BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0337500 Os01g0337500|AY333187
(773 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G15690.1 | chr1:5399115-5402185 FORWARD LENGTH=771 1018 0.0
AT1G16780.1 | chr1:5739468-5743818 REVERSE LENGTH=852 387 e-108
AT1G78920.1 | chr1:29672340-29676761 FORWARD LENGTH=803 375 e-104
>AT1G15690.1 | chr1:5399115-5402185 FORWARD LENGTH=771
Length = 770
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/758 (67%), Positives = 580/758 (76%), Gaps = 12/758 (1%)
Query: 16 GIAFAVWQWLLVSRVKVSPYSXXXXXXXXXXXXXXVFRPXXXXXXXXXXXXXXXXXXXXX 75
GIAF+++QW +VSRVK++
Sbjct: 23 GIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNG------------YGDYLIEEEEGVN 70
Query: 76 XXXXMARCAEIQSAIRVGANSFLFTQYKYXXXXXXXXXXXXXXXXGSVHRFSTESQPCQY 135
+A+CAEIQ+AI GA SFLFT+YKY GSV FST+++PC Y
Sbjct: 71 DQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDNKPCTY 130
Query: 136 TRGKACKPALANAVFSTIAFLLGAATSVASGFLGMRIATAANARTTVEARRGIGPAFAAA 195
+ CKPALA A FSTIAF+LGA TSV SGFLGM+IAT ANARTT+EAR+G+G AF A
Sbjct: 131 DTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGKAFIVA 190
Query: 196 FRSGAVMGFXXXXXXXXXXYVAIKVFGLYYGDDWEGLYESITGYGLGGSSMALFGRVGGG 255
FRSGAVMGF Y+ I VF +YYGDDWEGL+E+ITGYGLGGSSMALFGRVGGG
Sbjct: 191 FRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGLGGSSMALFGRVGGG 250
Query: 256 IYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAA 315
IYTKAADVGADLVGK+ERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE++CAA
Sbjct: 251 IYTKAADVGADLVGKIERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAA 310
Query: 316 LFVGSISSFGADHNFAAVSYPLLISSAGLIVCLITTLFATDLYRVKTVDGVAPALKLQLL 375
L V SISSFG +H+F A+ YPLLISS G++VCLITTLFATD + +K V + PALK QL+
Sbjct: 311 LVVASISSFGINHDFTAMCYPLLISSMGILVCLITTLFATDFFEIKLVKEIEPALKNQLI 370
Query: 376 ISXXXXXXXXXXXXXXALPHEFTMFDFGEVKRVKNWHLFFCVTIGLWAGLAIGFTTEYFT 435
IS LP FT+F+FG K VKNW LF CV +GLWAGL IGF TEY+T
Sbjct: 371 ISTVIMTVGIAIVSWVGLPTSFTIFNFGTQKVVKNWQLFLCVCVGLWAGLIIGFVTEYYT 430
Query: 436 SNAYSPVRDVADSCRTGAATNVIFGLALGYKSVIVPVFAIAVSIYVSFTLASIYGIAVAA 495
SNAYSPV+DVADSCRTGAATNVIFGLALGYKSVI+P+FAIA+SI+VSF+ A++YG+AVAA
Sbjct: 431 SNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGVAVAA 490
Query: 496 LGMLSTVATGLAIDAYGPISDNAGGIAEMAGMSHRIRQRTDALDAAGNTTAAIGKGFAIG 555
LGMLST+ATGLAIDAYGPISDNAGGIAEMAGMSHRIR+RTDALDAAGNTTAAIGKGFAIG
Sbjct: 491 LGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIG 550
Query: 556 SAALVSLALFGAFVSRAGMAVINVLSPKVFVGLVVGAMLPYWFSAMTMKSVGSAALKMVE 615
SAALVSLALFGAFVSRAG+ ++VL+PKV +GL+VGAMLPYWFSAMTMKSVGSAALKMVE
Sbjct: 551 SAALVSLALFGAFVSRAGIHTVDVLTPKVIIGLLVGAMLPYWFSAMTMKSVGSAALKMVE 610
Query: 616 EVRRQFAAIPGLMEGRATPDYASCVRISTDASLREMMXXXXXXXXXXXXXXTFFXXXXXX 675
EVRRQF IPGLMEG A PDYA+CV+ISTDAS++EM+ FF
Sbjct: 611 EVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGCLVMLTPLIVGFFFGVETLS 670
Query: 676 XXXXXXXXXXXXXXISASNSGGAWDNAKKYIEAGASDHAKALGPKGSDAHKAAVIGDTIG 735
ISASN+GGAWDNAKKYIEAG S+HAK+LGPKGS+ HKAAVIGDTIG
Sbjct: 671 GVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGVSEHAKSLGPKGSEPHKAAVIGDTIG 730
Query: 736 DPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFK 773
DPLKDTSGPSLNILIKLMAVESLVFAPFFA HGG++FK
Sbjct: 731 DPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGILFK 768
>AT1G16780.1 | chr1:5739468-5743818 REVERSE LENGTH=852
Length = 851
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 267/730 (36%), Positives = 359/730 (49%), Gaps = 79/730 (10%)
Query: 85 EIQSAIRVGANSFLFTQYKYXXXXXXXXXXXXXXXXGSVHRFSTESQPCQYTRGKACKPA 144
+I AIR GA FL TQY ++ F + P Q G
Sbjct: 150 QISDAIRDGAEGFLRTQYGTISKMAFLLAFVIL----CIYLFRNLT-PQQEASGLG---R 201
Query: 145 LANAVFSTIAFLLGAATSVASGFLGMRIATAANARTTVEARRGIGPAFAAAFRSGAVMGF 204
+A + AFLLGA S +G++GM ++ AN R + ARR A A R+G
Sbjct: 202 TMSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAL 261
Query: 205 XXXXXXXXXXYVAIKVFGLYYGDDWEG------LYESITGYGLGGSSMALFGRVGGGIYT 258
+ F ++ D G L + GYG G S +ALF ++GGGIYT
Sbjct: 262 VVVGMAVIGIAILYSTFYVWLDVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYT 321
Query: 259 KAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFV 318
K ADVGADLVGKVE IPEDDPRNPAVIAD VGDNVGD A G+DLF S A +A+ +
Sbjct: 322 KGADVGADLVGKVEHGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMIL 381
Query: 319 GSI--SSFGADHNFAAVSYPLLISSAGLIVCLITTLFATDLYRVKTVDGVA-PALKLQLL 375
G + + +PL++ S L++ I L V P + LQ
Sbjct: 382 GGTMAQKCKIEDPSGFILFPLVVHSFDLVISSIGILSIKGTRNASVKSPVEDPMVVLQ-- 439
Query: 376 ISXXXXXXXXXXXXXXALPHEFTMFDFGEVKR--------VKNW-HLFFCVTIGLWAGLA 426
+L + FG R W + F C +G+
Sbjct: 440 -------------KGYSLTIILAVLTFGASTRWLLYTEQAPSAWLNFFMCGLVGIITAYV 486
Query: 427 IGFTTEYFTSNAYSPVRDVADSCRTGAATNVIFGLALGYKSVIVPVFAIAVSIYVSFTLA 486
+ + Y+T Y PVR +A + TG TN+I G++LG +S +PV I+V+I +F L
Sbjct: 487 FVWISRYYTDYKYEPVRTLALASSTGHGTNIIAGVSLGLESTALPVLVISVAIISAFWLG 546
Query: 487 S--------------IYGIAVAALGMLSTVATGLAIDAYGPISDNAGGIAEMAGMSHRIR 532
+ ++G AVA +GMLST A L +D +GPI+DNAGGI EM+ +R
Sbjct: 547 NTSGLIDEKGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVR 606
Query: 533 QRTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV------SRAGMAVINVLSPKVFV 586
+ TD LDA GNTT A KGFAIGSAAL S LF A++ + +++ P+VF+
Sbjct: 607 EITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFANVSFKEVDIAIPEVFI 666
Query: 587 GLVVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFAAIPGLMEGRATPDYASCVRISTDA 646
G ++GAML + FSA +VG A ++V EVRRQF PG+M+ + PDY CV I +
Sbjct: 667 GGLLGAMLIFLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASS 726
Query: 647 SLREMMXXXXXXXXXXXXXXTFFX------------XXXXXXXXXXXXXXXXXXXISASN 694
+LREM+ F + +
Sbjct: 727 ALREMIKPGALAIISPIAVGFVFRILGYYTGQPLLGAKVVAAMLMFATVCGILMALFLNT 786
Query: 695 SGGAWDNAKKYIEAGASDHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 754
+GGAWDNAKKYIE G ALG KGSD+HKAAV GDT+GDP KDT+GPS+++LIK++A
Sbjct: 787 AGGAWDNAKKYIETG------ALGGKGSDSHKAAVTGDTVGDPFKDTAGPSIHVLIKMLA 840
Query: 755 VESLVFAPFF 764
+LV AP F
Sbjct: 841 TITLVMAPIF 850
>AT1G78920.1 | chr1:29672340-29676761 FORWARD LENGTH=803
Length = 802
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 270/733 (36%), Positives = 364/733 (49%), Gaps = 85/733 (11%)
Query: 85 EIQSAIRVGANSFLFTQYKYXXXXXXXXXXXXXXXXGSVHRFSTESQPCQYTRGKACKPA 144
EI AIR GA F TQY ++ F + + P Q G
Sbjct: 101 EISDAIRDGAEGFFRTQYSTISKMAILLAFVIL----CIYLFRSLT-PQQEAAGLGRA-- 153
Query: 145 LANAVFSTIAFLLGAATSVASGFLGMRIATAANARTTVEARRGIGPAFAAAFRSGAVMGF 204
+A + AFLLGA S +G++GM ++ AN R + ARR A A R+G
Sbjct: 154 -MSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAL 212
Query: 205 XXXXXXXXXXYVAIKVFGLYYGDDWEG------LYESITGYGLGGSSMALFGRVGGGIYT 258
+ F ++ G G L + GYG G S +ALF ++GGGIYT
Sbjct: 213 VVVGMAVIGIAILYSTFYVWLGVGSPGSMNVTDLPLLLVGYGFGASFVALFAQLGGGIYT 272
Query: 259 KAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYA-ESTCAALF 317
K ADVGADLVGKVE+ IPEDDPRNPAVIAD VGDNVGD A G+DLF S A E A +
Sbjct: 273 KGADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMIL 332
Query: 318 VGSISSFGADHNFAA-VSYPLLISSAGLIVCLITTLFATDLYRVKTVDGVA-PALKLQLL 375
G+++ + + + +PL++ S LI+ I L V P LQ
Sbjct: 333 GGTMAKKCKIEDPSGFILFPLVVHSFDLIISSIGILSIKGTRDASVKSPVEDPMAVLQ-- 390
Query: 376 ISXXXXXXXXXXXXXXALPHEFTMFDFGEVKRVKNWHLF------------FCVTIGLWA 423
+L + FG R W L+ C +G+
Sbjct: 391 -------------KGYSLTIILAVITFGASTR---WLLYTEQAPSAWFNFALCGLVGIIT 434
Query: 424 GLAIGFTTEYFTSNAYSPVRDVADSCRTGAATNVIFGLALGYKSVIVPVFAIAVSIYVSF 483
+ ++Y+T + PVR +A + TG TN+I G++LG +S +PV I+V+I ++
Sbjct: 435 AYIFVWISKYYTDYKHEPVRTLALASSTGHGTNIIAGVSLGLESTALPVLTISVAIISAY 494
Query: 484 TLAS--------------IYGIAVAALGMLSTVATGLAIDAYGPISDNAGGIAEMAGMSH 529
L + ++G AVA +GMLST A L +D +GPI+DNAGGI EM+
Sbjct: 495 WLGNTSGLVDENGIPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPE 554
Query: 530 RIRQRTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV------SRAGMAVINVLSPK 583
+R+ TD LDA GNTT A KGFAIGSAAL S LF A++ + +++ P+
Sbjct: 555 SVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFANVSFKEVDIAIPE 614
Query: 584 VFVGLVVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFAAIPGLMEGRATPDYASCVRIS 643
VFVG ++GAML + FSA +VG A ++V EVRRQF PG+ME + PDY+ CV I
Sbjct: 615 VFVGGLLGAMLIFLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYSRCVAIV 674
Query: 644 TDASLREMMXXXXXXXXXXXXXXTFFX------------XXXXXXXXXXXXXXXXXXXIS 691
A+LREM+ F +
Sbjct: 675 ASAALREMIKPGALAIASPIVVGLVFRILGYYTGQPLLGAKVVASMLMFATVCGILMALF 734
Query: 692 ASNSGGAWDNAKKYIEAGASDHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIK 751
+ +GGAWDNAKKYIE G ALG KGS+AHKAAV GDT+GDP KDT+GPS+++LIK
Sbjct: 735 LNTAGGAWDNAKKYIETG------ALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIK 788
Query: 752 LMAVESLVFAPFF 764
++A +LV AP F
Sbjct: 789 MLATITLVMAPVF 801
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,259,840
Number of extensions: 440219
Number of successful extensions: 996
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 983
Number of HSP's successfully gapped: 7
Length of query: 773
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 667
Effective length of database: 8,200,473
Effective search space: 5469715491
Effective search space used: 5469715491
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 116 (49.3 bits)