BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0343100 Os01g0343100|J065039P06
(737 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867 75 1e-13
AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804 74 3e-13
AT5G45460.1 | chr5:18417154-18419265 REVERSE LENGTH=704 71 3e-12
AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878 70 4e-12
AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799 70 5e-12
AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752 54 2e-07
>AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867
Length = 866
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 19 VLLSFAMQVVLFFAGRFHVHITDKFTRVLISSTYLGADIIAIYALGGLSRQEGN------ 72
V+LS +Q +L + VL+ S+YL AD A +A+G +S+ +G
Sbjct: 22 VILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADWSANFAVGLISKNQGKDLKPDD 81
Query: 73 -PQ--SIAFFWAPFLLIHLGGQDTITAFKMEDKNAWLTRSGKXXXXXXXXXXXXXNSIGR 129
PQ + WAPFLL+HLGG DTITAF +ED WL S+
Sbjct: 82 PPQDKKVMALWAPFLLLHLGGPDTITAFALEDNALWLRHVFGLVFQAIAGVYVVVMSLP- 140
Query: 130 HKELLLAGIFMFATGFIKYFTRSWSLKWGSFESIENSTIR 169
L + + +F +G IKY R+ +L S + +S I+
Sbjct: 141 -NSLWVVIVLVFVSGTIKYLERTTALYSASLDKFRDSMIQ 179
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 60/215 (27%)
Query: 542 IQDVLTADFGTALLMMHMVTEVFLRQYPG------------NHSLVDVCRKLSNYMIYLL 589
++ V D+ +LLM H+ TE+ +Q+ ++S + + +S+YM+YLL
Sbjct: 652 VRYVTKVDYDQSLLMWHIATELCYQQHEKETIPEGYDEQRKHYSNREFSKIISDYMMYLL 711
Query: 590 VNHPSMLPLNTSAISSIK------TAERMFQRR-----------TNDISDVEHYKNIHDS 632
+ P ++ + I I+ + FQRR T +I DVE I
Sbjct: 712 ILQPGLMS-EVAGIGKIRFRDTLAETHKFFQRRHIENDRSVETATLNILDVE--SEIEPM 768
Query: 633 LLVGDQP-----EGDGVLDELVEM---------------WVRVLLYSAGKSRAELHVEQL 672
+ GD+ + + +L EM WV +L Y+A + HVEQL
Sbjct: 769 GVKGDRSKSVLFDASRLAKDLAEMEKTHNKDKWEILSKVWVELLCYAACHCDSTAHVEQL 828
Query: 673 ASGGELITFAWLLMA--------KNDCGDSRMKRI 699
+ GGELI F WLLMA + + GD+R K I
Sbjct: 829 SRGGELINFVWLLMAHFGLTDQFQINKGDARAKLI 863
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 332 LVQLQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALFLSTEKR--RYSKVDIAV 389
+++++LG +YD L+TK +L G R A T + AF +F + + D+ V
Sbjct: 284 IIEIELGFLYDALFTKIAILHTGIGTVSRVFASGTLVAAFIIFHKKPNKGTDFHGADVVV 343
Query: 390 TMSLFIGELLLEVCAVLIFMMSPWTWAWLKVRK------YNWLA-CFSWYLFSSRIGWPE 442
T +LF L+L+ ++L+F+ S WT A K +W CF+W L ++ W
Sbjct: 344 TYTLFAVGLVLDFISILLFLFSDWTCAAYSSLKDDPDELQSWQERCFNWLLKFRKLRWT- 402
Query: 443 NRPRWSNSMGQYNCVNRLVGISP 465
P+ + G + C G+ P
Sbjct: 403 --PQECHKTGMHKCTKE--GLKP 421
>AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804
Length = 803
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 19 VLLSFAMQVVLFFAGRFHVHITDKFTRVLISSTYLGADIIAIYALGGLS-RQEGNPQS-- 75
++LS +Q +L F K VLI S YL AD A YA+G +S QE +S
Sbjct: 22 IILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADWAADYAVGQISDSQEEEAESNK 81
Query: 76 ------IAFFWAPFLLIHLGGQDTITAFKMEDKNAWLTRSGKXXXXXXXXXXXXXNSIGR 129
+ FW+PFLL+HLGG DTITA +ED W SI
Sbjct: 82 PSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRHLFSLVCQAVATVYVILLSIP- 140
Query: 130 HKELLLAGIFMFATGFIKYFTRSWSLKWGSFESIENSTI 168
LL + MF G IKY R+ +L S + ++S +
Sbjct: 141 -NRLLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSML 178
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 332 LVQLQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALFLSTEKRRYSKVDIAVTM 391
+++++LG++YD L+TKA +L G RFIA+ + + LF +K +Y D+ +T
Sbjct: 276 IIEVELGLIYDCLFTKAEILHNWTGAVFRFIALGCLVASLCLFKMNKKDQYDGFDVVLTY 335
Query: 392 SLFIGELLLEVCAVLIFMMSPWTWAWLKVRKYNWLA-------CFSWYLFSSRIGWPENR 444
+L I + L+ A+L+F +S WT A L+ K + +W L + W ++
Sbjct: 336 ALLICGIALDSIALLMFCVSDWTIARLRKLKEDLEEKDTLTDRVLNWILDFKTLRWKRSK 395
Query: 445 P---------------RWSNSMGQYNCVNRLVGISP 465
RWS + YN + +GI P
Sbjct: 396 CSQDGHQVLNRNFMFRRWSEYVHAYNLIGFCLGIRP 431
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 57/206 (27%)
Query: 542 IQDVLTADFGTALLMMHMVTEVFLRQYPGN-----------------HSLVDVCRKLSNY 584
+Q V D+ ++L+ H+ TE+ L Q P + HS + + LS+Y
Sbjct: 584 LQYVTEKDYDQSILLWHIATEL-LYQKPIDKKVTEKEEHSTNREKEEHSNREFSKILSDY 642
Query: 585 MIYLLVNHPSMLPLNTSAISSIK------TAERMFQRRTNDISDVEHYKNIH-------- 630
M+YLL+ P+++ S I+ I+ A+ FQRR D S KN+
Sbjct: 643 MMYLLIVQPTLMS-AVSGIAKIRFRDTCEEAKDFFQRRHVDKSRYVK-KNLMKEACRAIL 700
Query: 631 ------DSLLV-GDQP----------------EGDGVLDELVEMWVRVLLYSAGKSRAEL 667
D + V GD+ EG+ + + + ++WV +L Y++ ++
Sbjct: 701 SVNTEIDPMAVKGDRSKSVLFDASVLAKELMNEGENMWEVVSKVWVELLCYASLHCDSQE 760
Query: 668 HVEQLASGGELITFAWLLMAKNDCGD 693
H QL+ GGELI F WLLMA GD
Sbjct: 761 HASQLSKGGELINFVWLLMAHFGLGD 786
>AT5G45460.1 | chr5:18417154-18419265 REVERSE LENGTH=704
Length = 703
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 19 VLLSFAMQVVLFFAGRFHVHITDKFTRVLISSTYLGADIIAIYALGGLSRQEGN------ 72
+ LS +Q L + ++I S+YL AD A +A+G +S+ +G
Sbjct: 22 IFLSLTLQAFLICFSPLRKRTPRRHLIIVIWSSYLLADWSANFAVGLISKNQGKDLKPDD 81
Query: 73 -PQ--SIAFFWAPFLLIHLGGQDTITAFKMEDKNAWLTRSGKXXXXXXXXXXXXXNSIGR 129
PQ + WAPFLL+HLGG DTITAF +ED WL S+
Sbjct: 82 PPQDKKLMALWAPFLLLHLGGPDTITAFALEDNALWLRNVFGLVFQAIAGVYVVLQSLP- 140
Query: 130 HKELLLAGIFMFATGFIKYFTRSWSLKWGSFESIENSTIR 169
L + + +F +G IKY R+ +L S + +S I+
Sbjct: 141 -NSLWVTILLVFISGTIKYLERTTALYSASLDKFRDSMIQ 179
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 332 LVQLQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALF--LSTEKRRYSKVDIAV 389
+++++LG +YD L+TK +L G R +A + + AF +F +S + R + D+ +
Sbjct: 284 IIEIELGFLYDALFTKNAVLHTVLGTVSRVVASGSLVAAFIIFHKISNKGRDFHGADVVI 343
Query: 390 TMSLFIGELLLEVCAVLIFMMSPWTWAWLKVRKYNWLACFSW 431
T LF L+L+ ++L+F+ S WT A L K + SW
Sbjct: 344 TYILFAVGLVLDFISILLFLFSDWTCAALSSLKDDPDEPLSW 385
>AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878
Length = 877
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 19 VLLSFAMQVVLFFAGRFHVHITDKFTRVLISSTYLGADIIAIYALGGLSRQEGN------ 72
++ S ++Q L F + K I S YL AD A +A G +S +G+
Sbjct: 22 LIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADWSANFAAGQISDSQGDDPEPGE 81
Query: 73 PQSIA---FFWAPFLLIHLGGQDTITAFKMEDKNAWLTRSGKXXXXXXXXXXXXXNSIGR 129
P+ A FW PFLL+HLGG DTITA +ED WL S+
Sbjct: 82 PKKSAELFAFWVPFLLLHLGGPDTITALALEDNELWLRHLLGLFFQSVATVYVLLQSLPN 141
Query: 130 H--KELLLAGIFMFATGFIKYFTRSWSLKWGSFESIENSTIR 169
K +LL +FATG IKY R+ +L S + ++S I+
Sbjct: 142 ALWKPILL----VFATGVIKYVERTLALYLASLDKFKDSMIQ 179
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 332 LVQLQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALFLSTEKRRYSKVDIAVTM 391
+++++L +Y LYTKA +L G RFIA+ A +F K+ YS D+ +T
Sbjct: 276 ILEVELNFIYAALYTKAEILHNWIGFLFRFIALGCLAAALRIFQYKSKKDYSGFDVGLTY 335
Query: 392 SLFIGELLLEVCAVLIFMMSPWTWAWLKVRK 422
+L +G + L+ A+++F S WT+ L+ K
Sbjct: 336 ALLLGGIALDCIALIMFCASDWTFVRLRKMK 366
>AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799
Length = 798
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 52/214 (24%)
Query: 525 QDTEYLEWRYVGSFLEQIQDVLTADFGTALLMMHMVTEVFLRQYPGN---------HSLV 575
+D++ +E V + + I+ V D+ +LL+ H+ TE+ ++ G +
Sbjct: 574 RDSKLME---VDTLMRYIEKV---DYDQSLLLWHIATELCFQKEEGGKMEKLSREGYDDR 627
Query: 576 DVCRKLSNYMIYLLVNHPSMLPLNTSAISSIK------TAERMFQ-RRTNDISDVEHY-- 626
+ + +S+YM+YLL+ P ++ + I +I+ AER F+ R+ D+ D++
Sbjct: 628 EFSKIISDYMMYLLIMRPKLMS-EVAGIGTIRFRDTKAEAERFFKGRQIKDLRDMKRASE 686
Query: 627 ------KNIHDSLLVGDQPEG---------------------DGVLDELVEMWVRVLLYS 659
+I L+ GD+ + DG L ++WV +L Y+
Sbjct: 687 TVLLVSNDIEPILVKGDRSKSVLFDASMLAKELQNLKESSNEDGKWRVLSKVWVELLCYA 746
Query: 660 AGKSRAELHVEQLASGGELITFAWLLMAKNDCGD 693
A +A HV QL+ GGEL+ F WLLMA GD
Sbjct: 747 ASHCKATEHVAQLSRGGELLNFVWLLMAHFGLGD 780
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 19 VLLSFAMQVVLFFAGRFHVHITDKFTRVLISSTYLGADIIAIYALGGLSRQEG------N 72
V++S Q L F + K ++ + YL AD A YA+ +++ +G +
Sbjct: 21 VIMSLLFQTSLIFLAPMRKRTSKKLLAAVLWTAYLLADWTANYAVSQITKNQGKETEPGD 80
Query: 73 P---QSIAFFWAPFLLIHLGGQDTITAFKMEDKNAWLTRSGKXXXXXXXXXXXXXNSIGR 129
P + + WAPFLL+HLGG DTITA +ED W S+
Sbjct: 81 PPKNKKLLALWAPFLLLHLGGPDTITALALEDNALWQRHLFGLVSQALAGVYAVVQSL-- 138
Query: 130 HKELLLAGI-FMFATGFIKYFTRSWSLKWGSFESIENSTIRHMYEIQLPEASNGSN 184
+ +L I +F TG IKY R+ +L S + ++ L A GSN
Sbjct: 139 -ENVLWPPITLLFITGTIKYVERTRALYSASLDKFKDR--------MLQRADAGSN 185
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 20/129 (15%)
Query: 332 LVQLQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALF----LSTEKRRYSKVDI 387
+++ +LG +Y+ +YTK +L G R I+ + + +F +F L +E + D+
Sbjct: 275 IIETELGFLYESMYTKTAILHTGIGTLFRLISFGSLLSSFFVFHRRPLKSED--FHGADV 332
Query: 388 AVTMSLFIGELLLEVCAVLIFMMSPWTWAWLKVRK-------YNWLACFSWYLFSSRIGW 440
+T LFI + L++ +++IF++S WT+A L+ K + + F+W+L
Sbjct: 333 VITYVLFIVGIALDLASMVIFLLSDWTFAVLRNLKDDPEEKSTSIDSLFNWFL------- 385
Query: 441 PENRPRWSN 449
+PRW
Sbjct: 386 EFRKPRWKK 394
>AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752
Length = 751
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 332 LVQLQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALFLSTEKR--RYSKVDIAV 389
+++ +L +Y+ LYTK +L G+ RFI++ + + AF ++ + + K DI +
Sbjct: 253 IIEAELDFIYEGLYTKGSVLHSWVGLVSRFISLGSLLSAFTIYHYRHNKIQEFHKADIVI 312
Query: 390 TMSLFIGELLLEVCAVLIFMMSPWTWAWLKVRKYNWLACFS-------WYLFSSRIGW 440
T +LF+ + L+V ++ +FM+S WT A L K + +S W LF R W
Sbjct: 313 TYTLFLVGIALDVISIHMFMVSDWTTAILAKLKDDPDERYSGKDHILNWILFLKRPKW 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 64 GGLSRQEGNPQS--IAFFWAPFLLIHLGGQDTITAFKMEDKNAWLTRSGKXXXXXXXXXX 121
G + + PQ+ + WAPFLL+HLGG DTITAF +ED W
Sbjct: 68 GKYLKPDDPPQNKKLVALWAPFLLLHLGGPDTITAFSLEDNALWNRHFLGLVFQALAGVY 127
Query: 122 XXXNSIGRHKELLLAGIFMFATGFIKYFTRSWSLKWGSFESIENSTIR 169
S+ +++ + +F G KY R+ +L S + NS ++
Sbjct: 128 VVVQSLPNVLSVII--LLLFIAGTSKYLERTIALYLASSDKYRNSMLQ 173
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,716,971
Number of extensions: 590448
Number of successful extensions: 1726
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1712
Number of HSP's successfully gapped: 15
Length of query: 737
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 631
Effective length of database: 8,200,473
Effective search space: 5174498463
Effective search space used: 5174498463
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)