFPSRDNGCKIVFT 279

Query: 307 TRLAEVAQIMGTVQAH-NLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGS 365
           T+  E       V A   +T L     W++ +            ++  +       C G 
Sbjct: 280 TQSLEACDESKWVDAKVEITCLSPEEAWDLFQETVGENTLRSHQDIPKLARVVASTCRGL 339

Query: 366 PLAARAVGSVLSNKTTPKEW----NTLLSKSVIFDD-DSGILPILKLSYDDLPSQM-KLC 419
           PLA   +G  +S K T +EW    + L S +  F D + G LPILK  YD++  ++ +LC
Sbjct: 340 PLALNLIGEAMSGKRTVREWRYTIHVLASSTAEFPDMEDGTLPILKSIYDNMSDEIIRLC 399

Query: 420 FAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDVDETS 479
           F +CA+FP++ +I  E LV  W+    +  E+    E  G  I  +L R     +    +
Sbjct: 400 FLYCALFPENLDIGKEDLVNYWICEGILAKEDREEAEIQGYEIICDLVRMRLLMESGNGN 459

Query: 480 LFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGR------------------- 520
             KM               H ++ ++AL++  E  V V G                    
Sbjct: 460 CVKM---------------HGMVREMALWIASEHFVVVGGERIHQMLNVNDWRMIRRMSV 504

Query: 521 -PNSIQLLKDS------SRHLFSSYHRMNTLLDAFIEKRI-LPLRTVMFFGHLDGFPQH- 571
               IQ + DS      +  +F     +  +  AF +    L +  + F   L   P+  
Sbjct: 505 TSTQIQNISDSPQCSELTTLVFRRNRHLKWISGAFFQWMTGLVVLDLSFNRELAELPEEV 564

Query: 572 ----LLKYNSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQT 627
               LL++ +L   CI   +G P  +  K L  L +L+L ++ N++ + + I+ L NLQ 
Sbjct: 565 SSLVLLRFLNLSWTCI---KGLP--LGLKELKSLIHLDLDYTSNLQEV-DVIASLLNLQV 618
>AT1G62630.1 | chr1:23185912-23188593 FORWARD LENGTH=894
          Length = 893

 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 190/454 (41%), Gaps = 77/454 (16%)

Query: 209 KTTFAKLIYNE-PQIKEHFQLNRWVCVSDEFDLSKI----ASKISMTTNEKDCDNVLQK- 262
           KTT    ++N   + K  F +  WV VS E ++ KI    A K+ +  +E    ++ QK 
Sbjct: 185 KTTLLTQLFNMFNKDKCGFDIGIWVVVSQEVNVEKIQDEIAQKLGLGGHEWTQRDISQKG 244

Query: 263 --LQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIMGTVQ 320
             L   +  K+F+L LDD+W  D  + + +     +   G  +  T+R   V   MG  +
Sbjct: 245 VHLFNFLKNKKFVLFLDDLW--DKVELANIGVPDPRTQKGCKLAFTSRSLNVCTSMGDEE 302

Query: 321 AHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKT 380
              +  L+    +++ +++           +  +      +C G PLA   +G  +S K 
Sbjct: 303 PMEVQCLEENVAFDLFQKKVGQKTLGSDPGIPQLARIVAKKCCGLPLALNVIGETMSCKR 362

Query: 381 TPKEW-------NTLLSKSVIFDDDSGILPILKLSYDDLPSQ-MKLCFAFCAIFPKDYEI 432
           T +EW       N+  ++ +  +D   ILP+LK SYD+L  + +K    +CA++P+D +I
Sbjct: 363 TIQEWRNAIHVLNSYAAEFIGMEDK--ILPLLKYSYDNLKGEHVKSSLLYCALYPEDAKI 420

Query: 433 DVEMLVKLWMANDFIPSENGV-GLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLCQ 491
             E L++ W+  + I    G+   E  G  I   L R S   +  +             +
Sbjct: 421 RKEDLIEHWICEEIIDGSEGIEKAEDKGYDIIGSLVRASLLMECVDL------------K 468

Query: 492 FRKTCKIHDLMHDIALYVMRE-----------ECVTVMGRPN--------SIQLLKDSSR 532
            + +  +HD++ ++AL++  E             V V   P          + L+ +   
Sbjct: 469 GKSSVIMHDVVREMALWIASELGIQKEAFIVRAGVGVREIPKVKNWNVVRRMSLMGNKIH 528

Query: 533 HLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPNFRGRPCL 592
           HL  SY  M                T +  G  +G    + +++ ++ +    F   P  
Sbjct: 529 HLVGSYECMEL--------------TTLLLG--EGEYGSIWRWSEIKTISSEFFNCMP-- 570

Query: 593 IQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
                   L  L+LSH+ ++  LPEEIS L +L+
Sbjct: 571 -------KLAVLDLSHNQSLFELPEEISNLVSLK 597
>AT1G17600.1 | chr1:6053026-6056572 REVERSE LENGTH=1050
          Length = 1049

 Score = 77.0 bits (188), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 228/520 (43%), Gaps = 77/520 (14%)

Query: 192 ENNDIMVLPIVGMGGLGKTTFAKLIYNE--PQIKEHFQLNRWVCVSDE--FDL------- 240
           E+N+++++ I GMGG+GKT+  K +Y++  P+   H  +     VS +   DL       
Sbjct: 201 ESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVSKDNGHDLKHLQKEL 260

Query: 241 --SKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG- 297
             S +   I + + E  C    Q++++ +  ++  LVLD      VDK +++    ++  
Sbjct: 261 LSSILCDDIRLWSVEAGC----QEIKKRLGNQKVFLVLD-----GVDKVAQVHALAKEKN 311

Query: 298 --AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
               GS I+ TTR   +    G    + +  LD++   ++ ++ AF      P E  D +
Sbjct: 312 WFGPGSRIIITTRDMGLLNTCGVEVVYEVKCLDDKDALQMFKQIAFE-GGLPPCEGFDQL 370

Query: 356 DKFVDRCV-GSPLAARAVGSVLSNKT-TPKEWNTLLSKSVIFDDDSGILPILKLSYDDLP 413
                +   G P A +A    L  +T +P+EW   L  ++    D  I+ ILK+SY+ LP
Sbjct: 371 SIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALG-ALESSLDENIMEILKISYEGLP 429

Query: 414 SQMKLCF-AFCAIFPKDYEIDVEMLV-------KLWMANDFIPSENGVGLEKVGNRIFNE 465
              +  F     +F  D    +  L+        LW+    +  ++ + +   G+ I ++
Sbjct: 430 KPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIR--VLAEKSLIKISTNGSVIMHK 487

Query: 466 LARRSFFQDV-DETSLFKMYRRDKLCQFRKTCKIHDLMHD---IALYVMREECV-----T 516
           L  +   + + D+ SL + + RD + + R      D       + L+     CV     +
Sbjct: 488 LVEQMGREIIRDDMSLARKFLRDPM-EIRVALAFRDGGEQTECMCLHTCDMTCVLSMEAS 546

Query: 517 VMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYN 576
           V+GR ++++ LK   +H+   Y   N  L    ++  LP R++  F H D FP       
Sbjct: 547 VVGRMHNLKFLK-VYKHV--DYRESN--LQLIPDQPFLP-RSLRLF-HWDAFP------- 592

Query: 577 SLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXX 636
            LRAL  P+    PC         L  LNL HS ++E L     +L +L+          
Sbjct: 593 -LRAL--PS-GSDPCF--------LVELNLRHS-DLETLWSGTPMLKSLKRLDVTGSKHL 639

Query: 637 XXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTL 676
              P ++  +TSL  L  + CT LE +P  + K + L+ L
Sbjct: 640 KQLP-DLSSITSLEELLLEQCTRLEGIPECIGKRSTLKKL 678
>AT3G44670.1 | chr3:16217242-16221425 FORWARD LENGTH=1220
          Length = 1219

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 218/537 (40%), Gaps = 103/537 (19%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVC---------VSDEFD-- 239
           L+ +++ ++ I G  G+GKTT A+ ++N  Q+ + FQL+  +            DE+   
Sbjct: 284 LDLDEVRMIGIWGPPGIGKTTIARFLFN--QVSDRFQLSAIIVNIRGIYPRPCFDEYSAQ 341

Query: 240 LSKIASKISMTTNEKDC-DNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG- 297
           L      +S   N KD   + L   Q+ +  K+  LVLD     +VD+  +L    ++  
Sbjct: 342 LQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLD-----EVDQLGQLDALAKETR 396

Query: 298 --AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
               GS I+ TT    V +  G    + +    N   ++I    AF   +++P E  D +
Sbjct: 397 WFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAF--GQKQPHEGFDEI 454

Query: 356 DKFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPS 414
              V    G  PL  + +GS L  K+ P EW   L + +    D  I  I++ SYD L  
Sbjct: 455 AWEVMALAGELPLGLKVLGSALRGKSKP-EWERTLPR-LKTSLDGNIGSIIQFSYDGLCD 512

Query: 415 QMKLCFAFCA-IFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQ 473
           + K    + A +F  +    VE +    +AN F+  + G+ +          LA++S   
Sbjct: 513 EDKYLLLYIACLFNYESTTKVEEV----LANKFLDVKQGLHV----------LAQKSLIS 558

Query: 474 DVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECV--------TVMGRPNSIQ 525
            +DE SL+             T  +H L+        R++ V         ++G  +  +
Sbjct: 559 -IDENSLYG-----------DTINMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICE 606

Query: 526 LLKD---SSRHLFS-----------------SYHRMNTL----LDAFIEKRILPLRTVMF 561
           +L D    SR                     +  RMN      ++A I    L L     
Sbjct: 607 VLSDDTIDSRRFIGITFDLFGTQDYLNISEKALERMNDFEFVRINALIPTERLQLALQDL 666

Query: 562 FGHLDGFPQHLLKYNSLRALCIPNFRGRPCLIQ--------------AKHLHHLRYLNLS 607
             H        LK+ S + +C+P+      L++               K L +L++++LS
Sbjct: 667 ICHSPKIRS--LKWYSYQNICLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLS 724

Query: 608 HSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMP 664
           +S +++ LP  +S   NL+             P +++ +TSL+ LY Q C+ L  +P
Sbjct: 725 NSEDLKELP-NLSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP 780

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)

Query: 1113 LEHLNIGHCDSFTKVPDLPPS-----LQILHMYNCPNVRFLSGKLDA--LDSLYISDCKN 1165
            LE L + +C S  K   LPPS     LQ L + NC  V  L    +A  L  L + +C +
Sbjct: 788  LEELYLENCSSLEK---LPPSINANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSS 844

Query: 1166 LRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRLQQR- 1224
            L  L   +G   +L  L+I  C SLV LP   G  ++L+  ++  C  +  LP  +  + 
Sbjct: 845  LIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININLKF 904

Query: 1225 LDSLEEKDLSNMRS 1238
            LD+L     S ++S
Sbjct: 905  LDTLNLAGCSQLKS 918
>AT5G40910.1 | chr5:16395507-16399129 FORWARD LENGTH=1105
          Length = 1104

 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 228/538 (42%), Gaps = 74/538 (13%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKI--- 247
           LE++D+ ++ I G  G+GKTT A+ ++N  Q+   F+L+   C     D++   SK+   
Sbjct: 201 LESDDVKMIGIWGPAGIGKTTIARALFN--QLSTGFRLS---CFMGTIDVNDYDSKLCLQ 255

Query: 248 ----SMTTNEKDCD-NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSV 302
               S   N+KD   + L  +++ +  +R L+VLDDV   D+++   L         GS 
Sbjct: 256 NKLLSKILNQKDMKIHHLGAIEEWLHNQRVLIVLDDV--DDLEQLEVLAKESSWFGHGSR 313

Query: 303 ILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDK-FVDR 361
           I+ +    ++ +  G    +++         EI+   AF  K+  P +  + V K  V+ 
Sbjct: 314 IIVSLNDRKILKAHGINDIYDVDFPSEEEALEILCLSAF--KQNSPQDGFEEVAKRVVEL 371

Query: 362 CVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCFA 421
           C   PL  R VGS    ++   EW   L   +  + D  I  +L++ YD L  + +  F 
Sbjct: 372 CGKLPLGLRVVGSSFYGES-EDEWRIQL-YGIETNLDRKIENVLRVGYDKLSERHQSLFL 429

Query: 422 FCAIF------------PKDYEIDVEMLVKLWMANDFIPSENGVG----LEKVGNRIF-- 463
             A F              D  +DVE  +K   A   + +   +     L+++G ++   
Sbjct: 430 HIACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLVSTNGWITMHCLLQQLGRQVVVQ 489

Query: 464 -NELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRP- 521
             +  +R F  +  E        RD L     T  +  +  DI+    + E +++  R  
Sbjct: 490 QGDPGKRQFLVEAKEI-------RDVLANETGTESVIGISFDIS----KIETLSISKRAF 538

Query: 522 NSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRAL 581
           N ++ LK       + Y+   +LL+   +   LP   ++++G    +P+  L        
Sbjct: 539 NRMRNLK-----FLNFYNGSVSLLE---DMEYLPRLRLLYWG---SYPRKSLPLTFKPEC 587

Query: 582 CIPNFRGRPCLIQ----AKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXX 637
            +  + G   L +     + L +L+ +NL +S N++ +P  +S   NL+T          
Sbjct: 588 LVELYMGFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCESLV 646

Query: 638 XXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNSSDCSNVGEIHD 695
             P ++  +  L  LY  GC  L+ +P  +  + +L+ +      N S+CS +    D
Sbjct: 647 EIPSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEV------NMSNCSRLRSFPD 697
>AT4G33300.1 | chr4:16051162-16054005 REVERSE LENGTH=817
          Length = 816

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 149/342 (43%), Gaps = 40/342 (11%)

Query: 180 ETEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNR--WVCVSDE 237
           E  K K+ + + E+    V  I GMGG+GKTT AK +  + +++ HF+ NR  ++ VS  
Sbjct: 185 ELGKVKVKKMMFESQG-GVFGISGMGGVGKTTLAKELQRDHEVQCHFE-NRILFLTVSQS 242

Query: 238 FDLSKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVW-NRDVDKWSKLKTCLQQ 296
             L ++   I    +  +  N +        G R L++LDDVW  + +D+ +  K     
Sbjct: 243 PLLEELRELIWGFLSGCEAGNPVPDCNFPFDGARKLVILDDVWTTQALDRLTSFKF---P 299

Query: 297 GAAGSVI----LTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELV 352
           G    V+    LT  +     +++   +A +L  L            AF  K        
Sbjct: 300 GCTTLVVSRSKLTEPKFTYDVEVLSEDEAISLFCL-----------CAFGQKSIPLGFCK 348

Query: 353 DMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTL---LSKSVIFDD--DSGILPILKL 407
           D+V +  + C G PLA +  G+ L+ K     W  +   LSK    DD  +S +L  ++ 
Sbjct: 349 DLVKQVANECKGLPLALKVTGASLNGKPE-MYWKGVLQRLSKGEPADDSHESRLLRQMEA 407

Query: 408 SYDDLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELA 467
           S D+L    K CF     FP+D +I +++L+ +W+    I   N          I  +L+
Sbjct: 408 SLDNLDQTTKDCFLDLGAFPEDRKIPLDVLINIWIELHDIDEGNAFA-------ILVDLS 460

Query: 468 RRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYV 509
            ++      +  L  +Y       +      HD++ D+AL++
Sbjct: 461 HKNLLTLGKDPRLGSLYAS----HYDIFVTQHDVLRDLALHL 498

 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 1109 LLPCLEHLNIGHCDSFTKVPDLP---PSLQILHMYNCPNVRFLS---GKLDALDSLYISD 1162
            + P L  L I HCD    +P       SL  L + NCP +  L     KL AL+ L +  
Sbjct: 654  IFPKLGDLTIDHCDDLVALPSSICGLTSLSCLSITNCPRLGELPKNLSKLQALEILRLYA 713

Query: 1163 CKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYC 1211
            C  L++L   +  LP L  L I +C SL  LP+  G    LE ++++ C
Sbjct: 714  CPELKTLPGEICELPGLKYLDISQCVSLSCLPEEIGKLKKLEKIDMREC 762
>AT5G17680.1 | chr5:5822999-5827153 FORWARD LENGTH=1295
          Length = 1294

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 28/257 (10%)

Query: 193 NNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLN------RWVC-------VSDEFD 239
           + D+ +L I GMGG+GKTT AK +YN  Q+   FQ++      + VC       +  EF 
Sbjct: 203 DKDVRMLGIWGMGGVGKTTIAKYLYN--QLSGQFQVHCFMENVKEVCNRYGVRRLQVEFL 260

Query: 240 LSKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG-- 297
                 +     +   C N+   +++    K   +VLD     DVD+  +L   +++   
Sbjct: 261 CRMFQERDKEAWSSVSCCNI---IKERFRHKMVFIVLD-----DVDRSEQLNELVKETGW 312

Query: 298 -AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVD 356
              GS I+ TTR   +    G    + +  L  +   ++    AF  +   P    ++  
Sbjct: 313 FGPGSRIIVTTRDRHLLLSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSV 372

Query: 357 KFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQM 416
           + V+   G PLA R +GS L  ++   EW + L++   +   S I+ +L++SYD L  Q 
Sbjct: 373 QAVNYASGLPLALRVLGSFLYRRSQI-EWESTLARLKTY-PHSDIMEVLRVSYDGLDEQE 430

Query: 417 KLCFAFCAIFPKDYEID 433
           K  F + + F    ++D
Sbjct: 431 KAIFLYISCFYNMKQVD 447

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 117/301 (38%), Gaps = 34/301 (11%)

Query: 975  KYLQKLEIKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQG-------- 1026
            + L+K+++  C  L+  P  +     +L EL +  C++L  + P   + ++G        
Sbjct: 625  RNLKKMDLSRCKYLVEVP--DLSKATNLEELNLSYCQSLVEVTP-SIKNLKGLSCFYLTN 681

Query: 1027 --------IGQLLPRLKFLGIRNCQELTEIFNLPWSLKTIDIYRCPRLKSIYGKQEDSES 1078
                    IG +L  L+ +G+  C  L     + W+ + +           Y      E 
Sbjct: 682  CIQLKDIPIGIILKSLETVGMSGCSSLKHFPEISWNTRRL-----------YLSSTKIEE 730

Query: 1079 GSAHAEQLTTLLSKRMPDPXXXXXXXXTEHLLPCLEHLNIGHCDSFTKVPDLP---PSLQ 1135
              +   +L+ L+   M D             L  L+ LN+  C     +PD      SL+
Sbjct: 731  LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLE 790

Query: 1136 ILHMYNCPNVRFLSGKLDALDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPD 1195
             L +  C NV        +++ L IS+  ++  +   + NL  L SL I   K L SLP 
Sbjct: 791  TLEVSGCLNVNEFPRVSTSIEVLRISE-TSIEEIPARICNLSQLRSLDISENKRLASLPV 849

Query: 1196 GPGAYSSLETLEIKYCPAMKSLPGRLQQRLDSLEEKDLSNMRSSDPWEGIHSAFHFSFLR 1255
                  SLE L++  C  ++S P  + Q +  L   DL      +  E I +      L+
Sbjct: 850  SISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQ 909

Query: 1256 A 1256
            A
Sbjct: 910  A 910
>AT1G27170.1 | chr1:9434718-9439219 FORWARD LENGTH=1385
          Length = 1384

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 18/236 (7%)

Query: 196 IMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSK----------IAS 245
           + VL + GMGG+GKTT AK  YN  +I  +F+   ++    E   ++          I  
Sbjct: 211 VQVLGLYGMGGIGKTTLAKAFYN--KIVGNFEQRAFISDIRERSSAENGLVTLQKTLIKE 268

Query: 246 KISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILT 305
              +    +D    L+K++  V  K+ ++VLDDV +  +D+   L    +    G++I+ 
Sbjct: 269 LFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDH--IDQVHALVGETRWYGQGTLIVI 326

Query: 306 TTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSE-LVDMVDKFVDRCVG 364
           TTR +E+   +   Q + +  L      ++    +  L+KE+P++ L+ +  K V     
Sbjct: 327 TTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHS--LRKEEPTKNLLALSKKIVQISGL 384

Query: 365 SPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCF 420
            PLA    GS+L +K   K+W T L K +       +  +L+LS+  L  + K  F
Sbjct: 385 LPLAVEVFGSLLYDKKEEKDWQTQLDK-LKKTQPGNLQDVLELSFKSLDDEEKKVF 439
>AT5G45250.1 | chr5:18321914-18326022 REVERSE LENGTH=1218
          Length = 1217

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 17/245 (6%)

Query: 198 VLPIVGMGGLGKTTFAKLIYNEPQIK--EHFQLNRWVCVSDEFDLSKIASKI---SMTTN 252
           ++ +VGM G+GKTT  K +Y   Q K   H  +++    S   +L ++   +       N
Sbjct: 231 IIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLN 290

Query: 253 EKDCDNVLQKLQQEVSGKRFLLVLDDVWNRD-VDKWSKLKTCLQQGAAGSVILTTTRLAE 311
               DN L+    ++  ++ L+VLDDV  R+ +D   ++   +++G  GS ++  T  ++
Sbjct: 291 HPHVDN-LKDPYSQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIAT--SD 347

Query: 312 VAQIMGTV-QAHNLTTLDNRFLWEIIERRAFYLKKEKPS--ELVDMVDKFVDRCVGSPLA 368
           ++   G V   + +  L++R   ++    AF   +  P   + + + + FV    G PLA
Sbjct: 348 MSLTNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLA 407

Query: 369 ARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCFAFCAIF-- 426
            + +G  L NK +   WN+ + K +       I+ + ++SYD+L +  K  F   A F  
Sbjct: 408 LKVLGGEL-NKKSMDHWNSKM-KKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIACFRS 465

Query: 427 -PKDY 430
             KDY
Sbjct: 466 QDKDY 470
>AT1G33560.1 | chr1:12169092-12171878 FORWARD LENGTH=788
          Length = 787

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 129/280 (46%), Gaps = 32/280 (11%)

Query: 180 ETEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFD 239
           E  K+K+   + +  D  +  I GM G GKTT A  +  +  ++  F+ N+ + ++    
Sbjct: 170 ELGKKKVKEMMFKFTDTHLFGISGMSGSGKTTLAIELSKDDDVRGLFK-NKVLFLT---- 224

Query: 240 LSKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRD-VDKWSKLKTCLQQGA 298
                  +S + N ++ ++ +++   +   +R L++LDDVW R+ +D+       L    
Sbjct: 225 -------VSRSPNFENLESCIREFLYDGVHQRKLVILDDVWTRESLDR-------LMSKI 270

Query: 299 AGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVD-MVDK 357
            GS  L  +R    +++      +N+  L       ++   AF  +K  PS     +V +
Sbjct: 271 RGSTTLVVSR----SKLADPRTTYNVELLKKDEAMSLLCLCAFE-QKSPPSPFNKYLVKQ 325

Query: 358 FVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSK-----SVIFDDDSGILPILKLSYDDL 412
            VD C G PL+ + +G+ L NK   + W  ++ +     +     +S +   ++ S ++L
Sbjct: 326 VVDECKGLPLSLKVLGASLKNKPE-RYWEGVVKRLLRGEAADETHESRVFAHMEESLENL 384

Query: 413 PSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENG 452
             +++ CF     FP+D +I +++L  +W+    I  E  
Sbjct: 385 DPKIRDCFLDMGAFPEDKKIPLDLLTSVWVERHDIDEETA 424

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 6/116 (5%)

Query: 1109 LLPCLEHLNIGHCDSFTKVPDL--PPSLQILHMYNCPNVRFLSGKLD---ALDSLYISDC 1163
            + P L  L I HCD   ++  +    SL  L + NCP +  L   L    +L+ L +  C
Sbjct: 626  IFPSLSDLTIDHCDDLLELKSIFGITSLNSLSITNCPRILELPKNLSNVQSLERLRLYAC 685

Query: 1164 KNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPG 1219
              L SL   +  LP L  + I +C SLVSLP+  G   SLE ++++ C ++  LP 
Sbjct: 686  PELISLPVEVCELPCLKYVDISQCVSLVSLPEKFGKLGSLEKIDMREC-SLLGLPS 740
>AT3G44480.1 | chr3:16090878-16096041 REVERSE LENGTH=1195
          Length = 1194

 Score = 63.5 bits (153), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 123/537 (22%), Positives = 220/537 (40%), Gaps = 86/537 (16%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVC---------VSDEFD-- 239
           L+ +++ ++ I G  G+GKTT A+ ++N  Q+ + FQL+  +            DE+   
Sbjct: 288 LDLDEVRMIGIWGPPGIGKTTIARFLFN--QVSDRFQLSAIMVNIKGCYPRPCFDEYSAQ 345

Query: 240 LSKIASKISMTTNEKDC-DNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG- 297
           L      +S   N KD   + L   Q+ +  K+  LVLD     +VD+  +L    ++  
Sbjct: 346 LQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLD-----EVDQLGQLDALAKETR 400

Query: 298 --AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
               GS I+ TT    V +  G    + +    N   ++I    AF   +++P E  D +
Sbjct: 401 WFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAF--GQKQPHEGFDEI 458

Query: 356 DKFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPS 414
              V    G  PL  + +GS L  K+  +EW   L + +    D  I  I++ SYD L  
Sbjct: 459 AWEVTCLAGELPLGLKVLGSALRGKSK-REWERTLPR-LKTSLDGKIGSIIQFSYDVLCD 516

Query: 415 QMKLCFAFCA-IFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQ 473
           + K  F + A +F  +    V+ L+       F+  + G+ L          LA++S   
Sbjct: 517 EDKYLFLYIACLFNGESTTKVKELL-----GKFLDVKQGLHL----------LAQKSLIS 561

Query: 474 DVDETSLFKMYRRDKLCQF-RKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDSSR 532
              E    +++    L QF R+T +   + H    +  R+  V   G    +      SR
Sbjct: 562 FDGE----RIHMHTLLEQFGRETSRKQFVHHG---FTKRQLLVGARGICEVLDDDTTDSR 614

Query: 533 HLFSSYHRM-NTLLDAFIEKRILPLRTVMFFGHLDGF--PQHL----------------L 573
                +  + NT  +  I +++L       F  +D    P+ L                L
Sbjct: 615 RFIGIHLELSNTEEELNISEKVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSL 674

Query: 574 KYNSLRALCIPNFRGRPCLIQ--------------AKHLHHLRYLNLSHSWNMERLPEEI 619
            +    +LC+P+      L++               K L +L++++LS+S  ++ LP  +
Sbjct: 675 NWYGYESLCLPSTFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELP-NL 733

Query: 620 SILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTL 676
           S   NL+             P +++ +TSL+ L  + C+ LE +P  +   T L+ L
Sbjct: 734 STATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPA-IENATKLREL 789

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 1113 LEHLNIGHCDSFTKVP---DLPPSLQILHMYNCPNVRFLSGKLDA--LDSLYISDCKNLR 1167
            LE L + +C S  ++P   +   SLQIL + NC ++  L    +A  L  L + +C +L 
Sbjct: 739  LEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLI 798

Query: 1168 SLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLP---GRLQ 1222
             L   +G   +L  L+I  C SLV LP   G  + LE  ++  C ++ +LP   G LQ
Sbjct: 799  ELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQ 856

 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 1110 LPCLEHLNIGHCDSFTKVPDLPPS--LQILHMYNCPNVRFLS---GKLDALDSLYISDCK 1164
            L  L+ L++ +C S  K+P +  +  L+ L + NC ++  L    G    L  L IS C 
Sbjct: 760  LTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCS 819

Query: 1165 NLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRLQ-Q 1223
            +L  L   +G++  L    +  C SLV+LP   G   +L  L ++ C  +++LP  +  +
Sbjct: 820  SLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLK 879

Query: 1224 RLDSLEEKDLSNMRS 1238
             LD+L   D S ++S
Sbjct: 880  SLDTLNLTDCSQLKS 894
>AT5G46260.1 | chr5:18759102-18763358 REVERSE LENGTH=1206
          Length = 1205

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 142/686 (20%), Positives = 277/686 (40%), Gaps = 88/686 (12%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIAS----- 245
           LE+ ++ ++ I G  G+GKTT A+ ++N   +  HFQ+ +++  S  +   +I S     
Sbjct: 198 LESKEVKMVGIWGSSGIGKTTIARALFN--NLFRHFQVRKFIDRSFAYKSREIHSSANPD 255

Query: 246 --KISMTTNEKDCDNVLQK----------LQQEVSGKRFLLVLDDVWNRDVDKWSKLKTC 293
              + +   E     +L+           L + +  ++ L+++DDV ++ +     L   
Sbjct: 256 DHNMKLHLQESFLSEILRMPNIKIDHLGVLGERLQHQKVLIIIDDVDDQVI--LDSLVGK 313

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVD 353
            Q    GS I+  T         G  + + ++         ++ + AF  KK+ P E  +
Sbjct: 314 TQWFGNGSRIIVVTNNKHFLTAHGIDRMYEVSLPTEEHALAMLCQSAF--KKKSPPEGFE 371

Query: 354 MVDKFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDL 412
           M+   V R  GS PL  + +GS LS K   + W  +L +     +D  I  IL++SYD L
Sbjct: 372 MLVVQVARYAGSLPLVLKVLGSYLSGKDK-EYWIDMLPRLQNGLNDK-IERILRISYDGL 429

Query: 413 PSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNR----------- 461
            S+ +  F   A      E+     +K  +AN    +   VGL+ + ++           
Sbjct: 430 ESEDQAIFRHIACIFNHMEVTT---IKSLLANSIYGA--NVGLQNLVDKSIIHVRWGHVE 484

Query: 462 ---IFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHD------IALYVMR- 511
              +  E+ R+     V   S+ K  +R+ L      C +     D      I+L   + 
Sbjct: 485 MHPLLQEMGRKI----VRTQSIGKPRKREFLVDPNDICDVLSEGIDTQKVLGISLETSKI 540

Query: 512 -EECV--TVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGF 568
            E CV  +   R  +++ LK  +  +F   +R++ L ++F    + P   ++ +     F
Sbjct: 541 DELCVHESAFKRMRNLRFLKIGT-DIFGEENRLH-LPESF--DYLPPTLKLLCWSE---F 593

Query: 569 PQHLLKYN----SLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYN 624
           P   +  N    +L  L + N +       A  L  L+ ++L  S N++ +P ++S+  N
Sbjct: 594 PMRCMPSNFCPKNLVTLKMTNSKLHKLWEGAVPLTCLKEMDLDGSVNLKEIP-DLSMATN 652

Query: 625 LQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNS 684
           L+T            P  ++ +  L  L    C  LE +P     + +L  + +      
Sbjct: 653 LETLNFENCKSLVELPSFIQNLNKLLKLNMAFCNSLETLPTGF-NLKSLNRIDF------ 705

Query: 685 SDCSNVGEIHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLTHLCFKWSNDIEKDPEHY 744
           + CS +    D                            + L +L     +  E D + +
Sbjct: 706 TKCSKLRTFPD-------FSTNISDLYLTGTNIEELPSNLHLENLIDLRISKKEIDGKQW 758

Query: 745 QNVLGALRPHAKLQLLKVQSFKGTNFPTWMTDVCTFMNLTEIHLVDCPLCKE---IPKFW 801
           + V+  L+P   +    + S +  N P  +   C+F NL ++ ++D   C+    +P   
Sbjct: 759 EGVMKPLKPLLAMLSPTLTSLQLQNIPNLVELPCSFQNLIQLEVLDITNCRNLETLPTGI 818

Query: 802 KLPALEVLHLTGLNKLQSLCSGASDV 827
            L +L+ L   G ++L+S    ++++
Sbjct: 819 NLQSLDSLSFKGCSRLRSFPEISTNI 844
>AT2G16870.1 | chr2:7308077-7311686 REVERSE LENGTH=1110
          Length = 1109

 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 116/519 (22%), Positives = 212/519 (40%), Gaps = 58/519 (11%)

Query: 194 NDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWV--------CVSDEFD------ 239
           + + ++ I G  G+GKTT A+ +++    K+ FQL  +V           DE+       
Sbjct: 204 DGVKIVGIFGPAGIGKTTIARALHSLLLFKK-FQLTCFVDNLRGSYPIGIDEYGLKLRLQ 262

Query: 240 ---LSKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQ 296
              LSKI ++  M  +       L  +++ +   + L++LDDV   DV +   L      
Sbjct: 263 EHLLSKILNQDGMRISH------LGAVKERLCDMKVLIILDDV--NDVKQLEALANDTTW 314

Query: 297 GAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVD 356
              GS ++ TT   E+ Q  G    +++    +    EI+   AF     +P     +  
Sbjct: 315 FGPGSRVIVTTENKEILQRHGIDNMYHVGFPSDEKAMEILCGYAFKQSSPRPG-FNYLAQ 373

Query: 357 KFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSK-SVIFDDDSGILPILKLSYDDLPSQ 415
           K    C   PL  R VGS L  K    EW +++ +   I D D  I  +L++ Y+ L   
Sbjct: 374 KVTWLCGNLPLGLRVVGSSLRGK-KEDEWKSVIRRLDTIIDRD--IEDVLRVGYESLHEN 430

Query: 416 MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIF----NELARRSF 471
            +  F   A+F    ++D   LVK  +A+D +   +G+ +    + I+     E+     
Sbjct: 431 EQSLFLHIAVFFNCKDVD---LVKAMLADDNLDIAHGLKILVNKSLIYISTTGEIRMHKL 487

Query: 472 FQDVDETSLFKM--YRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSI----Q 525
            Q V   ++ +   ++R  L   ++ C +  L +D    V+        G    I     
Sbjct: 488 LQQVGRQAINRQEPWKRLILTNAQEICYV--LENDKGTGVVSGISFDTSGISEVILSNRA 545

Query: 526 LLKDSSRHLFSSY---HRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLLKYN----SL 578
           L + S+    S Y   H  N ++    E    P R  +   H + +P   L       +L
Sbjct: 546 LRRMSNLRFLSVYKTRHDGNNIMH-IPEDMKFPPRLRLL--HWEAYPSKSLPLGFCLENL 602

Query: 579 RALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXX 638
             L + + +        + L +L+ ++LS S +++ LP ++S   NL+            
Sbjct: 603 VELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELP-DLSNATNLERLELCDCRALVE 661

Query: 639 XPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLT 677
            PK++  +  L +L    C  LE +P  +  + +L+ +T
Sbjct: 662 LPKSIGNLHKLENLVMANCISLEVIPTHI-NLASLEHIT 699
>AT1G27180.1 | chr1:9439859-9445818 FORWARD LENGTH=1557
          Length = 1556

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 24/259 (9%)

Query: 196 IMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVC------VSDEFDLSKIASKI-- 247
           I V+ + GMGG+GKTT AK  YN  +I  +F  +R          SD+  L  +   +  
Sbjct: 384 IQVMGLYGMGGIGKTTLAKAFYN--KIIVNFNRHRVFIESVRGKSSDQDGLVNLQKTLIK 441

Query: 248 ---SMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVIL 304
               +    +D    L+K+++ V  K+ ++VLDDV +  +D+ + L         GS+I+
Sbjct: 442 ELFRLVPEIEDVSIGLEKIKENVHEKKIIVVLDDVDH--IDQVNALVGETSWYGEGSLIV 499

Query: 305 TTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFY-LKKEKP--SELVDMVDKFVDR 361
            TTR +E+   +   Q + +  L      + ++  +FY L+KEKP    L+++  K  + 
Sbjct: 500 ITTRDSEILSKLSVNQQYEVKCLTEP---QALKLFSFYSLRKEKPPTQGLLELSKKIAEV 556

Query: 362 CVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCFA 421
               PLA +  GS   +K    EW   L K     D   +  +L LS+  L  + K  F 
Sbjct: 557 TGLLPLAVKVFGSHFYDKDE-NEWQVELEKLKTQQDK--LHGVLALSFKSLDEEEKKIFL 613

Query: 422 FCAIFPKDYEIDVEMLVKL 440
             A      +I  E +V +
Sbjct: 614 DIACLFLKMDITKEEVVDI 632
>AT1G63870.1 | chr1:23707131-23711901 REVERSE LENGTH=1032
          Length = 1031

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 115/538 (21%), Positives = 216/538 (40%), Gaps = 68/538 (12%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKISMT 250
           L+ + + ++ I G  G+GKTT A+ +  + ++   FQL    C  D    S + S   + 
Sbjct: 206 LDYDGVKMVGISGPAGIGKTTIARAL--QSRLSNKFQL---TCFVDNLKESFLNSLDELR 260

Query: 251 TNEKDCDNVLQK----------LQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAG 300
             E+    VL            +++ +  +R L++LDDV    + +   L        +G
Sbjct: 261 LQEQFLAKVLNHDGIRICHSGVIEERLCKQRVLIILDDV--NHIMQLEALANETTWFGSG 318

Query: 301 SVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVD 360
           S I+ TT   E+ Q  G    +++    +   +EI+ R AF  +K   S   + + + V 
Sbjct: 319 SRIVVTTENKEILQQHGINDLYHVGFPSDEQAFEILCRYAF--RKTTLSHGFEKLARRVT 376

Query: 361 RCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLC 419
           +  G+ PL  R +GS L  K   +EW  ++ +     D   I  +L++ Y  L    +  
Sbjct: 377 KLCGNLPLGLRVLGSSLRGKNE-EEWEEVIRRLETILDHQDIEEVLRVGYGSLHENEQSL 435

Query: 420 FAFCAIFPK------------DYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELA 467
           F   A+F              D  +D++  +K+      I   N    E V +++  +  
Sbjct: 436 FLHIAVFFNYTDGDLVKAMFTDNNLDIKHGLKILADKSLINISN--NREIVIHKLLQQFG 493

Query: 468 RRSFFQDVDETSLFK---MYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGR---- 520
           R    Q V +   +K   +    ++C   +       M  I+  +   + V + G+    
Sbjct: 494 R----QAVHKEEPWKHKILIHAPEICDVLEYATGTKAMSGISFDISGVDEVVISGKSFKR 549

Query: 521 -PNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHLL----KY 575
            PN ++ LK     +F S    N  +    E+   P R  +   H + +P   L    + 
Sbjct: 550 IPN-LRFLK-----VFKSRDDGNDRVH-IPEETEFPRRLRLL--HWEAYPCKSLPPTFQP 600

Query: 576 NSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQTXXXXXXXX 635
             L  L +P+ +        + L HL+ +NL  S +++ LP ++S   NL+         
Sbjct: 601 QYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELP-DLSNATNLERMDLSYCES 659

Query: 636 XXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVGNSSDCSNVGEI 693
               P +  ++  L  L    C +L+ +P  +  + +L+T+      N   CS +  I
Sbjct: 660 LVEIPSSFSHLHKLEWLEMNNCINLQVIPAHM-NLASLETV------NMRGCSRLRNI 710
>AT5G41550.1 | chr5:16617232-16620785 REVERSE LENGTH=1086
          Length = 1085

 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 23/276 (8%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLN----------RWVCVSDEFDL 240
            E +D+ ++ I G  G+GK+T A+ +YN  Q+   FQL           + +   D ++ 
Sbjct: 202 FEGDDVKMIGIWGPAGIGKSTIARALYN--QLSSSFQLKCFMGNLKGSLKSIVGVDHYEF 259

Query: 241 SKIASKISMTT--NEKDCD-NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG 297
            K   K+ +    N+ D   + L  +++ +  +R L++LDDV   D+++   L   L   
Sbjct: 260 QKSLQKLLLAKILNQGDMRVHNLAAIKEWLQDQRVLIILDDV--DDLEQLEVLAKELSWF 317

Query: 298 AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDK 357
            +GS I+  T   ++ +  G    +++         EI+   AF  +   P    ++  K
Sbjct: 318 GSGSRIIVATEDKKILKEHGINDIYHVDFPSMEEALEILCLSAFK-QSSVPDGFEELAKK 376

Query: 358 FVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMK 417
            V  C   PL    VGS L  ++   EW   L + +    D  I  ILK+ Y+ L  + +
Sbjct: 377 VVHLCGNLPLGLSIVGSSLRGESK-HEWELQLPR-IEASLDGKIESILKVGYERLSKKNQ 434

Query: 418 LCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGV 453
             F   A F     +D    V + +A+  +   NG+
Sbjct: 435 SLFLHIACFFNYRSVD---YVTVMLADSNLDVRNGL 467
>AT5G51630.1 | chr5:20970069-20974666 FORWARD LENGTH=1230
          Length = 1229

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 131/608 (21%), Positives = 238/608 (39%), Gaps = 126/608 (20%)

Query: 157 SKQWRQTDSIIDYSEKDIVERSRETEKQ-------------KIVRSLL--ENNDIMVLPI 201
           SK W    ++I++  KD++ +   T                K V+S+L  E+ +  ++ I
Sbjct: 152 SKNWPNEANMIEHIAKDVLNKLIATSSSNCFGDLVGIEAHLKAVKSILCLESEEARMVGI 211

Query: 202 VGMGGLGKTTFAKLIYNE--PQIKEHFQLNRWVCVSDEFD--LSKIASKISMTTNEKDCD 257
           +G  G+GKTT A+++Y++   Q   H   +      D +   LS     +S   ++KD  
Sbjct: 212 LGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLSEILDQKDLK 271

Query: 258 -NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG---AAGSVILTTTRLAEVA 313
            + L  ++Q +  K+ L+VLDDV N ++     LKT + Q      GS I+ TT+   + 
Sbjct: 272 ISQLGVVKQRLKHKKVLIVLDDVDNLEL-----LKTLVGQTGWFGPGSRIIVTTQDRILL 326

Query: 314 QIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAARAVG 373
           +       + +     +    I+ R AF  +   P   + + ++  +     PLA   +G
Sbjct: 327 KSHKIDHIYEVGYPSRKLALRILCRSAFD-RNSPPDGFMQLANEVTELVGNLPLALNIMG 385

Query: 374 SVLSNKTTPKEWNTL---LSKSVIFDDDSGILPILKLSYDDLPSQMKLCFAFCAIFPKDY 430
           S L  +   +EW  +   L  S++   D  IL  L++SYD L    +  F + A      
Sbjct: 386 SSLKGRDK-EEWIEMMPSLRNSLV---DGEILKTLRVSYDRLHGNYQEIFLYIACLLNC- 440

Query: 431 EIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRDKLC 490
              VE ++ +   N  I           G +I   LA +S                  + 
Sbjct: 441 -CGVEYIISMLGDNAII-----------GLKI---LAEKSLIH---------------IS 470

Query: 491 QFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDSSR--HLFSSYHRMNTLLDAF 548
              KT ++H L+  +   ++R+E     G P   + L D+     +F+      T+L   
Sbjct: 471 PLDKTVEMHSLLQKLGRKIVRDES---FGNPGKRRFLLDAEDICDVFTDNTGTETVLGIS 527

Query: 549 I------------EKRILPLRTVMFF--------GHLDG---FPQ---------HLLKYN 576
           +            +K    +  + F         G  +G    PQ          LL + 
Sbjct: 528 LNTLEINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWY 587

Query: 577 SLRALCIP-NFRGRPCLI-------------QAKHLHHLRYLNLSHSWNMERLPEEISIL 622
                C+P NF+    +                + L  L+ ++LS S N++ +P ++S  
Sbjct: 588 KFPLRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIP-DLSYA 646

Query: 623 YNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTLTYFVVG 682
            NL+             P +++ +  LR L    C+++E +P +L     L++L      
Sbjct: 647 VNLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDLN----LESLDLL--- 699

Query: 683 NSSDCSNV 690
           N  DCS +
Sbjct: 700 NLEDCSQL 707
>AT5G04720.1 | chr5:1360748-1363665 FORWARD LENGTH=812
          Length = 811

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 7/118 (5%)

Query: 1108 HLLPCLEHLNIGHCDSFTKVPDLP---PSLQILHMYNCPNVRFLS---GKLDALDSLYIS 1161
             + P L  L I HCD   ++P       SL  + + NCP ++ L     KL AL  L + 
Sbjct: 648  QIFPKLSDLTIDHCDDLLELPSTICGITSLNSISITNCPRIKELPKNLSKLKALQLLRLY 707

Query: 1162 DCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPG 1219
             C  L SL   +  LP L  + I +C SL SLP+  G   +LE ++ + C ++ S+P 
Sbjct: 708  ACHELNSLPVEICELPRLKYVDISQCVSLSSLPEKIGKVKTLEKIDTREC-SLSSIPN 764

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 40/320 (12%)

Query: 198 VLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNR--WVCVSDEFDLSKIASKI--SMTTNE 253
           ++ I GM G GKTT AK +  + +++ HF  N+  ++ VS   +L ++ + I   +T+ E
Sbjct: 202 LIGISGMSGSGKTTLAKELARDEEVRGHFG-NKVLFLTVSQSPNLEELRAHIWGFLTSYE 260

Query: 254 KDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVA 313
                 L +        R L++LDDVW R+      L   + +   G+  L  +R +++A
Sbjct: 261 AGVGATLPE-------SRKLVILDDVWTRE-----SLDQLMFENIPGTTTLVVSR-SKLA 307

Query: 314 QIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELV-DMVDKFVDRCVGSPLAARAV 372
               T     L   +   L+ +    + + +K  PS     +V + V  C G PL+ + +
Sbjct: 308 DSRVTYDVELLNEHEATALFCL----SVFNQKLVPSGFSQSLVKQVVGECKGLPLSLKVI 363

Query: 373 GSVLSNKTTPKEWNTL---LSKSVIFDD--DSGILPILKLSYDDLPSQMKLCFAFCAIFP 427
           G+ L  +   K W      LS+    D+  +S +   ++ + ++L  + + CF     FP
Sbjct: 364 GASLKER-PEKYWEGAVERLSRGEPADETHESRVFAQIEATLENLDPKTRDCFLVLGAFP 422

Query: 428 KDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDVDETSLFKMYRRD 487
           +D +I +++L+ + +    +              +  +LA R+    V +     MY   
Sbjct: 423 EDKKIPLDVLINVLVELHDLEDATAFA-------VIVDLANRNLLTLVKDPRFGHMYT-- 473

Query: 488 KLCQFRKTCKIHDLMHDIAL 507
               +      HD++ D+AL
Sbjct: 474 --SYYDIFVTQHDVLRDVAL 491
>AT3G15700.1 | chr3:5321136-5322376 REVERSE LENGTH=376
          Length = 375

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 17/204 (8%)

Query: 198 VLPIVGMGGLGKTTFAKLIYNEPQIKEH----FQLNRWVCVSDEFDLSKIASKISMTTNE 253
           ++ + G+ G+GKTT    + N  ++ +H    F    WV VS   +L KI   I      
Sbjct: 162 IIGLYGVEGVGKTTVLTQVNN--RLLQHKLNGFDFVIWVFVSKNVNLEKIQDTIREKIGF 219

Query: 254 KDCDNVLQKLQQEVSGK--------RFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILT 305
            D  + + K ++E +GK        RF L LDDVW + VD   K       G   S I+ 
Sbjct: 220 LD-RSWMSKTEEEKAGKIFEILSKRRFALFLDDVWEK-VD-LVKAGVPPPDGLNRSKIVF 276

Query: 306 TTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGS 365
           TT   EV Q MG      +  L     W++ +  A     +   ++  +  +   +C G 
Sbjct: 277 TTCSDEVCQEMGAQTKIKMEKLPWERAWDLFKMNAGEEIVKSHPDITKVAQEVAAKCDGL 336

Query: 366 PLAARAVGSVLSNKTTPKEWNTLL 389
           PLA   +G  +++K TP+EW   L
Sbjct: 337 PLALVTIGRAMASKKTPQEWRDAL 360
>AT5G47280.1 | chr5:19193157-19195559 FORWARD LENGTH=624
          Length = 623

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 7/118 (5%)

Query: 1108 HLLPCLEHLNIGHCDSFTKVPDLP---PSLQILHMYNCPNVRFLS---GKLDALDSLYIS 1161
             + P L  + I +CD   ++P       SL  + + NCPN++ L     KL AL  L + 
Sbjct: 460  QIFPKLTDITIDYCDDLAELPSTICGITSLNSISITNCPNIKELPKNISKLQALQLLRLY 519

Query: 1162 DCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPG 1219
             C  L+SL   +  LP L  + I  C SL SLP+  G   +LE ++++ C ++ S+P 
Sbjct: 520  ACPELKSLPVEICELPRLVYVDISHCLSLSSLPEKIGNVRTLEKIDMREC-SLSSIPS 576

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 148/329 (44%), Gaps = 41/329 (12%)

Query: 193 NNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNR--WVCVSDEFDLSKIASKIS-- 248
           N++  ++ I GM G GKT  AK +  + +++ HF  NR  ++ VS   +L ++ S I   
Sbjct: 6   NDEARIIGISGMIGSGKTILAKELARDEEVRGHFA-NRVLFLTVSQSPNLEELRSLIRDF 64

Query: 249 MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRD-VDKWSKLKTCLQQGAAGSVILTTT 307
           +T +E         L + V   R L++LDDV  R+ +D+       L     G    TTT
Sbjct: 65  LTGHEAGFGTA---LPESVGHTRKLVILDDVRTRESLDQ-------LMFNIPG----TTT 110

Query: 308 RLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPL 367
            +   ++++     +++  L+      +    AF  K         +V + V    G PL
Sbjct: 111 LVVSQSKLVDPRTTYDVELLNEHDATSLFCLSAFNQKSVPSGFSKSLVKQVVGESKGLPL 170

Query: 368 AARAVGSVLSNKTTPKEWNTL----LSKSVIFDD--DSGILPILKLSYDDLPSQMKLCFA 421
           + + +G+ L+++  P+ +  +    LS+    D+  +S +   ++ + ++L  + K CF 
Sbjct: 171 SLKVLGASLNDR--PETYWAIAVERLSRGEPVDETHESKVFAQIEATLENLDPKTKECFL 228

Query: 422 FCAIFPKDYEIDVEMLVKLWMA-NDFIPSENGVGLEKVGNRIFNELARRSFFQDVDETSL 480
               FP+  +I V++L+ + +  +D    E+    +     +  +LA R+    V + + 
Sbjct: 229 DMGAFPEGKKIPVDVLINMLVKIHDL---EDAAAFD-----VLVDLANRNLLTLVKDPTF 280

Query: 481 FKMYRRDKLCQFRKTCKIHDLMHDIALYV 509
             M        +      HD++ D+AL++
Sbjct: 281 VAM----GTSYYDIFVTQHDVLRDVALHL 305
>AT1G69550.1 | chr1:26148836-26153374 REVERSE LENGTH=1401
          Length = 1400

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 124/551 (22%), Positives = 221/551 (40%), Gaps = 99/551 (17%)

Query: 182 EKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLN----------RW 231
           EK K +  L   ++   + I G  G+GK+T A++++N  QI + FQ++          R 
Sbjct: 262 EKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHN--QISDGFQMSVFMKFKPSYTRP 319

Query: 232 VCVSDEFDLSKIASK--ISMTTNEKDCD-NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWS 288
           +C SD+ D+     +  ++   N++D   + L   Q  V GK+ L+VLD      VD+  
Sbjct: 320 IC-SDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLD-----GVDQLV 373

Query: 289 KL-----KTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYL 343
           +L       CL     GS I+ TT+  ++ +       +N+    +    +I    AF  
Sbjct: 374 QLLAMPKAVCL---GPGSRIIITTQDQQLLKAFQIKHIYNVDFPPDHEALQIFCIHAF-- 428

Query: 344 KKEKPSELVDMVDKFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGIL 402
             + P +  + +   V R  G+ PL  R +GS      + ++W   L +  I   D  I 
Sbjct: 429 GHDSPDDGFEKLATKVTRLAGNLPLGLRVMGSHFRG-MSKEDWKGELPRLRI-RLDGEIG 486

Query: 403 PILKLSYDDLPSQMKLCFAFCAIFPKDYEID-----------------VEMLVKLWMAND 445
            ILK SYD L  + K  F   A F  D  ID                 +++LV+  + ++
Sbjct: 487 SILKFSYDVLDDEDKDLFLHIACFFNDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLISE 546

Query: 446 FI--PSEN---GVGLEKVGNRIFNELARRSFFQDVDETSL---------------FKMYR 485
            +  P  N    +G E V N+   E  +R F  D  E                  F++Y 
Sbjct: 547 DLTQPMHNLLVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYW 606

Query: 486 RDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDSSRHLFSSYHRMNTLL 545
              + +   + ++ + M ++  +   E     +  P  +  L    R L   Y+ M +L 
Sbjct: 607 --SMDELNISDRVFEGMSNLQFFRFDENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLP 664

Query: 546 DAFIEKRILPLRTVMFFGHLDGFPQHLLKYNSLRALCIPNFRGRPCLIQAKHLHHLRYLN 605
             F               +L    + +LK++ L  L    + G       + L +L+ ++
Sbjct: 665 SKF---------------NLKFLVKIILKHSELEKL----WEG------IQPLVNLKVMD 699

Query: 606 LSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPP 665
           L +S +++ LP  +S   NL              P ++   T+++ L  QGC+ L  +P 
Sbjct: 700 LRYSSHLKELP-NLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPS 758

Query: 666 ELRKVTALQTL 676
            +  +  L  L
Sbjct: 759 SIGNLITLPRL 769

 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 151/364 (41%), Gaps = 72/364 (19%)

Query: 866  LEDIHIKNCPELTVIPEAP----KIGTLKLEENKPHLSLLVVGSRYMSLLSKMELSIDDI 921
            L+++++  C  L  +P +      + TL L E     SL+ + S   +L++  EL + + 
Sbjct: 910  LQELYLSECSSLVELPSSIGNLINLKTLNLSECS---SLVELPSSIGNLINLQELYLSEC 966

Query: 922  EAALIPDQSSVETLDDKDIWNSEASVTEMKLDGCNMFFPTTPSKPTVGLWKWCKYLQKLE 981
             ++L+   SS+  L          ++ ++ L GC+       S   +        L+ L 
Sbjct: 967  -SSLVELPSSIGNL---------INLKKLDLSGCSSLVELPLSIGNL------INLKTLN 1010

Query: 982  IKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQGIGQLLPRLKFLGIRN 1041
            +  C  L+  P     +L +L EL +  C +L        E    IG L+  LK L +  
Sbjct: 1011 LSECSSLVELPS-SIGNLINLQELYLSECSSLV-------ELPSSIGNLI-NLKKLDLSG 1061

Query: 1042 CQELTEIFNLPWS------LKTIDIYRCPRLKSIYGKQEDSESGSAHAEQLT-TLLSKRM 1094
            C  L E   LP S      LKT+++  C  L  +      S  G+ + ++L  +  S  +
Sbjct: 1062 CSSLVE---LPLSIGNLINLKTLNLSGCSSLVEL-----PSSIGNLNLKKLDLSGCSSLV 1113

Query: 1095 PDPXXXXXXXXTEHLLPCLEHLNIGHCDSFTKVPDLPPSLQILHMYNCPNVRFLSGKLDA 1154
              P            L  L+ L++  C S  ++P     L I             G L  
Sbjct: 1114 ELPSSIGN-------LINLKKLDLSGCSSLVELP-----LSI-------------GNLIN 1148

Query: 1155 LDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAM 1214
            L  LY+S+C +L  L   +GNL +L  L +  C SLV LP   G   +L+ L++  C  +
Sbjct: 1149 LQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKL 1208

Query: 1215 KSLP 1218
             SLP
Sbjct: 1209 VSLP 1212

 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 48/268 (17%)

Query: 977  LQKLEIKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQGIGQLLPRLKF 1036
            L+KL++  C  L+  P     +L +L EL +  C +L        E    IG L+  LK 
Sbjct: 886  LKKLDLSGCSSLVELP-LSIGNLINLQELYLSECSSLV-------ELPSSIGNLI-NLKT 936

Query: 1037 LGIRNCQELTEIFNLPWSLKTIDIYRCPRLKSIYGKQEDSESGSAHAEQLTTLLSKRMPD 1096
            L +  C  L E   LP S+  +       L+ +Y              + ++L+   +P 
Sbjct: 937  LNLSECSSLVE---LPSSIGNL-----INLQELY------------LSECSSLV--ELPS 974

Query: 1097 PXXXXXXXXTEHLLPCLEHLNIGHCDSFTKVP---DLPPSLQILHMYNCPNVRFLS---G 1150
                         L  L+ L++  C S  ++P       +L+ L++  C ++  L    G
Sbjct: 975  SIGN---------LINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIG 1025

Query: 1151 KLDALDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKY 1210
             L  L  LY+S+C +L  L   +GNL +L  L +  C SLV LP   G   +L+TL +  
Sbjct: 1026 NLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSG 1085

Query: 1211 CPAMKSLPGRLQQRLDSLEEKDLSNMRS 1238
            C ++  LP  +     +L++ DLS   S
Sbjct: 1086 CSSLVELPSSIGNL--NLKKLDLSGCSS 1111

 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 38/283 (13%)

Query: 977  LQKLEIKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQGIGQLLPRLKF 1036
            L+ L +  C  L+  P     +L +L EL +  C +L        E    IG L+  LK 
Sbjct: 934  LKTLNLSECSSLVELPS-SIGNLINLQELYLSECSSLV-------ELPSSIGNLI-NLKK 984

Query: 1037 LGIRNCQELTEIFNLPWS------LKTIDIYRCPRL-------KSIYGKQEDSESGSAHA 1083
            L +  C  L E   LP S      LKT+++  C  L        ++   QE   S  +  
Sbjct: 985  LDLSGCSSLVE---LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSL 1041

Query: 1084 EQLTTLLSKRMPDPXXXXXXXXTEHLLPC-------LEHLNIGHCDSFTKVPDLPPSLQI 1136
             +L + +   +           +   LP        L+ LN+  C S  ++P    +L +
Sbjct: 1042 VELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNL 1101

Query: 1137 --LHMYNCPNVRFLS---GKLDALDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLV 1191
              L +  C ++  L    G L  L  L +S C +L  L   +GNL +L  L +  C SLV
Sbjct: 1102 KKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLV 1161

Query: 1192 SLPDGPGAYSSLETLEIKYCPAMKSLPGRLQQRLDSLEEKDLS 1234
             LP   G   +L+ L +  C ++  LP  +   L +L++ DL+
Sbjct: 1162 ELPSSIGNLINLQELYLSECSSLVELPSSIGN-LINLKKLDLN 1203
>AT1G52660.1 | chr1:19613475-19614796 FORWARD LENGTH=380
          Length = 379

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 13/208 (6%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNE--PQIKEHFQLNRWVCVSDEFDLSKIASKI- 247
           +EN  I+ L   G+ G+GKTT    + N    Q    F    WV VS   +L KI   I 
Sbjct: 157 MENTGIIGL--YGVEGVGKTTVLTQVNNRLLQQKANGFDFVLWVFVSKNLNLQKIQDTIR 214

Query: 248 ------SMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGS 301
                   T   K  +    K+ + +S +RF L LDDVW + VD   K           S
Sbjct: 215 EKIGFLDRTWTSKSEEEKAAKIFEILSKRRFALFLDDVWEK-VD-LVKAGVPPPDAQNRS 272

Query: 302 VILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDR 361
            I+ TT   EV + M       +  L     W++ ++       +   ++  +  +   R
Sbjct: 273 KIVFTTCSEEVCKEMSAQTKIKVEKLAWERAWDLFKKNVGEDTIKSHPDIAKVAQEVAAR 332

Query: 362 CVGSPLAARAVGSVLSNKTTPKEWNTLL 389
           C G PLA   +G  +++K TP+EW   L
Sbjct: 333 CDGLPLALVTIGRAMASKKTPQEWRDAL 360
>AT3G25510.1 | chr3:9260838-9268797 REVERSE LENGTH=1982
          Length = 1981

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 1113 LEHLNIGHCDSFTKVPDLPPS---LQILHMYNCPNVRFLSGKLDALDSLY---ISDCKNL 1166
            L  L++  C S  ++P    +   LQ+L+++NC N+  L        +L+   +S C +L
Sbjct: 879  LWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSL 938

Query: 1167 RSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRLQQRLD 1226
              L   +GN+ +L  L++  C +LV LP   G    L TL +  C  +++LP  +   L 
Sbjct: 939  VELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNIN--LK 996

Query: 1227 SLEEKDLSN 1235
            SLE  DL++
Sbjct: 997  SLERLDLTD 1005

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 7/129 (5%)

Query: 1113 LEHLNIGHCDSFTKVPDL---PPSLQILHMYNCPNVRFLSGKLDALDSLY---ISDCKNL 1166
            L++L++ +C S  K+P       +L+IL +  C ++  +   +  + +L+   +S C +L
Sbjct: 831  LQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSL 890

Query: 1167 RSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRLQQRLD 1226
              L   +GN+  L  L+++ C +LV LP   G  ++L  L++  C ++  LP  +   + 
Sbjct: 891  VELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIGN-IT 949

Query: 1227 SLEEKDLSN 1235
            +L+E +L N
Sbjct: 950  NLQELNLCN 958
>AT5G45230.1 | chr5:18302147-18308303 REVERSE LENGTH=1232
          Length = 1231

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 19/203 (9%)

Query: 1017 MPVDGEPIQGIGQLLPRLKFLGIRNCQELTEIFNLPWSLKTIDIYRCPRLKSIYGKQEDS 1076
            +P D  P   I   LP      + +C ++    NL W    +D+     L S+ G  E  
Sbjct: 628  LPPDFYPNNLIDLRLPYSNITTLWSCTKVAP--NLKW----VDLSHSSNLNSLMGLSEAP 681

Query: 1077 ESGSAHAEQLTTLLSKRMPDPXXXXXXXXTEHLLPCLEHLNIGHCDSFTKVPDLPP-SLQ 1135
                 + E  T+L  K +PD             +  L  LN+  C S   +P +   SL+
Sbjct: 682  NLLRLNLEGCTSL--KELPDEMKD---------MTNLVFLNLRGCTSLLSLPKITTNSLK 730

Query: 1136 ILHMYNCPNVRFLSGKLDALDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPD 1195
             L +  C + +      + L+SLY++  + +  L P +GNL  L  L++  CK+L +LPD
Sbjct: 731  TLILSGCSSFQTFEVISEHLESLYLNGTE-INGLPPAIGNLHRLIFLNLKDCKNLATLPD 789

Query: 1196 GPGAYSSLETLEIKYCPAMKSLP 1218
              G   SL+ L++  C  +K  P
Sbjct: 790  CLGELKSLQELKLSRCSKLKIFP 812
>AT5G44510.1 | chr5:17929673-17934188 REVERSE LENGTH=1188
          Length = 1187

 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 125/569 (21%), Positives = 220/569 (38%), Gaps = 95/569 (16%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWV----------CVSDEFDL 240
           L+  ++ ++ I G  G+GKTT ++++YN  ++   FQL   +          C  DE+  
Sbjct: 229 LDLEEVRMIGIWGPAGIGKTTISRVLYN--KLFHQFQLGAIIDNIKVRYPRPC-HDEYSA 285

Query: 241 SKIASK--ISMTTNEKDCDNVLQKL---QQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQ 295
                K  +S   N+KD   V+  L   Q+ +  K+ LLVLDDV    + +   +   +Q
Sbjct: 286 KLQLQKELLSQMINQKDM--VVPHLGVAQERLKDKKVLLVLDDV--DGLVQLDAMAKDVQ 341

Query: 296 QGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
               GS I+  T+  ++ +  G    + +    +    EI    AF   ++ P    + +
Sbjct: 342 WFGLGSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAF--GEKSPKVGFEQI 399

Query: 356 DKFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSK-SVIFDDDSGILPILKLSYDDLP 413
            + V    G  PL  R +GS L  + + +EW   + +     DDD  I  +LK SY+ L 
Sbjct: 400 ARTVTTLAGKLPLGLRVMGSYL-RRMSKQEWAKSIPRLRTSLDDD--IESVLKFSYNSLA 456

Query: 414 SQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENG--------------------- 452
            Q K  F     F +   I+    +++++A   +    G                     
Sbjct: 457 EQEKDLFLHITCFFRRERIET---LEVFLAKKSVDMRQGLQILADKSLLSLNLGNIEMHN 513

Query: 453 ----VGLEKVGNRIFNELARRSFFQD--------VDETSLFKMYRRDKLCQ--------- 491
               +GL+ V  +  ++  +R F  D         D+T    +   D             
Sbjct: 514 LLVQLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINI 573

Query: 492 ----FRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDA 547
               F + C +  L      +   + C  ++  P  +  +    R L    + +  L   
Sbjct: 574 SERAFERMCNLQFLRFH---HPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPK 630

Query: 548 FIEKRI--LPLRTVMFFGHLDGF-PQHLLKYNSLRALCIPNFRGRPCLIQAKHLHHLRYL 604
           F  + +  + +R  M     DG  P   LK+  L + C+ N +  P    A +L  LR +
Sbjct: 631 FNPEFLVKINMRDSMLEKLWDGNEPIRNLKWMDL-SFCV-NLKELPDFSTATNLQELRLI 688

Query: 605 NLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMP 664
           N     ++  LP  I    NL              P ++  +T+L+ L+   C+ L  +P
Sbjct: 689 N---CLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLP 745

Query: 665 PELRKVTALQTLTYFVVGNSSDCSNVGEI 693
                VT+L+ L      N S CS++ EI
Sbjct: 746 SSFGNVTSLKEL------NLSGCSSLLEI 768

 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 124/301 (41%), Gaps = 52/301 (17%)

Query: 977  LQKLEIKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQGIGQLLPRLKF 1036
            LQ+L + +C  L+  P     +  +L EL +  C +L  +    G         L  LK 
Sbjct: 682  LQELRLINCLSLVELPS-SIGNATNLLELDLIDCSSLVKLPSSIGN--------LTNLKK 732

Query: 1037 LGIRNCQELTEI---FNLPWSLKTIDIYRCPRLKSIYGKQEDSES-GSAHAEQLTTLLSK 1092
            L +  C  L ++   F    SLK +++  C  L  I     +  +    +A+  ++L+  
Sbjct: 733  LFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLV-- 790

Query: 1093 RMPDPXXXXXXXXTEHLLPC---------------LEHLNIGHCDSFTKVPDLPPSLQIL 1137
            ++P            HLL C               LE LN+  C S  K+P +       
Sbjct: 791  QLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSI------- 843

Query: 1138 HMYNCPNVRFLSGKLDALDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGP 1197
                        G +  L SLY+SDC +L  L   + N  +L +L +  C +L+ LP   
Sbjct: 844  ------------GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSI 891

Query: 1198 GAYSSLETLEIKYCPAMKSLPGRLQQRLDSLEEKDLSNMRSSDPWEGIHSAFHFSFLRAV 1257
               ++L++L +  C ++K LP  ++   +++  + LS M+ S   E   S +  S L  +
Sbjct: 892  WNITNLQSLYLNGCSSLKELPSLVE---NAINLQSLSLMKCSSLVELPSSIWRISNLSYL 948

Query: 1258 D 1258
            D
Sbjct: 949  D 949

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 1113 LEHLNIGHCDSFTKVPDLPPS--LQILHMYNCPNVRFLS---GKLDALDSLYISDCKNLR 1167
            L+ +++  C +  ++PD   +  LQ L + NC ++  L    G    L  L + DC +L 
Sbjct: 659  LKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLV 718

Query: 1168 SLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRL 1221
             L   +GNL +L  L + RC SLV LP   G  +SL+ L +  C ++  +P  +
Sbjct: 719  KLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSI 772
>AT5G45200.1 | chr5:18283967-18290332 REVERSE LENGTH=1262
          Length = 1261

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 23/205 (11%)

Query: 1017 MPVDGEPIQGIGQLLPRLKFLGIRNCQELTEIFNLPWSLKTIDIYRCPRLKSIYGKQEDS 1076
            +P++ +P   I   LP  +   I   +E  +  NL W    +D+    +L S+ G     
Sbjct: 632  LPINFDPKNLIDLKLPYSQIEQI--WEEEKDTSNLQW----LDLNHSSKLHSLSGLSRAQ 685

Query: 1077 ESGSAHAEQLTTLLSKRMPDPXXXXXXXXTEHLLPCLEHLNIGHCDSFTKVPDLP-PSLQ 1135
            +  S + E  T L  K +P              +  L  LN+  C S   +PD+    L+
Sbjct: 686  KLQSINLEGCTGL--KTLPQVLQN---------MESLMFLNLRGCTSLESLPDITLVGLR 734

Query: 1136 ILHMYNCPNVRFLSGKLDA--LDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSL 1193
             L + NC   RF   KL A  L+ LY+ D   ++ L   +G+L  L SL +  CK+L+SL
Sbjct: 735  TLILSNCS--RFKEFKLIAKNLEELYL-DGTAIKELPSTIGDLQKLISLKLKDCKNLLSL 791

Query: 1194 PDGPGAYSSLETLEIKYCPAMKSLP 1218
            PD  G   +++ + +  C +++S P
Sbjct: 792  PDSIGNLKAIQEIILSGCSSLESFP 816
>AT3G04220.1 | chr3:1109118-1112188 REVERSE LENGTH=868
          Length = 867

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 1113 LEHLNIGHCDSFTKVPDL---PPSLQILHMYNCPNVRFLS---GKLDALDSLYISDCKNL 1166
            L+ L+I  C S  K+P       +L+ +++  C ++  L    G L  L  L + +C +L
Sbjct: 693  LQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSL 752

Query: 1167 RSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLP 1218
              L    GNL ++ SL  Y C SLV LP   G  ++L  L ++ C +M  LP
Sbjct: 753  VELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELP 804

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 218/537 (40%), Gaps = 96/537 (17%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWV-----------CVSDEFD 239
           ++++++  + I G  G+GKTT A+ +YN  Q  + FQL+ ++           C  D ++
Sbjct: 253 IDSDEMKTIGIWGPPGVGKTTIARSLYN--QHSDKFQLSVFMESIKTAYTIPACSDDYYE 310

Query: 240 LSKIASK-ISMTTNEKDCD-NVLQKLQQEVSGKRFLLVLDDV-WNRDVDKWSKLKTCLQQ 296
             ++  + +S  TN+++     L   Q+ ++ K+ L+V+DDV  +  VD  +K    L  
Sbjct: 311 KLQLQQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDALAKENDWL-- 368

Query: 297 GAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKK--EKPSELVDM 354
              GS I+ TT+   + +  G    + +   +     +I    AF  K   +   EL   
Sbjct: 369 -GPGSRIIITTQDRGILRAHGIEHIYEVDYPNYEEALQIFCMHAFGQKSPYDGFEELAQQ 427

Query: 355 VDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPS 414
           V     R    PL  + +GS      T +EW   L + V    D  I  ILKLSYD    
Sbjct: 428 VTTLSGRL---PLGLKVMGSYFRG-MTKQEWTMALPR-VRTHLDGKIESILKLSYD---- 478

Query: 415 QMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQD 474
                 A C         DV+  + L +A  F   +  +  +++G + F++L  R     
Sbjct: 479 ------ALC---------DVDKSLFLHLACSFHNDDTELVEQQLGKK-FSDL--RQGLHV 520

Query: 475 VDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDS---- 530
           + E SL  M  R          ++H L+  +   ++R++ +     P   Q L D+    
Sbjct: 521 LAEKSLIHMDLR--------LIRMHVLLAQLGREIVRKQSIH---EPGQRQFLVDATDIR 569

Query: 531 --------SRHLFSSYHRMNTL---LDAFIEKRILPLRTVMFFG-HLDGFPQHLLKYNSL 578
                   SR +       NT+   LD   EK    +  + F   + D F +H + Y   
Sbjct: 570 EVLTDDTGSRSVIGIDFDFNTMEKELD-ISEKAFRGMSNLQFIRIYGDLFSRHGVYYFGG 628

Query: 579 RA----------LCIPN----FRGRPCLIQA-----KHLHHLRYLNLSHSWNMERLPEEI 619
           R           L  P       G+   ++      + L +L +L+L+ S N++ LP ++
Sbjct: 629 RGHRVSLDYDSKLHFPRGLDYLPGKLSKLEKLWEGIQPLRNLEWLDLTCSRNLKELP-DL 687

Query: 620 SILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVTALQTL 676
           S   NLQ             P ++   T+L+ +  + C  L  +P     +T LQ L
Sbjct: 688 STATNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQEL 744

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 1113 LEHLNIGHCDSFTKVPDL---PPSLQILHMYNCPNVRFLS---GKLDALDSLYISDCKNL 1166
            L+ +N+  C S  ++P       +LQ L +  C ++  L    G L  ++SL   +C +L
Sbjct: 717  LKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYECSSL 776

Query: 1167 RSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRLQQRLD 1226
              L    GNL +L  L +  C S+V LP   G  ++L+ L ++ C  +  LP      L 
Sbjct: 777  VKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVN-LT 835

Query: 1227 SLEEKDLSNMRSSDP 1241
            +LE  DL +  S  P
Sbjct: 836  NLENLDLRDCSSLLP 850
>AT5G41750.1 | chr5:16694047-16697527 FORWARD LENGTH=1069
          Length = 1068

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 112/520 (21%), Positives = 217/520 (41%), Gaps = 71/520 (13%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNE---------------PQIKEHFQLNRWVCVS 235
           LE++++ ++ I G  G+GKTT A+ ++N+                 IK   +    + + 
Sbjct: 202 LESDEVKMIGIWGPAGIGKTTIARTLFNKISSIFPFKCFMENLKGSIKGGAEHYSKLSLQ 261

Query: 236 DEFDLSKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQ 295
            +  LS+I  + +M  +       L  ++Q +  ++ L++LDDV   D+++   L     
Sbjct: 262 KQL-LSEILKQENMKIHH------LGTIKQWLHDQKVLIILDDV--DDLEQLEVLAEDPS 312

Query: 296 QGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
              +GS I+ TT    + +       +++         EI+   AF  +   P    ++ 
Sbjct: 313 WFGSGSRIIVTTEDKNILKAHRIQDIYHVDFPSEEEALEILCLSAFK-QSSIPDGFEELA 371

Query: 356 DKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQ 415
           +K  + C   PL    VG+ L  K+   EW  LLS+ +    D  I  IL++ YD L ++
Sbjct: 372 NKVAELCGNLPLGLCVVGASLRRKSK-NEWERLLSR-IESSLDKNIDNILRIGYDRLSTE 429

Query: 416 MKLCFAFCAIFPKDYEIDVEMLV----KLWMANDF----------IPSENGVG-----LE 456
            +  F   A F  + ++D    +    KL + N F          I ++  V      L+
Sbjct: 430 DQSLFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRISTDGHVVMHHYLLQ 489

Query: 457 KVGNRIF-----NELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMR 511
           K+G RI      NE  +R F  + +E        RD L +   T  +  +  D +     
Sbjct: 490 KLGRRIVHEQWPNEPGKRQFLIEAEEI-------RDVLTKGTGTESVKGISFDTSNI--- 539

Query: 512 EECVTVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQH 571
           EE     G    ++ L+   R    S++   TL      + I P+R +    H   +P+ 
Sbjct: 540 EEVSVGKGAFEGMRNLQ-FLRIYRDSFNSEGTLQIPEDMEYIPPVRLL----HWQNYPRK 594

Query: 572 LL--KYN--SLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQT 627
            L  ++N   L  + +P+ + +      + L +L+ +++S S++++ +P  +S   NL+ 
Sbjct: 595 SLPQRFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIP-NLSKATNLEI 653

Query: 628 XXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPEL 667
                       P ++  +  L  L  + C+ L+ +P  +
Sbjct: 654 LSLEFCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNI 693
>AT3G44630.3 | chr3:16196292-16200410 FORWARD LENGTH=1241
          Length = 1240

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 27/250 (10%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVC---------VSDEFD-- 239
           L+ +++ ++ I G  G+GKTT A+ + N  Q+ + FQL+  +            DE+   
Sbjct: 284 LDLDEVRIIGIWGPPGIGKTTIARFLLN--QVSDRFQLSAIMVNIKGCYPRPCFDEYSAQ 341

Query: 240 LSKIASKISMTTNEKDC-DNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG- 297
           L      +S   N KD   + L   Q+ +  K+  LVLD     +VD+  +L    ++  
Sbjct: 342 LQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLD-----EVDQLGQLDALAKETR 396

Query: 298 --AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMV 355
               GS I+ TT    V +  G    + +    N   ++I    AF   +++P E  D +
Sbjct: 397 WFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAF--GQKQPHEGFDEI 454

Query: 356 DKFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPS 414
              V    G  PL  + +GS L  K+ P EW   L + +    D  I  I++ SYD L  
Sbjct: 455 AWEVKALAGKLPLGLKVLGSALRGKSKP-EWERTLPR-LRTSLDGKIGGIIQFSYDALCD 512

Query: 415 QMKLCFAFCA 424
           + K  F + A
Sbjct: 513 EDKYLFLYIA 522
>AT5G66910.1 | chr5:26718338-26721133 REVERSE LENGTH=816
          Length = 815

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 28/270 (10%)

Query: 188 RSLLENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKI 247
           + LL+N+   V+ + G  G GKTT    + ++P+I+  F+   +  VS+  +   I   +
Sbjct: 184 KKLLDNS---VVVVSGPPGCGKTTLVTKLCDDPEIEGEFKKIFYSVVSNTPNFRAIVQNL 240

Query: 248 SMTT--------NEKDCDNVLQKLQQEVSGK-RFLLVLDDVWNRDVDKWSKLKTCLQQGA 298
                       ++   +  L+ L +E++   R LLVLDDVW        K +  L    
Sbjct: 241 LQDNGCGAITFDDDSQAETGLRDLLEELTKDGRILLVLDDVWQGSEFLLRKFQIDLPDYK 300

Query: 299 AGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKF 358
               IL T++             ++L  L   +   ++ + A       P E  D++ K 
Sbjct: 301 ----ILVTSQF----DFTSLWPTYHLVPLKYEYARSLLIQWASPPLHTSPDEYEDLLQKI 352

Query: 359 VDRCVGSPLAARAVGSVLSN------KTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDL 412
           + RC G PL    VG  L        K   + W+    ++++ + +  +   L+ S++ L
Sbjct: 353 LKRCNGFPLVIEVVGISLKGQALYLWKGQVESWSE--GETILGNANPTVRQRLQPSFNVL 410

Query: 413 PSQMKLCFAFCAIFPKDYEIDVEMLVKLWM 442
              +K CF     F +D +I   +++ +WM
Sbjct: 411 KPHLKECFMDMGSFLQDQKIRASLIIDIWM 440
>AT4G12010.1 | chr4:7197325-7201393 REVERSE LENGTH=1220
          Length = 1219

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 22/250 (8%)

Query: 196 IMVLPIVGMGGLGKTTFAKLIYN--EPQIKEHFQLNRWVCVSDEFDLSKIASKI-SMTTN 252
           + ++ IVGM G+GKTT A  +Y     Q      L      S    L  +  K+ S   N
Sbjct: 209 VHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIRENSGRSGLESLLQKLFSTVLN 268

Query: 253 EKDCD-----NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTT 307
           ++D +     N  ++ ++ +  KR L+VLDDV +    ++        QG  GS I+ TT
Sbjct: 269 DRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHCKWYQG--GSRIIITT 326

Query: 308 RLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKP-SELVDMVDKFVDRCVGSP 366
           R +++ + +   + + L  L++R   ++    AF      P  E   + +  +D   G P
Sbjct: 327 RDSKLIETIKG-RKYVLPKLNDREALKLFSLNAF--SNSFPLKEFEGLTNMVLDYAKGHP 383

Query: 367 LAARAVGSVLSNKTT---PKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCFAFC 423
           LA + +GS L  +       + + L S+S        I  +L+ SY++L ++ K  F   
Sbjct: 384 LALKVLGSDLCERDDLYWEAKLDRLKSRS-----HGDIYEVLETSYEELTTEQKNVFLDI 438

Query: 424 AIFPKDYEID 433
           A F +   +D
Sbjct: 439 ACFFRSENVD 448
>AT5G45440.1 | chr5:18412426-18413466 REVERSE LENGTH=347
          Length = 346

 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 57/227 (25%)

Query: 199 LPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVC------------------------- 233
           L +VG  G+GKT   + I+N+  ++  +    WV                          
Sbjct: 81  LVVVGEYGVGKTALCQQIFNDYDVRNAYAPRIWVSMHSNESKEGLDGKICVLKTILKGLG 140

Query: 234 ------------VSDEFDLSKIASKI-SMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDV- 279
                       V +E    + A +I   T  EK+   +L  L   +  K++L+V DDV 
Sbjct: 141 VEESMFESIHREVVEEVSNRQEAGEIDGETAKEKEISALLYALHLNLRWKKYLIVFDDVQ 200

Query: 280 ----WNRDVD-------KWSK-LKTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTL 327
               W+  +D       KW K L     +G+ G VI TT R   +A+ +  VQ H +  L
Sbjct: 201 EIDNWDEKLDAKLNEGEKWGKYLSDGFPKGSGGRVIYTT-RDENLAKNL-VVQKHEIHRL 258

Query: 328 ----DNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAAR 370
               D+  +W+I E      +KE P      +D+ +++  G PLAAR
Sbjct: 259 WPLSDSNSVWKIYEAMIQKREKESPRNDKKCIDELMNKSRGLPLAAR 305
>AT2G14080.1 | chr2:5925225-5929600 FORWARD LENGTH=1216
          Length = 1215

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 131/567 (23%), Positives = 224/567 (39%), Gaps = 115/567 (20%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRW----------VCVSDEFDL 240
           L++ ++ ++ I G  G+GKTT  + +YN  Q+   F+L+ +          +  SD++  
Sbjct: 246 LDSCEVRMIGIWGPPGIGKTTIVRFLYN--QLSSSFELSIFMENIKTMHTILASSDDYSA 303

Query: 241 SKIASK--ISMTTNEKDCD-NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG 297
             I  +  +S   + KD +   L+ LQ+ +  K+ L+VLDDV ++ V   +  K     G
Sbjct: 304 KLILQRQFLSKILDHKDIEIPHLRVLQERLYNKKVLVVLDDV-DQSVQLDALAKETRWFG 362

Query: 298 AAGSVILTTT-RLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVD 356
               +++TT  R    A  +  +   +L   D+    +I    AF   ++ P +    + 
Sbjct: 363 PRSRILITTQDRKLLKAHRINNIYKVDLPNSDDAL--QIFCMYAF--GQKTPYDGFYKLA 418

Query: 357 KFVDRCVGS-PLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQ 415
           + V   VG+ PL  R VGS    + + +EW   + + +    D  I  +LK SYD L  +
Sbjct: 419 RKVTWLVGNFPLGLRVVGSYF-REMSKQEWRKEIPR-LRARLDGKIESVLKFSYDALCDE 476

Query: 416 MKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRSFFQDV 475
            K  F   A F     I+                     LE    + F ++A+R  F  +
Sbjct: 477 DKDLFLHIACFFNHESIE--------------------KLEDFLGKTFLDIAQR--FHVL 514

Query: 476 DETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNSIQLLKDS----- 530
            E SL  +             ++HD +  +   ++R++ V     P   Q L D+     
Sbjct: 515 AEKSLISIN--------SNFVEMHDSLAQLGKEIVRKQSVR---EPGQRQFLVDARDISE 563

Query: 531 --------SRHLFSSY---HRMNTLLD----AFIEKRILPLRTVMFFGHLDGFPQ----- 570
                    R +   Y   HR + + +    AF     L    V  FG+L  FP      
Sbjct: 564 VLADDTAGGRSVIGIYLDLHRNDDVFNISEKAFEGMSNLQFLRVKNFGNL--FPAIVCLP 621

Query: 571 HLLKYNS--LRAL--------CIPNFRGRPCLI--------------QAKHLHHLRYLNL 606
           H L Y S  LR L        C P+      L+              + + L +L+ ++L
Sbjct: 622 HCLTYISRKLRLLDWMYFPMTCFPSKFNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDL 681

Query: 607 SHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPE 666
             S N++ LP ++S   NL+             P ++   T L  L   GC+ L  +P  
Sbjct: 682 FSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSS 740

Query: 667 LRKVTALQTLTYFVVGNSSDCSNVGEI 693
           +     LQT+ +      S C N+ E+
Sbjct: 741 IGNAINLQTIDF------SHCENLVEL 761

 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 5/114 (4%)

Query: 1113 LEHLNIGHCDSFTKVPDLPPS--LQILHMYNCPNVR---FLSGKLDALDSLYISDCKNLR 1167
            L+ +++    +  ++PDL  +  L++L++  C ++    F  G    L  L +S C +L 
Sbjct: 676  LKRMDLFSSKNLKELPDLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLL 735

Query: 1168 SLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPGRL 1221
             L   +GN  +L ++    C++LV LP   G  ++L+ L++  C ++K LP  +
Sbjct: 736  ELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSI 789
>AT5G48780.1 | chr5:19777511-19779604 FORWARD LENGTH=670
          Length = 669

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 22/263 (8%)

Query: 138 VLVAEMNAFGFKYQRQSLASKQWRQTDSIIDYSEKDIVERSRETEKQKIVRSLLENNDIM 197
           V+  E N+    Y+  S+      Q  S    S +D+V  +   +    +  L  + ++ 
Sbjct: 406 VINPEKNSLDGLYEYSSIMETFSSQPISSTTRSFEDLVGMNHRMQALSALLELESDKEVR 465

Query: 198 VLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWV---------CVSDEFDLSKIASKIS 248
           V+ I G GG+GKTT ++  Y   +I + F  + ++         C+ + F    I  +  
Sbjct: 466 VVGIWGTGGIGKTTLSRYAYE--RISQQFHTHAFLENAQESSSSCLEERFLSKAIQREAL 523

Query: 249 MTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWN-RDVDKWSKLKTCLQQGAAGSVILTTT 307
              N KDC  +++ L Q    ++ LL++DDV N + +++  K+ + L     GS ++ T 
Sbjct: 524 AVRNSKDCPEIMKSLIQH---RKVLLIVDDVDNVKTLEEVFKITSWL---VPGSRVIVTA 577

Query: 308 RLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGS-P 366
           R        G      +  L  RF   +     F  K++ P      +     + VG  P
Sbjct: 578 RDESFLLASGVKYIFEVKGL--RFDQALQLFYQFAFKQKSPPVRFRQLSVRAIKLVGFLP 635

Query: 367 LAARAVGSVLSNKTTPKEWNTLL 389
           LA +  GS+L  K     W T+L
Sbjct: 636 LALKVTGSMLYRKKESY-WETIL 657
>AT4G19520.1 | chr4:10639488-10647070 REVERSE LENGTH=1745
          Length = 1744

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 121/300 (40%), Gaps = 49/300 (16%)

Query: 196 IMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKISMTTNEKD 255
           I  L I GM G+GKTT A+  Y+  Q+   F+ +   C  ++FD  +   K      EK 
Sbjct: 190 IRSLGIWGMAGIGKTTLARAAYD--QLSRDFEAS---CFIEDFD-REFQEKGFFGLLEKQ 243

Query: 256 CD-----NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLA 310
                    L  L + +  KR LLVLDDV  R     +           GS+I+ T++  
Sbjct: 244 LGVNPQVTRLSILLKTLRSKRILLVLDDV--RKPLGATSFLCEFDWLGPGSLIIVTSQDK 301

Query: 311 EVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSE-LVDMVDKFVDRCVGSPLAA 369
           +V       + + +  L+     ++  R AF   K+ P + L+++  KFVD   G+PLA 
Sbjct: 302 QVLVQCQVNEIYKVQGLNKHESLQLFSRCAF--GKDVPDQNLLELSMKFVDYANGNPLAL 359

Query: 370 RAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCF--------- 420
              G  L  KT     + +L       D   I   LK SYD L    K  F         
Sbjct: 360 SICGKNLKGKTPLDMKSVVLELKRHLSDK--IFVKLKSSYDALSVSEKEIFLDIVFTFRG 417

Query: 421 ----------AFCAIFPKDYEIDVEMLVKLWMANDFIP-SENGVGLEK----VGNRIFNE 465
                     A C  FP+   + +E LV       F+  SEN V +      VG +I N+
Sbjct: 418 ANVDNVMQSLAGCGFFPR---VGIEALVD----KSFVTVSENRVQVNNLIYDVGLKIIND 470
>AT4G16950.1 | chr4:9539010-9544340 REVERSE LENGTH=1450
          Length = 1449

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 1106 TEHLLPCLEHLNIGHCDSFTKVPDLPPSLQILHMYNCPNVRFLS-GKLDALDSLYISDCK 1164
            T+  L  LE L++  C S    P +  S++ L++ N      L   K   L+SL +++CK
Sbjct: 981  TDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNNCK 1040

Query: 1165 NLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLP 1218
            +L +L   +GNL +L  L + RC  L  LP      SSL  L++  C ++++ P
Sbjct: 1041 SLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVN-LSSLGILDLSGCSSLRTFP 1093
>AT4G16920.1 | chr4:9519173-9525691 REVERSE LENGTH=1305
          Length = 1304

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 1106 TEHLLPCLEHLNIGHCDSFTKVPDLPPSLQILHMYNCPNVRFLS-GKLDALDSLYISDCK 1164
            T+  L  LE L++  C S    P +  S++ L++ N      L   K   L+SL +++CK
Sbjct: 975  TDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNNCK 1034

Query: 1165 NLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLP 1218
            +L +L   +GNL +L  L + RC  L  LP      SSL  L++  C ++++ P
Sbjct: 1035 SLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVN-LSSLGILDLSGCSSLRTFP 1087
>AT5G66900.1 | chr5:26714931-26717757 REVERSE LENGTH=810
          Length = 809

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 25/267 (9%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKI--- 247
           L ++ ++ L +    G GKTT    + ++P IK  F+   +  VS+  +   I   +   
Sbjct: 182 LLDDSVVTLVVSAPPGCGKTTLVSRLCDDPDIKGKFKHIFFNVVSNTPNFRVIVQNLLQH 241

Query: 248 ----SMT-TNEKDCDNVLQKLQQEV-SGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGS 301
               ++T  N+   +  L+KL +E+      LLVLDDVW R  D + +     Q      
Sbjct: 242 NGYNALTFENDSQAEVGLRKLLEELKENGPILLVLDDVW-RGADSFLQK---FQIKLPNY 297

Query: 302 VILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDR 361
            IL T+R  +        +   L   D R L      R        P E  D++ K + R
Sbjct: 298 KILVTSRF-DFPSFDSNYRLKPLEDDDARALLIHWASRPC---NTSPDEYEDLLQKILKR 353

Query: 362 CVGSPLAARAVGSVLSNKT------TPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQ 415
           C G P+    VG  L  ++        + W+    + ++      +L  L+ S+D L   
Sbjct: 354 CNGFPIVIEVVGVSLKGRSLNTWKGQVESWSE--GEKILGKPYPTVLECLQPSFDALDPN 411

Query: 416 MKLCFAFCAIFPKDYEIDVEMLVKLWM 442
           +K CF     F +D +I   +++ +W+
Sbjct: 412 LKECFLDMGSFLEDQKIRASVIIDMWV 438
>AT5G36930.2 | chr5:14567771-14571916 REVERSE LENGTH=1192
          Length = 1191

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 149/693 (21%), Positives = 261/693 (37%), Gaps = 101/693 (14%)

Query: 187 VRSLLE--NNDIMVLPIVGMGGLGKTTFAKLIYNE--------------------PQIKE 224
           + SLL   ++ + V+ I GMGG+GKTT AK+ +NE                    P+ + 
Sbjct: 201 ISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRT 260

Query: 225 HFQLNRWVCVSDEFDLSKIASKISMTTNEKDCDNVLQKLQQEVSGKR-FLLVLDDVWNRD 283
           H Q              ++ S I +  N+ +   +   +++    KR  L+V D      
Sbjct: 261 HLQ-------------HQLLSDI-LRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQ 306

Query: 284 VDKWSKLKTCLQQGAAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYL 343
           ++  +  + C      GS I+ TTR   + + +    +++   LD     E+    AF  
Sbjct: 307 LNSAAIDRDCF---GHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFR- 362

Query: 344 KKEKPSELVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILP 403
             E P E +   ++ V  C G PLA   +G+ L  ++  +EW + L       +D+ I  
Sbjct: 363 TSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIERSI-REWESTLKLLKRIPNDN-IQA 420

Query: 404 ILKLSYDDLPSQMKLCF--AFCAIFPKDYEIDVEMLVKLWMANDFIPS---ENGVGLEKV 458
            L++S++ L  + K  F    C     D      +L    +  D + S   E  +     
Sbjct: 421 KLQISFNALTIEQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISG 480

Query: 459 GNRIFNELARRSFFQDVDETSLFKMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVM 518
            N + ++L R    Q V E S  K   R +L             H+  + V++++  T  
Sbjct: 481 NNIMMHDLLRDMGRQIVREISPKKCGERSRLWS-----------HNDVVGVLKKKSGT-- 527

Query: 519 GRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQHL--LKYN 576
              N+I+ L   +  +   Y  +        E R+L LR V   G  + FP+ L  L ++
Sbjct: 528 ---NAIEGLSLKADVMDFQYFEVEAFA-KMQELRLLELRYVDLNGSYEHFPKDLRWLCWH 583

Query: 577 SLRALCIPNFRGRPCL----IQAKHL-------------HHLRYLNLSHSWNMERLPEEI 619
                C P       L    +Q  +L             + ++YL+LSHS  +   P + 
Sbjct: 584 GFSLECFPINLSLESLAALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETP-DF 642

Query: 620 SILYNLQTXXXXXXXXXXXXPKNMKYM-TSLRHLYTQGCTDLECMPPELRKVTALQTLTY 678
           S   N++              K++  +   L  L    C +L+ +P E+ K+ +L++L  
Sbjct: 643 SYFPNVEKLILINCKSLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFL 702

Query: 679 FVVGNSSDCSNVGEIHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLTHLCFK-----W 733
                 S+CS +  + D                              L  L         
Sbjct: 703 ------SNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLL 756

Query: 734 SNDIEKDPEHYQNVLGALRP--HAKLQLLKVQSFKGTNFPTWMT--DVCTFMNLTEIHLV 789
           S+DI+       + +  LRP   + L  +++ S    N    +   D+ +   L ++ L 
Sbjct: 757 SDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLR 816

Query: 790 DCPLCKEIPKFWKLPALEVLHLTGLNKLQSLCS 822
               C     F  LP L  L L+  +KLQS+ S
Sbjct: 817 GNSFCNLPTDFATLPNLGELLLSDCSKLQSILS 849
>AT5G48770.1 | chr5:19773277-19777242 REVERSE LENGTH=1191
          Length = 1190

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 42/263 (15%)

Query: 187 VRSLLENN---DIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKI 243
           +R LL+ +   ++ ++ I GMGG+GKTT AK +Y   Q+   F  + ++      D+ +I
Sbjct: 196 IRPLLKKDFDAEVCMVGIWGMGGIGKTTIAKYLYE--QLASQFPAHSFI-----EDVGQI 248

Query: 244 ASKISMTTNEKD--CD-------------NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWS 288
             K+ +   ++   CD             N    ++  +   + L VLD      VDK  
Sbjct: 249 CKKVDLKCIQQQLLCDILSTKRVALMSIQNGANLIRSRLGTLKVLFVLD-----GVDKVE 303

Query: 289 KLKTCLQQGA---AGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKK 345
           +L    ++ +    GS I+ TTR   +         + +  L N    +I++  AF    
Sbjct: 304 QLHALAKEASWFGPGSRIIITTRDRRLLDSCRVTNKYEVKCLQNEDSLKIVKNIAF--AG 361

Query: 346 EKPSELVDMVDKFVDRCV----GSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGI 401
             P+  +D  ++F  R      G PLA  A GS L   T+  EW   +  ++       I
Sbjct: 362 GVPT--LDGYERFAIRASQLAQGLPLALVAFGSFLRGATSIDEWEDAID-TLETAPHQNI 418

Query: 402 LPILKLSYDDLPSQMKLCFAFCA 424
           + IL+ SY +L  + K  F   A
Sbjct: 419 MDILRSSYTNLDLRDKTIFIRVA 441
>AT4G16960.1 | chr4:9546343-9551007 REVERSE LENGTH=1042
          Length = 1041

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 107/250 (42%), Gaps = 35/250 (14%)

Query: 974  CKYLQKLEIKSCDVLIHWPQREFQSLESLNELTVESCKNLKGIMPVDGEPIQGIGQLLPR 1033
             +YL +L + + D+   W     Q L SL ++ + + K LK I      P       L R
Sbjct: 584  AEYLVELRMVNSDLEKLW--NGTQLLGSLKKMILRNSKYLKEI------PDLSYAMNLER 635

Query: 1034 LKFLGIRNCQELTEIFNLPW---SLKTIDIYRCPRLKSIYGKQEDSESGSAHAEQLTTLL 1090
            L    I +C E+ E F  P    SL+ +D+ RCP+L++               +    L 
Sbjct: 636  LD---ISDC-EVLESFPSPLNSESLEYLDLLRCPKLRNFPETIMQISPYGIDIDVADCLW 691

Query: 1091 SKRMP--DPXXXXXXXXTEHLLPCLEHLNIGHCDSFTKVPDLPPSLQILHMYNCPNVRFL 1148
            +K +P  D             LP  EHL          +  L   +Q L           
Sbjct: 692  NKSLPGLDYLDCLRRCNPSKFLP--EHLVNLKLRGNNMLEKLWEGVQSL----------- 738

Query: 1149 SGKLDALDSLYISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEI 1208
             GKL+ +D   +S+C+NL  + P L    +L +L++  CKSLV+LP   G +  L TLE+
Sbjct: 739  -GKLERMD---LSECENLIEI-PDLSKATNLVNLNLSNCKSLVTLPSTIGNHQKLYTLEM 793

Query: 1209 KYCPAMKSLP 1218
            K C  +K LP
Sbjct: 794  KECTGLKVLP 803
>AT5G11250.1 | chr5:3587978-3591960 REVERSE LENGTH=1190
          Length = 1189

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 20/257 (7%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWV----------CVSDEFDL 240
           L+ +++ ++ I G  G+GKTT A+++YN  Q+   FQL+ ++            SD++  
Sbjct: 252 LDTDEVRIIGIWGPPGIGKTTIARVVYN--QLSHSFQLSVFMENIKANYTRPTGSDDYSA 309

Query: 241 SKIASKISMT--TNEKDCD-NVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQG 297
                ++ M+  T +KD +   L   Q  +  K+ L+VLD V N+ V   +  K     G
Sbjct: 310 KLQLQQMFMSQITKQKDIEIPHLGVAQDRLKDKKVLVVLDGV-NQSVQLDAMAKEAWWFG 368

Query: 298 AAGSVILTTTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDK 357
             GS I+ TT+  ++ +  G    + +         +I    AF     K     ++  K
Sbjct: 369 -PGSRIIITTQDQKLFRAHGINHIYKVDFPPTEEALQIFCMYAFGQNSPKDG-FQNLAWK 426

Query: 358 FVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMK 417
            ++     PL  R +GS     +  +EW   L + +    D+ I  ILK SYD L  + K
Sbjct: 427 VINLAGNLPLGLRIMGSYFRGMSR-EEWKKSLPR-LESSLDADIQSILKFSYDALDDEDK 484

Query: 418 LCFAFCAIFPKDYEIDV 434
             F   A F    EI +
Sbjct: 485 NLFLHIACFFNGKEIKI 501
>AT5G38850.1 | chr5:15555187-15558430 FORWARD LENGTH=987
          Length = 986

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 49/316 (15%)

Query: 157 SKQWRQTDSIIDYSEKDIVERSRETEKQKI---------VRSL-----LENNDIMVLPIV 202
           S +W     +I+   KD+ ++   T  +           +R L     L+   + ++ I 
Sbjct: 146 SLKWENEADMIEKIAKDVSDKLNATPSKDFDAFVGLEFHIRELSSLLYLDYEQVRIVGIC 205

Query: 203 GMGGLGKTTFAKLIYNEPQIKEHFQLNRWV--------CVSDEFDL---------SKIAS 245
           G  G+GKTT A+ +  +  +  +FQ + ++           DE+ L         SKI +
Sbjct: 206 GPAGIGKTTIARAL--QSLLSSNFQRSCFMENVRGSLNIGLDEYGLKLDLQERLLSKIMN 263

Query: 246 KISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILT 305
           +  M          L  ++  +  ++ L++LDDV + D+   +   T       GS I+ 
Sbjct: 264 QKGMRIEH------LGTIRDRLHDQKVLIILDDVNDLDLYALADQTTWF---GPGSRIIV 314

Query: 306 TTRLAEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGS 365
           TT   E+ Q       +++     +   EI  R AF  +   P  ++ + ++  + C   
Sbjct: 315 TTEDNELLQKHDINNVYHVDFPSRKEALEIFCRCAFR-QSSAPDTILKLAERVTELCGNL 373

Query: 366 PLAARAVGSVLSNKTTPKEWNTLLSK-SVIFDDDSGILPILKLSYDDLPSQMKLCFAFCA 424
           PL    +GS L  KT   EW  L+ +  +  D D+     L++ YD L    +  F   A
Sbjct: 374 PLGLCVIGSSLHGKTE-DEWEILIRRLEISLDRDNE--AQLRVGYDSLHENEQALFLSIA 430

Query: 425 IF--PKDYEIDVEMLV 438
           +F   KD ++ + ML+
Sbjct: 431 VFFNYKDRQLVMAMLL 446
>AT5G41540.1 | chr5:16612659-16616063 REVERSE LENGTH=1039
          Length = 1038

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 115/525 (21%), Positives = 216/525 (41%), Gaps = 71/525 (13%)

Query: 191 LENNDIMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWV---------CVSDEFDL- 240
           L ++++ ++ I G  G+GKTT A+ +YN  Q+  +FQ   ++            D +D  
Sbjct: 200 LNSDEVKMIGIWGPAGIGKTTIARALYN--QLSTNFQFKCFMGNLKGSYKSIGVDNYDWK 257

Query: 241 ----SKIASKISMTTNEKDCDNVLQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQ 296
               +++ SKI +  N+   D+ L  ++  +  K+ L+V+DDV   D+++   L      
Sbjct: 258 LNLQNQLLSKI-LNQNDVKTDH-LGGIKDWLEDKKVLIVIDDV--DDLEQLLALAKEPSW 313

Query: 297 GAAGSVILTTTRLAEVAQIMGTVQAHNLTTLD---NRFLWEIIERRAFYLKKEKPSE-LV 352
             +GS I+ TT+   + + +  V  +N   +    N+   EI+   AF  +K  P +   
Sbjct: 314 FGSGSRIIVTTKDKTIMKTL-LVNDNNFYHVGYPTNKVALEILCLSAF--QKSFPRDGFE 370

Query: 353 DMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDL 412
           ++  K    C   PL    VGS L  ++  + W  L S  +    D  I  +LK +Y+ L
Sbjct: 371 ELARKVAYLCGNLPLCLSVVGSSLRGQSKHR-WK-LQSDRLETSLDRKIEDVLKSAYEKL 428

Query: 413 PSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENG---------VGLEKVGNRIF 463
             + ++ F   A F  +  I V   VK  +A+  +   NG         V + +V +RIF
Sbjct: 429 SKKEQVLFLHIACFFNNTYISV---VKTLLADSNLDVRNGLKTLADKCLVHISRV-DRIF 484

Query: 464 -----NELARRSFFQDVDETSLFKMYR-----RDKLCQFRKTCKIHDL---MHDIALYVM 510
                 +L R    +  DE    +        RD L     T  +  +   M  ++ + +
Sbjct: 485 MHPLLQQLGRYIVLEQSDEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSEFSI 544

Query: 511 REECVTVMGRPNSIQLLKDSSRHLFSSYHRMNTLLDAFIEKRILPLRTVMFFGHLDGFPQ 570
                  M     +++ + SS             L    + + LP   ++   H + +P+
Sbjct: 545 SGRAFEAMRNLRFLRIYRRSSSK--------KVTLRIVEDMKYLPRLRLL---HWEHYPR 593

Query: 571 HLL----KYNSLRALCIPNFRGRPCLIQAKHLHHLRYLNLSHSWNMERLPEEISILYNLQ 626
             L    +   L  L +P+          + L +L+ ++LS S  ++ +P  +S   NL+
Sbjct: 594 KSLPRRFQPERLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIP-NLSNATNLE 652

Query: 627 TXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTDLECMPPELRKVT 671
           T            P ++  +  L+ L   GC  L+ +P  +  V+
Sbjct: 653 TLTLIKCSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVS 697
>AT5G45260.1 | chr5:18326277-18332229 FORWARD LENGTH=1289
          Length = 1288

 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 118/292 (40%), Gaps = 31/292 (10%)

Query: 196 IMVLPIVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASKISMTTNEK- 254
           I  + I GM G+GKTT AK +++  Q+   F  +   C  +++D S     +     E+ 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFD--QMSSAFDAS---CFIEDYDKSIHEKGLYCLLEEQL 226

Query: 255 --DCDNVLQKL---QQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRL 309
               D  + KL   +  ++ KR L+VLDDV N  V +             GS+I+ T+R 
Sbjct: 227 LPGNDATIMKLSSLRDRLNSKRVLVVLDDVRNALVGE--SFLEGFDWLGPGSLIIITSRD 284

Query: 310 AEVAQIMGTVQAHNLTTLDNRFLWEIIERRAFYLKKEKPSELVDMVDKFVDRCVGSPLAA 369
            +V  + G  Q + +  L+ +   ++    A   +      L ++  + ++   G+PLA 
Sbjct: 285 KQVFCLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLAI 344

Query: 370 RAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYDDLPSQMKLCFAFCAIFPKD 429
              G  L  K    E  T   K +       I+   K +YD L    K  F   A F + 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLK-LKRRPPFKIVDAFKSTYDTLSDNEKNIFLDIACFFQG 403

Query: 430 YEIDVEMLVKLWMANDFIP---------------SENGVGLEKVGNRIFNEL 466
              +V  +++L     F P               SEN V L K+   I  E+
Sbjct: 404 E--NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREI 453
>AT5G44870.1 | chr5:18114666-18118608 FORWARD LENGTH=1171
          Length = 1170

 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 225/575 (39%), Gaps = 149/575 (25%)

Query: 201 IVGMGGLGKTTFAKLIYNEPQIKEHFQLNRWVCVSDEFDLSKIASK-------------- 246
           IVGM G+GKTT A+ +Y + + K  F+ + +       D SK+A++              
Sbjct: 281 IVGMPGIGKTTLAETLYRKWEHK--FERSMFFP-----DASKMANEHGMCWLQKRLLEEL 333

Query: 247 -------ISMTTNEKD-CDNVLQKLQQEVSGKRFLLVLDDVWNRD-----VDKWSKLKTC 293
                  I  TTNE + C +VL         K+  LV+D+V + +       KW+ +K  
Sbjct: 334 LKDTNLNIGYTTNEHEFCKDVLLL-------KKVFLVIDNVSSEEQIETLFGKWNWIKN- 385

Query: 294 LQQGAAGSVILTTTRLAEVAQIMGTVQ-AHNLTTLDNR--FLWEIIERRAFYLKKEKPSE 350
                 GS I+ T+  ++ + + G V+  + + +L++R   LW      AF L  +    
Sbjct: 386 ------GSKIVITS--SDESMLKGFVKDTYVVPSLNSRDSLLW--FTNHAFGL-DDAQGN 434

Query: 351 LVDMVDKFVDRCVGSPLAARAVGSVLSNKTTPKEWNTLLSKSVIFDDDSGILPILKLSYD 410
           LV +   F++   G+PLA  A G  L  K    +W   + K++    +  I  +L+  YD
Sbjct: 435 LVKLSKHFLNYAKGNPLALGAFGVELCGKDKA-DWEKRI-KTLTLISNKMIQDVLRRRYD 492

Query: 411 DLPSQMKLCFAFCAIFPKDYEIDVEMLVKLWMANDFIPSENGVGLEKVGNRIFNELARRS 470
           +L  + K  F   A F K                    SEN   +  V N   +E + +S
Sbjct: 493 ELTERQKDIFLDVACFFK--------------------SENESYVRHVVNSCDSE-STKS 531

Query: 471 FFQDVDETSLF-------KMYRRDKLCQFRKTCKIHDLMHDIALYVMREECVTVMGRPNS 523
           + +  D    F       ++   D LC F K      L  D  +++       +M   N+
Sbjct: 532 WDEITDLKGKFLVNISGGRVEMHDILCTFAKELASQALTEDTRVHLRLWNYQDIMWFLNN 591

Query: 524 IQLLKDSSRHLFSSYHRM--NTLLDAFIEKRILPLRTVMFFG---HLDGFPQHLLKYNSL 578
            +L  ++ R +F    ++      D  I   +  LR +  +    H +G  + + K++++
Sbjct: 592 -ELEMENVRGIFLDMSKVPEEMTFDGNIFSNMCNLRYLKIYSSVCHKEG--EGIFKFDTV 648

Query: 579 RALCIPNFRGRPCLIQAKHLHHLRY----------------------------------- 603
           R + +P       L + ++LH ++Y                                   
Sbjct: 649 REIQLP-------LDKVRYLHWMKYPWEKLPSDFNPENLVDLELPYSSIKKVWEGVKDTP 701

Query: 604 ----LNLSHSWNMERLPEEISILYNLQTXXXXXXXXXXXXPKNMKYMTSLRHLYTQGCTD 659
                NLS+S  +  L   +S   NL+             P+ M+ M SL  L  + CT 
Sbjct: 702 ILKWANLSYSSKLTNLL-GLSNAKNLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTS 760

Query: 660 LECMPPELRKVTALQTLTYFVVGNSSDCSNVGEIH 694
           L C+  +  KV++L+ L        SDCS + E  
Sbjct: 761 LTCL--QSIKVSSLKILIL------SDCSKLEEFE 787
>AT5G18350.1 | chr5:6074069-6078569 REVERSE LENGTH=1246
          Length = 1245

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 1107 EHLLP--CLEHLNIGHCDSFTKVPDL--PPSLQILHMYNCPNVRFLS---GKLDALDSLY 1159
            E +LP   L+ +++ H     ++PDL    +L+ L + +C  +  L+   GK   L  L 
Sbjct: 639  EKILPLKSLKRMDLSHSKDLKEIPDLSNATNLEELDLSSCSGLLELTDSIGKATNLKRLK 698

Query: 1160 ISDCKNLRSLGPCLGNLPSLTSLSIYRCKSLVSLPDGPGAYSSLETLEIKYCPAMKSLPG 1219
            ++ C  L+ L   +G+  +L  L ++ C+S   LP   G  ++L+ LE+  C  + +LP 
Sbjct: 699  LACCSLLKKLPSSIGDATNLQVLDLFHCESFEELPKSIGKLTNLKVLELMRCYKLVTLPN 758

Query: 1220 RLQ 1222
             ++
Sbjct: 759  SIK 761
  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 27,112,841
Number of extensions: 1140623
Number of successful extensions: 5131
Number of sequences better than 1.0e-05: 104
Number of HSP's gapped: 4831
Number of HSP's successfully gapped: 134
Length of query: 1285
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1175
Effective length of database: 8,090,809
Effective search space: 9506700575
Effective search space used: 9506700575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 118 (50.1 bits)