BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0322300 Os01g0322300|Os01g0322300
         (65 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46860.1  | chr2:19253843-19255060 FORWARD LENGTH=217           92   4e-20
AT3G53620.1  | chr3:19881491-19883308 FORWARD LENGTH=217           90   2e-19
AT1G01050.1  | chr1:31382-32670 REVERSE LENGTH=213                 88   8e-19
AT2G18230.1  | chr2:7932139-7933560 REVERSE LENGTH=219             87   2e-18
AT4G01480.1  | chr4:626539-627758 FORWARD LENGTH=217               81   1e-16

>AT2G46860.1 | chr2:19253843-19255060 FORWARD LENGTH=217
          Length = 216

 Score = 92.4 bits (228), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/63 (66%), Positives = 51/63 (80%)

Query: 3   VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
           VCADDPE+ H+ DI +L+PH LQEI+R FEDYKKNE KKV  + FLP  +A +AIQYS+D
Sbjct: 145 VCADDPEYKHFTDIKQLAPHRLQEIRRFFEDYKKNENKKVAVNDFLPSESAHEAIQYSMD 204

Query: 63  LYA 65
           LYA
Sbjct: 205 LYA 207



>AT3G53620.1 | chr3:19881491-19883308 FORWARD LENGTH=217
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 50/63 (79%)

Query: 3   VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
           VCADDPE+ HYNDI+EL PH + EI+R FEDYKKNE K+V  + FLP   A DA+Q+S+D
Sbjct: 145 VCADDPEYRHYNDISELPPHRMAEIRRFFEDYKKNENKEVAVNDFLPATAAYDAVQHSMD 204

Query: 63  LYA 65
           LYA
Sbjct: 205 LYA 207



>AT1G01050.1 | chr1:31382-32670 REVERSE LENGTH=213
          Length = 212

 Score = 88.2 bits (217), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 48/63 (76%)

Query: 3   VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
           VC DDPE+ HY DI EL PH L EI+R FEDYKKNE K+V  + FLP  +A +AIQYS+D
Sbjct: 141 VCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEVAVNDFLPSESAVEAIQYSMD 200

Query: 63  LYA 65
           LYA
Sbjct: 201 LYA 203



>AT2G18230.1 | chr2:7932139-7933560 REVERSE LENGTH=219
          Length = 218

 Score = 87.0 bits (214), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 48/65 (73%)

Query: 1   MPVCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYS 60
           + VCADDPE  HY DI EL PH L EI+R FEDYKKNE KKV  +AFLP   A DAI+ S
Sbjct: 145 IAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLPAQAAIDAIKDS 204

Query: 61  IDLYA 65
           +DLYA
Sbjct: 205 MDLYA 209



>AT4G01480.1 | chr4:626539-627758 FORWARD LENGTH=217
          Length = 216

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 46/63 (73%)

Query: 3   VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
           VC DDPE+ H  +INEL PH L EI+R FEDYKKNE K+V  + FL    A +AIQYS+D
Sbjct: 145 VCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNENKEVAVNDFLQPGPAIEAIQYSMD 204

Query: 63  LYA 65
           LYA
Sbjct: 205 LYA 207



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,464,635
Number of extensions: 46866
Number of successful extensions: 162
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 5
Length of query: 65
Length of database: 11,106,569
Length adjustment: 38
Effective length of query: 27
Effective length of database: 10,064,761
Effective search space: 271748547
Effective search space used: 271748547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 104 (44.7 bits)