BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0326100 Os01g0326100|AK067102
(93 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11290.1 | chr4:6869993-6871476 FORWARD LENGTH=327 55 6e-09
AT5G15180.1 | chr5:4930561-4932211 FORWARD LENGTH=330 55 9e-09
AT1G77100.1 | chr1:28965772-28967066 REVERSE LENGTH=337 51 1e-07
AT5G64120.1 | chr5:25659551-25660946 REVERSE LENGTH=329 50 2e-07
AT1G05260.1 | chr1:1529827-1531271 FORWARD LENGTH=327 50 3e-07
AT2G41480.1 | chr2:17296986-17298729 REVERSE LENGTH=342 49 4e-07
AT5G39580.1 | chr5:15847281-15849027 REVERSE LENGTH=320 49 5e-07
AT4G26010.1 | chr4:13200653-13201688 FORWARD LENGTH=311 49 5e-07
AT1G49570.1 | chr1:18347077-18348712 FORWARD LENGTH=351 49 5e-07
AT3G01190.1 | chr3:67236-68477 REVERSE LENGTH=322 48 1e-06
AT5G17820.1 | chr5:5888195-5890101 REVERSE LENGTH=314 48 1e-06
AT1G71695.1 | chr1:26964359-26966557 FORWARD LENGTH=359 48 1e-06
AT3G32980.1 | chr3:13526404-13529949 REVERSE LENGTH=353 48 1e-06
AT3G03670.1 | chr3:901985-903349 REVERSE LENGTH=322 47 2e-06
AT3G21770.1 | chr3:7673345-7674661 FORWARD LENGTH=330 46 4e-06
AT4G25980.1 | chr4:13189393-13191507 FORWARD LENGTH=372 46 5e-06
AT5G58400.1 | chr5:23605357-23606967 REVERSE LENGTH=326 45 7e-06
AT4G30170.1 | chr4:14762922-14764482 FORWARD LENGTH=326 45 9e-06
>AT4G11290.1 | chr4:6869993-6871476 FORWARD LENGTH=327
Length = 326
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 21 SAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVR 69
A LK+GFY++TCP N +AAGLIR+HFHDCFVR
Sbjct: 22 EAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVR 70
>AT5G15180.1 | chr5:4930561-4932211 FORWARD LENGTH=330
Length = 329
Score = 54.7 bits (130), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 1 MAMKCLL----VFFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAA 56
M + C L ++ L++ F V GLKVGFY++ CP KN+ +AA
Sbjct: 6 MTISCFLFLQVIYCLLSSFAPTNVQ-GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAA 64
Query: 57 GLIRLHFHDCFVR 69
L+R+ FHDCFVR
Sbjct: 65 PLLRMFFHDCFVR 77
>AT1G77100.1 | chr1:28965772-28967066 REVERSE LENGTH=337
Length = 336
Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 21 SAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFV 68
+A L+ GFY+ETCPS N+ G AA L+RL FHDCFV
Sbjct: 38 AAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFV 85
>AT5G64120.1 | chr5:25659551-25660946 REVERSE LENGTH=329
Length = 328
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 5 CLLVFFL---VAFFPGAAVS-----AGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAA 56
CLL+ FL + G A + +G ++GFY TCP F ++ +A
Sbjct: 8 CLLITFLNCLIISVHGQATARPGPVSGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAP 67
Query: 57 GLIRLHFHDCFVR 69
G++R+HFHDCFV+
Sbjct: 68 GILRMHFHDCFVQ 80
>AT1G05260.1 | chr1:1529827-1531271 FORWARD LENGTH=327
Length = 326
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 3 MKCLLV------FFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAA 56
M CL+ FFLV + A L++ FY +CP+ N +AA
Sbjct: 1 MNCLIAIALSVSFFLVGIV--GPIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAA 58
Query: 57 GLIRLHFHDCFVR 69
LIR+HFHDCFVR
Sbjct: 59 ALIRMHFHDCFVR 71
>AT2G41480.1 | chr2:17296986-17298729 REVERSE LENGTH=342
Length = 341
Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 5 CLLVFFLVAFFPGAAV-SAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHF 63
C ++ ++ G V S LK G+Y+ +CP F ++ ++ GL+RLHF
Sbjct: 22 CYIMIIMLVLVLGKEVRSQLLKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHF 81
Query: 64 HDCFVR 69
HDCFV+
Sbjct: 82 HDCFVQ 87
>AT5G39580.1 | chr5:15847281-15849027 REVERSE LENGTH=320
Length = 319
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 6 LLVFFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHD 65
L++ FL A G ++GFY+ TCP+ F ++ VA GL+R+H HD
Sbjct: 9 LVIVFLSCLI--AVYGQGTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHD 66
Query: 66 CFVR 69
CFV+
Sbjct: 67 CFVQ 70
>AT4G26010.1 | chr4:13200653-13201688 FORWARD LENGTH=311
Length = 310
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 8 VFFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCF 67
+FFL F +A+ A L+ GFY+ +CP F+++ + A +R+ FHDCF
Sbjct: 7 LFFLFCFLAPSAL-AQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCF 65
Query: 68 VR 69
VR
Sbjct: 66 VR 67
>AT1G49570.1 | chr1:18347077-18348712 FORWARD LENGTH=351
Length = 350
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 17 GAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVR 69
G +++ L FY+ +CP FK++S +AA L+RLHFHDCFV
Sbjct: 41 GHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVN 93
>AT3G01190.1 | chr3:67236-68477 REVERSE LENGTH=322
Length = 321
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 9 FFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFV 68
FLV F A S GLKVGFY++TCP + A L+R+ FHDCFV
Sbjct: 12 LFLVLLF-AQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFV 70
Query: 69 R 69
R
Sbjct: 71 R 71
>AT5G17820.1 | chr5:5888195-5890101 REVERSE LENGTH=314
Length = 313
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 6 LLVFFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHD 65
LLV F + FP A A L+VGFY+++CP F V A L+R+HFHD
Sbjct: 10 LLVLFFI--FPIAF--AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHD 65
Query: 66 CFVR 69
CFV+
Sbjct: 66 CFVK 69
>AT1G71695.1 | chr1:26964359-26966557 FORWARD LENGTH=359
Length = 358
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 18 AAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVR 69
A + GL FY + CP FK + G+AA ++R+HFHDCFV+
Sbjct: 38 APIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQ 89
>AT3G32980.1 | chr3:13526404-13529949 REVERSE LENGTH=353
Length = 352
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 MAMKCLLVFFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIR 60
M + CLL+ ++ SA L FY+ TCPS +++ +AA ++R
Sbjct: 15 MTLGCLLLHSSIS-------SAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILR 67
Query: 61 LHFHDCFV 68
LHFHDCFV
Sbjct: 68 LHFHDCFV 75
>AT3G03670.1 | chr3:901985-903349 REVERSE LENGTH=322
Length = 321
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 22 AGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVRVRLHLSRSILVS 81
A LK FY+E+CP+ F + + A L R+HFHDCFV+ S+L+
Sbjct: 21 AQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQ---GCDASLLID 77
Query: 82 FITALFGVRTA 92
T+ + A
Sbjct: 78 PTTSQLSEKNA 88
>AT3G21770.1 | chr3:7673345-7674661 FORWARD LENGTH=330
Length = 329
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 21 SAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVR 69
A L++ FY ++CP+ N +AA LIR+HFHDCFVR
Sbjct: 26 EAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVR 74
>AT4G25980.1 | chr4:13189393-13191507 FORWARD LENGTH=372
Length = 371
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 4 KCLLVFFLVAFFPGAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHF 63
K L LV F G ++ A L+VGFY+ TCP ++ + A L+RLHF
Sbjct: 52 KMRLALSLVTVFFGISL-ANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHF 110
Query: 64 HDCFVR 69
HDCFV
Sbjct: 111 HDCFVE 116
>AT5G58400.1 | chr5:23605357-23606967 REVERSE LENGTH=326
Length = 325
Score = 45.1 bits (105), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 17 GAAVSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVRVRLHLSR 76
G+ A L+ FY+++CPS +AA L+RL FHDCFV
Sbjct: 23 GSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVN---GCDA 79
Query: 77 SILVSFITALFGVRTA 92
SIL+ + G +TA
Sbjct: 80 SILLDDTRSFLGEKTA 95
>AT4G30170.1 | chr4:14762922-14764482 FORWARD LENGTH=326
Length = 325
Score = 44.7 bits (104), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 20 VSAGLKVGFYNETCPSXXXXXXXXXXXXFKNNSGVAAGLIRLHFHDCFVR 69
VSA L+ GFY +CP+ F+ A +RL FHDCFVR
Sbjct: 23 VSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVR 72
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.335 0.144 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,501,419
Number of extensions: 38448
Number of successful extensions: 179
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 190
Number of HSP's successfully gapped: 18
Length of query: 93
Length of database: 11,106,569
Length adjustment: 64
Effective length of query: 29
Effective length of database: 9,351,945
Effective search space: 271206405
Effective search space used: 271206405
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 104 (44.7 bits)